Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 Y_RNA.25-201ENST00000362528 102 ntBASIC3.53□□□□□ -1.84
SLC28A1O00337 RNA5SP258-201ENST00000362750 119 ntBASIC3.53□□□□□ -1.84
SLC28A1O00337 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
SLC28A1O00337 RNU6-629P-201ENST00000384061 103 ntBASIC3.53□□□□□ -1.84
SLC28A1O00337 RNU6-1181P-201ENST00000384191 106 ntBASIC3.53□□□□□ -1.84
SLC28A1O00337 RNU6-925P-201ENST00000384629 104 ntBASIC3.53□□□□□ -1.84
SLC28A1O00337 MIR506-201ENST00000384998 124 ntBASIC3.53□□□□□ -1.84
SLC28A1O00337 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
SLC28A1O00337 AC016769.3-201ENST00000396562 315 ntBASIC3.53□□□□□ -1.84
SLC28A1O00337 AIMP1P1-201ENST00000418670 937 ntBASIC3.53□□□□□ -1.84
SLC28A1O00337 GTF2IP23-201ENST00000423746 351 ntBASIC3.53□□□□□ -1.84
SLC28A1O00337 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
SLC28A1O00337 AL591419.1-201ENST00000427423 339 ntBASIC3.53□□□□□ -1.84
SLC28A1O00337 C4BPAP2-201ENST00000428434 478 ntBASIC3.53□□□□□ -1.84
SLC28A1O00337 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
SLC28A1O00337 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.53□□□□□ -1.84
SLC28A1O00337 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC3.53□□□□□ -1.84
SLC28A1O00337 TPT1P12-201ENST00000448968 492 ntBASIC3.53□□□□□ -1.84
SLC28A1O00337 ANP32BP2-201ENST00000454525 545 ntBASIC3.53□□□□□ -1.84
SLC28A1O00337 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC3.53□□□□□ -1.84
SLC28A1O00337 AL136097.1-201ENST00000456945 913 ntBASIC3.53□□□□□ -1.84
SLC28A1O00337 AC092757.1-201ENST00000467293 467 ntBASIC3.53□□□□□ -1.84
SLC28A1O00337 TMED11P-201ENST00000479478 690 ntBASIC3.53□□□□□ -1.84
SLC28A1O00337 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC3.53□□□□□ -1.84
SLC28A1O00337 CEACAMP10-202ENST00000495431 496 ntBASIC3.53□□□□□ -1.84
SLC28A1O00337 RPL21P131-201ENST00000497298 483 ntBASIC3.53□□□□□ -1.84
SLC28A1O00337 RPL23AP55-201ENST00000498163 452 ntBASIC3.53□□□□□ -1.84
SLC28A1O00337 AC119751.4-201ENST00000507498 357 ntBASIC3.53□□□□□ -1.84
SLC28A1O00337 AC113347.3-201ENST00000509113 148 ntBASIC3.53□□□□□ -1.84
SLC28A1O00337 RNU6-352P-201ENST00000516908 107 ntBASIC3.53□□□□□ -1.84
SLC28A1O00337 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC3.53□□□□□ -1.84
SLC28A1O00337 AP001207.2-201ENST00000519490 539 ntBASIC3.53□□□□□ -1.84
SLC28A1O00337 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC3.53□□□□□ -1.84
SLC28A1O00337 RGS5-218ENST00000526176 574 ntTSL 4 BASIC3.53□□□□□ -1.84
SLC28A1O00337 ZKSCAN7P1-201ENST00000543668 673 ntBASIC3.53□□□□□ -1.84
SLC28A1O00337 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC3.53□□□□□ -1.84
SLC28A1O00337 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
SLC28A1O00337 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
SLC28A1O00337 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.53□□□□□ -1.84
SLC28A1O00337 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.53□□□□□ -1.84
SLC28A1O00337 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC3.53□□□□□ -1.84
SLC28A1O00337 AC005332.6-201ENST00000613178 446 ntBASIC3.53□□□□□ -1.84
SLC28A1O00337 AC104763.3-201ENST00000613765 618 ntBASIC3.53□□□□□ -1.84
SLC28A1O00337 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
SLC28A1O00337 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
SLC28A1O00337 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC3.53□□□□□ -1.84
SLC28A1O00337 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC3.53□□□□□ -1.84
SLC28A1O00337 FP236240.3-201ENST00000623061 327 ntBASIC3.53□□□□□ -1.84
SLC28A1O00337 AL732618.1-201ENST00000623251 301 ntBASIC3.53□□□□□ -1.84
SLC28A1O00337 AC092184.1-201ENST00000625042 715 ntBASIC3.53□□□□□ -1.84
SLC28A1O00337 CYP3A51P-201ENST00000633513 256 ntBASIC3.53□□□□□ -1.84
SLC28A1O00337 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
SLC28A1O00337 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
SLC28A1O00337 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
SLC28A1O00337 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
SLC28A1O00337 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
SLC28A1O00337 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
SLC28A1O00337 MIR372-201ENST00000362225 67 ntBASIC3.52□□□□□ -1.85
SLC28A1O00337 RNU6-1249P-201ENST00000363237 111 ntBASIC3.52□□□□□ -1.85
SLC28A1O00337 RNU5D-1-201ENST00000363299 116 ntBASIC3.52□□□□□ -1.85
SLC28A1O00337 RNA5SP235-201ENST00000365411 114 ntBASIC3.52□□□□□ -1.85
SLC28A1O00337 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
SLC28A1O00337 SNORA40.2-201ENST00000390847 128 ntBASIC3.52□□□□□ -1.85
SLC28A1O00337 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
SLC28A1O00337 SOD2P1-201ENST00000396543 562 ntBASIC3.52□□□□□ -1.85
SLC28A1O00337 RSL24D1P1-201ENST00000404972 493 ntBASIC3.52□□□□□ -1.85
SLC28A1O00337 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.52□□□□□ -1.85
SLC28A1O00337 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC3.52□□□□□ -1.85
SLC28A1O00337 TEX41-203ENST00000420472 765 ntTSL 3 BASIC3.52□□□□□ -1.85
SLC28A1O00337 MRPS36P1-201ENST00000421291 307 ntBASIC3.52□□□□□ -1.85
SLC28A1O00337 COX6CP17-201ENST00000421389 185 ntBASIC3.52□□□□□ -1.85
SLC28A1O00337 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.52□□□□□ -1.85
SLC28A1O00337 HMGB3P5-201ENST00000428894 612 ntBASIC3.52□□□□□ -1.85
SLC28A1O00337 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.52□□□□□ -1.85
SLC28A1O00337 VN1R10P-201ENST00000447106 875 ntBASIC3.52□□□□□ -1.85
SLC28A1O00337 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC3.52□□□□□ -1.85
SLC28A1O00337 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.52□□□□□ -1.85
SLC28A1O00337 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC3.52□□□□□ -1.85
SLC28A1O00337 UBDP1-202ENST00000457888 382 ntBASIC3.52□□□□□ -1.85
SLC28A1O00337 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.52□□□□□ -1.85
SLC28A1O00337 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.52□□□□□ -1.85
SLC28A1O00337 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.52□□□□□ -1.85
SLC28A1O00337 AL139099.1-201ENST00000497398 403 ntBASIC3.52□□□□□ -1.85
SLC28A1O00337 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC3.52□□□□□ -1.85
SLC28A1O00337 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.52□□□□□ -1.85
SLC28A1O00337 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC3.52□□□□□ -1.85
SLC28A1O00337 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.52□□□□□ -1.85
SLC28A1O00337 AC010460.2-201ENST00000509054 677 ntBASIC3.52□□□□□ -1.85
SLC28A1O00337 MTCYBP16-201ENST00000509187 1129 ntBASIC3.52□□□□□ -1.85
SLC28A1O00337 MIR2116-201ENST00000517221 80 ntBASIC3.52□□□□□ -1.85
SLC28A1O00337 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
SLC28A1O00337 AC109635.4-202ENST00000531666 412 ntBASIC3.52□□□□□ -1.85
SLC28A1O00337 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.52□□□□□ -1.85
SLC28A1O00337 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.52□□□□□ -1.85
SLC28A1O00337 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC3.52□□□□□ -1.85
SLC28A1O00337 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC3.52□□□□□ -1.85
SLC28A1O00337 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC3.52□□□□□ -1.85
SLC28A1O00337 AC012182.1-201ENST00000570133 895 ntBASIC3.52□□□□□ -1.85
SLC28A1O00337 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.52□□□□□ -1.85
SLC28A1O00337 VN1R83P-201ENST00000595685 445 ntBASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms