Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
SRRM4A7MD48 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC3.29□□□□□ -1.88
SRRM4A7MD48 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC3.29□□□□□ -1.88
SRRM4A7MD48 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
SRRM4A7MD48 AC002400.1-201ENST00000569310 726 ntBASIC3.29□□□□□ -1.88
SRRM4A7MD48 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SRRM4A7MD48 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.29□□□□□ -1.88
SRRM4A7MD48 AC090615.1-201ENST00000577519 154 ntBASIC3.29□□□□□ -1.88
SRRM4A7MD48 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC3.29□□□□□ -1.88
SRRM4A7MD48 VN1R78P-201ENST00000597393 564 ntBASIC3.29□□□□□ -1.88
SRRM4A7MD48 AC104662.1-201ENST00000604448 511 ntBASIC3.29□□□□□ -1.88
SRRM4A7MD48 HMGB1P50-201ENST00000605814 607 ntBASIC3.29□□□□□ -1.88
SRRM4A7MD48 RNU6-88P-201ENST00000606801 100 ntBASIC3.29□□□□□ -1.88
SRRM4A7MD48 AP003392.5-201ENST00000607857 415 ntBASIC3.29□□□□□ -1.88
SRRM4A7MD48 AC021755.4-201ENST00000616620 456 ntBASIC3.29□□□□□ -1.88
SRRM4A7MD48 AC004825.2-201ENST00000616634 455 ntBASIC3.29□□□□□ -1.88
SRRM4A7MD48 AL356121.2-201ENST00000624715 780 ntBASIC3.29□□□□□ -1.88
SRRM4A7MD48 AC091925.2-201ENST00000625059 256 ntBASIC3.29□□□□□ -1.88
SRRM4A7MD48 MIR3653-201ENST00000625572 110 ntBASIC3.29□□□□□ -1.88
SRRM4A7MD48 AL773545.4-201ENST00000637262 310 ntBASIC3.29□□□□□ -1.88
SRRM4A7MD48 AL513478.4-201ENST00000641636 310 ntBASIC3.29□□□□□ -1.88
SRRM4A7MD48 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
SRRM4A7MD48 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.29□□□□□ -1.88
SRRM4A7MD48 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SRRM4A7MD48 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
SRRM4A7MD48 Z82217.1-201ENST00000625157 8149 ntBASIC3.29□□□□□ -1.88
SRRM4A7MD48 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC3.29□□□□□ -1.88
SRRM4A7MD48 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
SRRM4A7MD48 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
SRRM4A7MD48 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
SRRM4A7MD48 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
SRRM4A7MD48 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC3.28□□□□□ -1.88
SRRM4A7MD48 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC3.28□□□□□ -1.88
SRRM4A7MD48 USP8P1-201ENST00000494673 3183 ntBASIC3.28□□□□□ -1.88
SRRM4A7MD48 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
SRRM4A7MD48 AC007685.1-201ENST00000329806 452 ntBASIC3.28□□□□□ -1.88
SRRM4A7MD48 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.28□□□□□ -1.88
SRRM4A7MD48 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
SRRM4A7MD48 RNU5A-2P-201ENST00000384337 116 ntBASIC3.28□□□□□ -1.88
SRRM4A7MD48 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
SRRM4A7MD48 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC3.28□□□□□ -1.88
SRRM4A7MD48 RNU4-25P-201ENST00000410569 230 ntBASIC3.28□□□□□ -1.88
SRRM4A7MD48 RPL37P18-201ENST00000411602 243 ntBASIC3.28□□□□□ -1.88
SRRM4A7MD48 AL008987.1-201ENST00000415528 237 ntBASIC3.28□□□□□ -1.88
SRRM4A7MD48 RAD23BP2-201ENST00000416003 1207 ntBASIC3.28□□□□□ -1.88
SRRM4A7MD48 AC005005.2-201ENST00000420779 380 ntBASIC3.28□□□□□ -1.88
SRRM4A7MD48 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
SRRM4A7MD48 DNAJC19P7-201ENST00000428811 344 ntBASIC3.28□□□□□ -1.88
SRRM4A7MD48 MTND1P32-201ENST00000433043 938 ntBASIC3.28□□□□□ -1.88
SRRM4A7MD48 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC3.28□□□□□ -1.88
SRRM4A7MD48 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.28□□□□□ -1.88
SRRM4A7MD48 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC3.28□□□□□ -1.88
SRRM4A7MD48 MTCYBP31-201ENST00000438855 1122 ntBASIC3.28□□□□□ -1.88
SRRM4A7MD48 MTCYBP34-201ENST00000439552 670 ntBASIC3.28□□□□□ -1.88
SRRM4A7MD48 FGF7P5-201ENST00000441829 291 ntBASIC3.28□□□□□ -1.88
SRRM4A7MD48 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.28□□□□□ -1.88
SRRM4A7MD48 NPM1P49-201ENST00000448027 714 ntBASIC3.28□□□□□ -1.88
SRRM4A7MD48 HMGB1P15-201ENST00000453854 435 ntBASIC3.28□□□□□ -1.88
SRRM4A7MD48 AC133473.1-201ENST00000455173 299 ntBASIC3.28□□□□□ -1.88
SRRM4A7MD48 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.28□□□□□ -1.88
SRRM4A7MD48 VWA8P1-201ENST00000510889 176 ntBASIC3.28□□□□□ -1.88
SRRM4A7MD48 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC3.28□□□□□ -1.88
SRRM4A7MD48 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.28□□□□□ -1.88
SRRM4A7MD48 MED28P5-201ENST00000528254 438 ntBASIC3.28□□□□□ -1.88
SRRM4A7MD48 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC3.28□□□□□ -1.88
SRRM4A7MD48 AC007424.1-203ENST00000554613 687 ntBASIC3.28□□□□□ -1.88
SRRM4A7MD48 CYCSP2-201ENST00000558168 301 ntBASIC3.28□□□□□ -1.88
SRRM4A7MD48 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC3.28□□□□□ -1.88
SRRM4A7MD48 VN1R92P-201ENST00000598511 928 ntBASIC3.28□□□□□ -1.88
SRRM4A7MD48 AL590282.1-201ENST00000610379 1136 ntBASIC3.28□□□□□ -1.88
SRRM4A7MD48 MIR7151-201ENST00000617477 60 ntBASIC3.28□□□□□ -1.88
SRRM4A7MD48 AL355493.4-201ENST00000618530 292 ntBASIC3.28□□□□□ -1.88
SRRM4A7MD48 AL359715.5-201ENST00000623431 443 ntBASIC3.28□□□□□ -1.88
SRRM4A7MD48 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
SRRM4A7MD48 AC120349.3-201ENST00000624377 529 ntBASIC3.28□□□□□ -1.88
SRRM4A7MD48 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.28□□□□□ -1.88
SRRM4A7MD48 AC008725.1-201ENST00000605123 2263 ntBASIC3.28□□□□□ -1.88
SRRM4A7MD48 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC3.28□□□□□ -1.88
SRRM4A7MD48 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
SRRM4A7MD48 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
SRRM4A7MD48 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC3.28□□□□□ -1.88
SRRM4A7MD48 AC095050.2-201ENST00000510748 1458 ntBASIC3.28□□□□□ -1.88
SRRM4A7MD48 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SRRM4A7MD48 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.27□□□□□ -1.89
SRRM4A7MD48 LARP1BP1-201ENST00000506036 1359 ntBASIC3.27□□□□□ -1.89
SRRM4A7MD48 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SRRM4A7MD48 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SRRM4A7MD48 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.27□□□□□ -1.89
SRRM4A7MD48 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.27□□□□□ -1.89
SRRM4A7MD48 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
SRRM4A7MD48 SNORD35B-201ENST00000363660 87 ntBASIC3.27□□□□□ -1.89
SRRM4A7MD48 RNU6-931P-201ENST00000363850 107 ntBASIC3.27□□□□□ -1.89
SRRM4A7MD48 RNU1-32P-201ENST00000363937 159 ntBASIC3.27□□□□□ -1.89
SRRM4A7MD48 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SRRM4A7MD48 RPL23AP29-201ENST00000397284 453 ntBASIC3.27□□□□□ -1.89
SRRM4A7MD48 RNU2-71P-201ENST00000411395 189 ntBASIC3.27□□□□□ -1.89
SRRM4A7MD48 FAR2P2-201ENST00000413041 594 ntBASIC3.27□□□□□ -1.89
SRRM4A7MD48 TPMTP2-201ENST00000414372 726 ntBASIC3.27□□□□□ -1.89
SRRM4A7MD48 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC3.27□□□□□ -1.89
SRRM4A7MD48 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms