Protein–RNA interactions for Protein: O15457

MSH4, MutS protein homolog 4, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4O15457 RPS4XP6-201ENST00000477670 797 ntBASIC3.57□□□□□ -1.84
MSH4O15457 MTCO1P6-201ENST00000481192 1384 ntBASIC3.57□□□□□ -1.84
MSH4O15457 DCAF13P1-201ENST00000495256 1330 ntBASIC3.57□□□□□ -1.84
MSH4O15457 AC026427.2-201ENST00000506228 536 ntBASIC3.57□□□□□ -1.84
MSH4O15457 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC3.57□□□□□ -1.84
MSH4O15457 AC023141.12-201ENST00000512399 199 ntBASIC3.57□□□□□ -1.84
MSH4O15457 SNORA74D-201ENST00000516404 141 ntBASIC3.57□□□□□ -1.84
MSH4O15457 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.57□□□□□ -1.84
MSH4O15457 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.57□□□□□ -1.84
MSH4O15457 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
MSH4O15457 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC3.57□□□□□ -1.84
MSH4O15457 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC3.57□□□□□ -1.84
MSH4O15457 AC124283.4-201ENST00000581815 456 ntBASIC3.57□□□□□ -1.84
MSH4O15457 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.57□□□□□ -1.84
MSH4O15457 AC124312.4-201ENST00000605533 310 ntBASIC3.57□□□□□ -1.84
MSH4O15457 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.57□□□□□ -1.84
MSH4O15457 AC073476.4-201ENST00000628409 72 ntBASIC3.57□□□□□ -1.84
MSH4O15457 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.57□□□□□ -1.84
MSH4O15457 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
MSH4O15457 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
MSH4O15457 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
MSH4O15457 AC073055.1-201ENST00000456901 1621 ntBASIC3.56□□□□□ -1.84
MSH4O15457 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.56□□□□□ -1.84
MSH4O15457 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
MSH4O15457 XIAPP3-201ENST00000312918 795 ntBASIC3.56□□□□□ -1.84
MSH4O15457 RNU1-75P-201ENST00000347264 129 ntBASIC3.56□□□□□ -1.84
MSH4O15457 MIR483-201ENST00000385070 76 ntBASIC3.56□□□□□ -1.84
MSH4O15457 AC007899.1-201ENST00000412776 775 ntBASIC3.56□□□□□ -1.84
MSH4O15457 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC3.56□□□□□ -1.84
MSH4O15457 RPL23AP69-201ENST00000431134 458 ntBASIC3.56□□□□□ -1.84
MSH4O15457 AL513175.1-201ENST00000431492 780 ntBASIC3.56□□□□□ -1.84
MSH4O15457 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC3.56□□□□□ -1.84
MSH4O15457 ZNF736P6Y-201ENST00000447526 1213 ntBASIC3.56□□□□□ -1.84
MSH4O15457 BX276092.4-201ENST00000452056 248 ntBASIC3.56□□□□□ -1.84
MSH4O15457 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.56□□□□□ -1.84
MSH4O15457 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC3.56□□□□□ -1.84
MSH4O15457 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
MSH4O15457 RPS3AP43-201ENST00000479743 781 ntBASIC3.56□□□□□ -1.84
MSH4O15457 RPS27P23-201ENST00000487608 251 ntBASIC3.56□□□□□ -1.84
MSH4O15457 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC3.56□□□□□ -1.84
MSH4O15457 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.56□□□□□ -1.84
MSH4O15457 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
MSH4O15457 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.56□□□□□ -1.84
MSH4O15457 RNU1-143P-201ENST00000516296 146 ntBASIC3.56□□□□□ -1.84
MSH4O15457 RNU6-1231P-201ENST00000517185 103 ntBASIC3.56□□□□□ -1.84
MSH4O15457 HMGB1P1-201ENST00000522557 636 ntBASIC3.56□□□□□ -1.84
MSH4O15457 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC3.56□□□□□ -1.84
MSH4O15457 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC3.56□□□□□ -1.84
MSH4O15457 AC004024.1-201ENST00000549244 247 ntBASIC3.56□□□□□ -1.84
MSH4O15457 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.56□□□□□ -1.84
MSH4O15457 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC3.56□□□□□ -1.84
MSH4O15457 PRELID3BP8-201ENST00000604148 295 ntBASIC3.56□□□□□ -1.84
MSH4O15457 U1.23-201ENST00000610293 146 ntBASIC3.56□□□□□ -1.84
MSH4O15457 RNU1-68P-201ENST00000615382 146 ntBASIC3.56□□□□□ -1.84
MSH4O15457 U1.39-201ENST00000621562 146 ntBASIC3.56□□□□□ -1.84
MSH4O15457 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC3.56□□□□□ -1.84
MSH4O15457 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC3.56□□□□□ -1.84
MSH4O15457 AL356118.1-201ENST00000635272 1078 ntBASIC3.56□□□□□ -1.84
MSH4O15457 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.56□□□□□ -1.84
MSH4O15457 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.56□□□□□ -1.84
MSH4O15457 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
MSH4O15457 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.56□□□□□ -1.84
MSH4O15457 AC107081.3-201ENST00000612715 2034 ntBASIC3.56□□□□□ -1.84
MSH4O15457 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
MSH4O15457 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.55□□□□□ -1.84
MSH4O15457 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.55□□□□□ -1.84
MSH4O15457 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.55□□□□□ -1.84
MSH4O15457 OR1S2-201ENST00000302592 978 ntBASIC3.55□□□□□ -1.84
MSH4O15457 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
MSH4O15457 SNORD65C-201ENST00000390962 71 ntBASIC3.55□□□□□ -1.84
MSH4O15457 DSTNP4-201ENST00000399472 474 ntBASIC3.55□□□□□ -1.84
MSH4O15457 RNU6-77P-201ENST00000410554 91 ntBASIC3.55□□□□□ -1.84
MSH4O15457 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.55□□□□□ -1.84
MSH4O15457 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC3.55□□□□□ -1.84
MSH4O15457 AC246680.2-201ENST00000422106 389 ntBASIC3.55□□□□□ -1.84
MSH4O15457 AC006994.1-201ENST00000438212 839 ntBASIC3.55□□□□□ -1.84
MSH4O15457 AC127537.2-201ENST00000439258 465 ntBASIC3.55□□□□□ -1.84
MSH4O15457 AL158053.1-201ENST00000441503 453 ntBASIC3.55□□□□□ -1.84
MSH4O15457 GXYLT1P1-201ENST00000446657 490 ntBASIC3.55□□□□□ -1.84
MSH4O15457 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC3.55□□□□□ -1.84
MSH4O15457 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.55□□□□□ -1.84
MSH4O15457 AC108078.3-201ENST00000502633 489 ntBASIC3.55□□□□□ -1.84
MSH4O15457 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
MSH4O15457 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC3.55□□□□□ -1.84
MSH4O15457 RNU6-202P-201ENST00000515998 96 ntBASIC3.55□□□□□ -1.84
MSH4O15457 AC104027.1-201ENST00000521887 300 ntBASIC3.55□□□□□ -1.84
MSH4O15457 IGJP1-201ENST00000522682 475 ntBASIC3.55□□□□□ -1.84
MSH4O15457 RGS4-207ENST00000527809 817 ntTSL 4 BASIC3.55□□□□□ -1.84
MSH4O15457 OR4R2P-201ENST00000530815 597 ntBASIC3.55□□□□□ -1.84
MSH4O15457 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.55□□□□□ -1.84
MSH4O15457 AC037471.2-201ENST00000564941 598 ntBASIC3.55□□□□□ -1.84
MSH4O15457 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.55□□□□□ -1.84
MSH4O15457 AL158211.2-201ENST00000607282 395 ntBASIC3.55□□□□□ -1.84
MSH4O15457 AC021851.1-201ENST00000608537 1082 ntBASIC3.55□□□□□ -1.84
MSH4O15457 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
MSH4O15457 AC006065.5-201ENST00000623427 349 ntBASIC3.55□□□□□ -1.84
MSH4O15457 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC3.55□□□□□ -1.84
MSH4O15457 MIR4496-201ENST00000635896 61 ntBASIC3.55□□□□□ -1.84
MSH4O15457 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
MSH4O15457 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 436.3 ms