Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC5.06□□□□□ -1.6
FOXN1O15353 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC5.06□□□□□ -1.6
FOXN1O15353 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
FOXN1O15353 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
FOXN1O15353 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
FOXN1O15353 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC5.05□□□□□ -1.6
FOXN1O15353 RNU6-253P-201ENST00000384730 105 ntBASIC5.05□□□□□ -1.6
FOXN1O15353 SNORD115-47-201ENST00000391226 86 ntBASIC5.05□□□□□ -1.6
FOXN1O15353 HDGFP1-201ENST00000405943 252 ntBASIC5.05□□□□□ -1.6
FOXN1O15353 NUP35P2-201ENST00000416748 943 ntBASIC5.05□□□□□ -1.6
FOXN1O15353 PTP4A1P1-201ENST00000420539 515 ntBASIC5.05□□□□□ -1.6
FOXN1O15353 OFD1P2Y-201ENST00000421895 1149 ntBASIC5.05□□□□□ -1.6
FOXN1O15353 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC5.05□□□□□ -1.6
FOXN1O15353 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC5.05□□□□□ -1.6
FOXN1O15353 HMGB1P31-201ENST00000437242 427 ntBASIC5.05□□□□□ -1.6
FOXN1O15353 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC5.05□□□□□ -1.6
FOXN1O15353 MTND4LP16-201ENST00000440828 295 ntBASIC5.05□□□□□ -1.6
FOXN1O15353 AC112653.1-201ENST00000443851 386 ntBASIC5.05□□□□□ -1.6
FOXN1O15353 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC5.05□□□□□ -1.6
FOXN1O15353 MTND6P6-201ENST00000478031 263 ntBASIC5.05□□□□□ -1.6
FOXN1O15353 FAM92A1P2-202ENST00000504766 877 ntBASIC5.05□□□□□ -1.6
FOXN1O15353 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
FOXN1O15353 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC5.05□□□□□ -1.6
FOXN1O15353 AC099522.1-202ENST00000514718 367 ntBASIC5.05□□□□□ -1.6
FOXN1O15353 PRELID3BP4-201ENST00000515476 571 ntBASIC5.05□□□□□ -1.6
FOXN1O15353 RNA5SP519-201ENST00000516480 119 ntBASIC5.05□□□□□ -1.6
FOXN1O15353 SNORA31.13-201ENST00000516624 135 ntBASIC5.05□□□□□ -1.6
FOXN1O15353 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC5.05□□□□□ -1.6
FOXN1O15353 SMARCE1P4-201ENST00000523647 241 ntBASIC5.05□□□□□ -1.6
FOXN1O15353 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC5.05□□□□□ -1.6
FOXN1O15353 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC5.05□□□□□ -1.6
FOXN1O15353 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC5.05□□□□□ -1.6
FOXN1O15353 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
FOXN1O15353 MIR3912-201ENST00000577566 105 ntBASIC5.05□□□□□ -1.6
FOXN1O15353 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC5.05□□□□□ -1.6
FOXN1O15353 BNIP3P26-201ENST00000600827 554 ntBASIC5.05□□□□□ -1.6
FOXN1O15353 AP000907.4-201ENST00000604143 237 ntBASIC5.05□□□□□ -1.6
FOXN1O15353 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC5.05□□□□□ -1.6
FOXN1O15353 AC009994.1-201ENST00000606889 253 ntBASIC5.05□□□□□ -1.6
FOXN1O15353 MIR3651-201ENST00000630427 90 ntBASIC5.05□□□□□ -1.6
FOXN1O15353 MTND1P37-201ENST00000636562 264 ntBASIC5.05□□□□□ -1.6
FOXN1O15353 ANKRD20A10P-201ENST00000457591 1515 ntBASIC5.05□□□□□ -1.6
FOXN1O15353 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
FOXN1O15353 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
FOXN1O15353 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
FOXN1O15353 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
FOXN1O15353 MTCO1P18-201ENST00000455518 1419 ntBASIC5.05□□□□□ -1.6
FOXN1O15353 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
FOXN1O15353 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC5.04□□□□□ -1.6
FOXN1O15353 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC5.04□□□□□ -1.6
FOXN1O15353 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
FOXN1O15353 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
FOXN1O15353 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
FOXN1O15353 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC5.04□□□□□ -1.6
FOXN1O15353 AC008079.2-201ENST00000623543 20396 ntBASIC5.04□□□□□ -1.6
FOXN1O15353 CDC27P2-201ENST00000425026 1922 ntBASIC5.04□□□□□ -1.6
FOXN1O15353 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
FOXN1O15353 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
FOXN1O15353 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC5.04□□□□□ -1.6
FOXN1O15353 RNU6-549P-201ENST00000384433 107 ntBASIC5.04□□□□□ -1.6
FOXN1O15353 RNA5SP105-201ENST00000391123 113 ntBASIC5.04□□□□□ -1.6
FOXN1O15353 MIR1277-201ENST00000408536 78 ntBASIC5.04□□□□□ -1.6
FOXN1O15353 Z97055.1-201ENST00000419730 712 ntBASIC5.04□□□□□ -1.6
FOXN1O15353 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC5.04□□□□□ -1.6
FOXN1O15353 TRIM60P3Y-201ENST00000432201 673 ntBASIC5.04□□□□□ -1.6
FOXN1O15353 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC5.04□□□□□ -1.6
FOXN1O15353 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC5.04□□□□□ -1.6
FOXN1O15353 AL451050.1-201ENST00000450126 415 ntBASIC5.04□□□□□ -1.6
FOXN1O15353 HMGB1P5-202ENST00000451497 985 ntBASIC5.04□□□□□ -1.6
FOXN1O15353 RPS26P28-201ENST00000470806 348 ntBASIC5.04□□□□□ -1.6
FOXN1O15353 HMGN1P10-201ENST00000474557 553 ntBASIC5.04□□□□□ -1.6
FOXN1O15353 TMED11P-201ENST00000479478 690 ntBASIC5.04□□□□□ -1.6
FOXN1O15353 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC5.04□□□□□ -1.6
FOXN1O15353 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC5.04□□□□□ -1.6
FOXN1O15353 WBP1LP4-201ENST00000505043 344 ntBASIC5.04□□□□□ -1.6
FOXN1O15353 AC090071.1-201ENST00000507713 644 ntBASIC5.04□□□□□ -1.6
FOXN1O15353 LEF1-218ENST00000512172 598 ntTSL 2 BASIC5.04□□□□□ -1.6
FOXN1O15353 TCP11X3P-202ENST00000514289 1254 ntBASIC5.04□□□□□ -1.6
FOXN1O15353 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC5.04□□□□□ -1.6
FOXN1O15353 AC090151.1-201ENST00000520784 730 ntBASIC5.04□□□□□ -1.6
FOXN1O15353 NTS-203ENST00000551529 801 ntTSL 3 BASIC5.04□□□□□ -1.6
FOXN1O15353 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC5.04□□□□□ -1.6
FOXN1O15353 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC5.04□□□□□ -1.6
FOXN1O15353 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC5.04□□□□□ -1.6
FOXN1O15353 AC103881.1-201ENST00000603476 538 ntBASIC5.04□□□□□ -1.6
FOXN1O15353 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC5.04□□□□□ -1.6
FOXN1O15353 AC006566.1-201ENST00000608943 513 ntBASIC5.04□□□□□ -1.6
FOXN1O15353 AC107294.1-201ENST00000609524 467 ntBASIC5.04□□□□□ -1.6
FOXN1O15353 AL589743.7-201ENST00000612637 233 ntBASIC5.04□□□□□ -1.6
FOXN1O15353 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
FOXN1O15353 AL359697.1-201ENST00000624879 587 ntBASIC5.04□□□□□ -1.6
FOXN1O15353 AC005539.1-201ENST00000443768 1479 ntBASIC5.04□□□□□ -1.6
FOXN1O15353 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
FOXN1O15353 AC092435.4-201ENST00000623012 4159 ntBASIC5.04□□□□□ -1.6
FOXN1O15353 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
FOXN1O15353 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
FOXN1O15353 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
FOXN1O15353 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC5.04□□□□□ -1.6
FOXN1O15353 AL133243.3-201ENST00000617415 3004 ntBASIC5.04□□□□□ -1.6
FOXN1O15353 LINC00622-201ENST00000562811 1570 ntBASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms