Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC4.94□□□□□ -1.62
CUX2O14529 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC4.94□□□□□ -1.62
CUX2O14529 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC4.94□□□□□ -1.62
CUX2O14529 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC4.94□□□□□ -1.62
CUX2O14529 AC092608.2-201ENST00000624427 218 ntBASIC4.94□□□□□ -1.62
CUX2O14529 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC4.94□□□□□ -1.62
CUX2O14529 AK9-203ENST00000368948 2478 ntTSL 5 BASIC4.93□□□□□ -1.62
CUX2O14529 RNU6-819P-201ENST00000364116 107 ntBASIC4.93□□□□□ -1.62
CUX2O14529 RPS12P23-201ENST00000419579 400 ntBASIC4.93□□□□□ -1.62
CUX2O14529 DUTP6-201ENST00000425573 462 ntBASIC4.93□□□□□ -1.62
CUX2O14529 HMGB3P10-201ENST00000434734 572 ntBASIC4.93□□□□□ -1.62
CUX2O14529 AL589765.3-201ENST00000446084 462 ntBASIC4.93□□□□□ -1.62
CUX2O14529 BUD31P2-201ENST00000449374 300 ntBASIC4.93□□□□□ -1.62
CUX2O14529 AC117522.3-201ENST00000507974 584 ntBASIC4.93□□□□□ -1.62
CUX2O14529 AC022784.5-201ENST00000522241 437 ntBASIC4.93□□□□□ -1.62
CUX2O14529 AC007620.3-201ENST00000608131 497 ntBASIC4.93□□□□□ -1.62
CUX2O14529 AL110115.1-201ENST00000614396 364 ntBASIC4.93□□□□□ -1.62
CUX2O14529 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
CUX2O14529 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CUX2O14529 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CUX2O14529 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
CUX2O14529 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
CUX2O14529 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
CUX2O14529 RNU1-75P-201ENST00000347264 129 ntBASIC4.92□□□□□ -1.62
CUX2O14529 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC4.92□□□□□ -1.62
CUX2O14529 AC110754.1-201ENST00000399740 601 ntBASIC4.92□□□□□ -1.62
CUX2O14529 RPS7P13-201ENST00000413955 498 ntBASIC4.92□□□□□ -1.62
CUX2O14529 RFESDP1-201ENST00000422350 461 ntBASIC4.92□□□□□ -1.62
CUX2O14529 AC006539.3-201ENST00000454258 129 ntBASIC4.92□□□□□ -1.62
CUX2O14529 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC4.92□□□□□ -1.62
CUX2O14529 OR5H5P-201ENST00000503164 928 ntBASIC4.92□□□□□ -1.62
CUX2O14529 RNU6-551P-201ENST00000516661 103 ntBASIC4.92□□□□□ -1.62
CUX2O14529 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC4.92□□□□□ -1.62
CUX2O14529 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC4.92□□□□□ -1.62
CUX2O14529 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC4.92□□□□□ -1.62
CUX2O14529 AC122134.1-201ENST00000565664 1104 ntBASIC4.92□□□□□ -1.62
CUX2O14529 FAM106CP-201ENST00000582212 507 ntBASIC4.92□□□□□ -1.62
CUX2O14529 AL008729.2-201ENST00000606393 473 ntBASIC4.92□□□□□ -1.62
CUX2O14529 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.92□□□□□ -1.62
CUX2O14529 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CUX2O14529 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CUX2O14529 MIR181A2-201ENST00000384863 110 ntBASIC4.91□□□□□ -1.62
CUX2O14529 RPL23AP36-201ENST00000413895 458 ntBASIC4.91□□□□□ -1.62
CUX2O14529 XKRYP6-201ENST00000440468 1116 ntBASIC4.91□□□□□ -1.62
CUX2O14529 XKRYP3-201ENST00000442113 1116 ntBASIC4.91□□□□□ -1.62
CUX2O14529 UQCRHP3-201ENST00000451503 251 ntBASIC4.91□□□□□ -1.62
CUX2O14529 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC4.91□□□□□ -1.62
CUX2O14529 RN7SL499P-201ENST00000481141 276 ntBASIC4.91□□□□□ -1.62
CUX2O14529 AC117525.1-201ENST00000515228 503 ntBASIC4.91□□□□□ -1.62
CUX2O14529 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC4.91□□□□□ -1.62
CUX2O14529 BNIP3P7-201ENST00000605641 516 ntBASIC4.91□□□□□ -1.62
CUX2O14529 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CUX2O14529 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
CUX2O14529 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
CUX2O14529 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.62
CUX2O14529 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
CUX2O14529 RNU1-112P-201ENST00000364401 164 ntBASIC4.9□□□□□ -1.62
CUX2O14529 SNORA36C-201ENST00000384289 132 ntBASIC4.9□□□□□ -1.62
CUX2O14529 AL392003.1-201ENST00000434394 243 ntBASIC4.9□□□□□ -1.62
CUX2O14529 AC091179.1-201ENST00000461606 579 ntBASIC4.9□□□□□ -1.62
CUX2O14529 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
CUX2O14529 ATG10-AS1-201ENST00000504846 648 ntBASIC4.9□□□□□ -1.62
CUX2O14529 AC009268.1-201ENST00000561352 1203 ntBASIC4.9□□□□□ -1.62
CUX2O14529 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC4.9□□□□□ -1.62
CUX2O14529 AC007318.2-201ENST00000620999 243 ntBASIC4.9□□□□□ -1.62
CUX2O14529 NEAT1-202ENST00000501122 22743 ntBASIC4.9□□□□□ -1.63
CUX2O14529 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC4.9□□□□□ -1.63
CUX2O14529 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CUX2O14529 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC4.89□□□□□ -1.63
CUX2O14529 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
CUX2O14529 AC093084.1-201ENST00000424233 687 ntBASIC4.89□□□□□ -1.63
CUX2O14529 MTND4LP13-201ENST00000425022 298 ntBASIC4.89□□□□□ -1.63
CUX2O14529 AC104629.2-201ENST00000468627 598 ntBASIC4.89□□□□□ -1.63
CUX2O14529 AC104027.1-201ENST00000521887 300 ntBASIC4.89□□□□□ -1.63
CUX2O14529 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC4.89□□□□□ -1.63
CUX2O14529 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC4.89□□□□□ -1.63
CUX2O14529 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
CUX2O14529 AC087565.3-202ENST00000642085 1603 ntBASIC4.89□□□□□ -1.63
CUX2O14529 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CUX2O14529 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CUX2O14529 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
CUX2O14529 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC4.88□□□□□ -1.63
CUX2O14529 AL138827.1-201ENST00000402666 306 ntBASIC4.88□□□□□ -1.63
CUX2O14529 RNU4-53P-201ENST00000410828 140 ntBASIC4.88□□□□□ -1.63
CUX2O14529 MTCYBP7-201ENST00000419540 1134 ntBASIC4.88□□□□□ -1.63
CUX2O14529 AL356320.1-201ENST00000429616 163 ntBASIC4.88□□□□□ -1.63
CUX2O14529 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC4.88□□□□□ -1.63
CUX2O14529 RPL23AP22-201ENST00000437556 453 ntBASIC4.88□□□□□ -1.63
CUX2O14529 AC092013.1-201ENST00000438795 332 ntBASIC4.88□□□□□ -1.63
CUX2O14529 FAM103A2P-201ENST00000444122 354 ntBASIC4.88□□□□□ -1.63
CUX2O14529 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.88□□□□□ -1.63
CUX2O14529 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC4.88□□□□□ -1.63
CUX2O14529 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
CUX2O14529 MIR4781-201ENST00000585250 76 ntBASIC4.88□□□□□ -1.63
CUX2O14529 AC008121.2-201ENST00000614647 523 ntBASIC4.88□□□□□ -1.63
CUX2O14529 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC4.88□□□□□ -1.63
CUX2O14529 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CUX2O14529 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC4.88□□□□□ -1.63
CUX2O14529 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
CUX2O14529 RNA5SP502-201ENST00000362694 119 ntBASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 155.7 ms