Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
RIMBP3Q9UFD9 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC30.69■■■□□ 2.5
RIMBP3Q9UFD9 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC30.69■■■□□ 2.5
RIMBP3Q9UFD9 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC30.69■■■□□ 2.5
RIMBP3Q9UFD9 IRF8-202ENST00000562492 946 ntTSL 3 BASIC30.69■■■□□ 2.5
RIMBP3Q9UFD9 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC30.69■■■□□ 2.5
RIMBP3Q9UFD9 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC30.69■■■□□ 2.5
RIMBP3Q9UFD9 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC30.69■■■□□ 2.5
RIMBP3Q9UFD9 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC30.69■■■□□ 2.5
RIMBP3Q9UFD9 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC30.69■■■□□ 2.5
RIMBP3Q9UFD9 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC30.68■■■□□ 2.5
RIMBP3Q9UFD9 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC30.68■■■□□ 2.5
RIMBP3Q9UFD9 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC30.68■■■□□ 2.5
RIMBP3Q9UFD9 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
RIMBP3Q9UFD9 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC30.68■■■□□ 2.5
RIMBP3Q9UFD9 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC30.68■■■□□ 2.5
RIMBP3Q9UFD9 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC30.68■■■□□ 2.5
RIMBP3Q9UFD9 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC30.68■■■□□ 2.5
RIMBP3Q9UFD9 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC30.68■■■□□ 2.5
RIMBP3Q9UFD9 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC30.68■■■□□ 2.5
RIMBP3Q9UFD9 PRR29-209ENST00000582540 967 ntTSL 2 BASIC30.68■■■□□ 2.5
RIMBP3Q9UFD9 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
RIMBP3Q9UFD9 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC30.68■■■□□ 2.5
RIMBP3Q9UFD9 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC30.68■■■□□ 2.5
RIMBP3Q9UFD9 ME2-206ENST00000638410 2289 ntTSL 5 BASIC30.68■■■□□ 2.5
RIMBP3Q9UFD9 ME2-210ENST00000639255 2262 ntTSL 5 BASIC30.68■■■□□ 2.5
RIMBP3Q9UFD9 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC30.67■■■□□ 2.5
RIMBP3Q9UFD9 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC30.67■■■□□ 2.5
RIMBP3Q9UFD9 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
RIMBP3Q9UFD9 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
RIMBP3Q9UFD9 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC30.67■■■□□ 2.5
RIMBP3Q9UFD9 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC30.67■■■□□ 2.5
RIMBP3Q9UFD9 DDT-203ENST00000403754 569 ntTSL 3 BASIC30.67■■■□□ 2.5
RIMBP3Q9UFD9 AC004832.2-201ENST00000426397 482 ntBASIC30.67■■■□□ 2.5
RIMBP3Q9UFD9 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC30.67■■■□□ 2.5
RIMBP3Q9UFD9 MIR1199-201ENST00000621445 119 ntBASIC30.67■■■□□ 2.5
RIMBP3Q9UFD9 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC30.67■■■□□ 2.5
RIMBP3Q9UFD9 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
RIMBP3Q9UFD9 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC30.67■■■□□ 2.5
RIMBP3Q9UFD9 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
RIMBP3Q9UFD9 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC30.67■■■□□ 2.5
RIMBP3Q9UFD9 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC30.67■■■□□ 2.5
RIMBP3Q9UFD9 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC30.66■■■□□ 2.5
RIMBP3Q9UFD9 COA5-202ENST00000409997 557 ntTSL 4 BASIC30.66■■■□□ 2.5
RIMBP3Q9UFD9 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC30.66■■■□□ 2.5
RIMBP3Q9UFD9 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC30.66■■■□□ 2.5
RIMBP3Q9UFD9 ORC5-208ENST00000626700 344 ntTSL 3 BASIC30.66■■■□□ 2.5
RIMBP3Q9UFD9 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
RIMBP3Q9UFD9 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC30.66■■■□□ 2.5
RIMBP3Q9UFD9 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
RIMBP3Q9UFD9 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC30.66■■■□□ 2.5
RIMBP3Q9UFD9 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
RIMBP3Q9UFD9 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
RIMBP3Q9UFD9 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
RIMBP3Q9UFD9 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
RIMBP3Q9UFD9 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC30.65■■■□□ 2.5
RIMBP3Q9UFD9 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
RIMBP3Q9UFD9 MIR3917-201ENST00000580971 93 ntBASIC30.65■■■□□ 2.5
RIMBP3Q9UFD9 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
RIMBP3Q9UFD9 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
RIMBP3Q9UFD9 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
RIMBP3Q9UFD9 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC30.65■■■□□ 2.5
RIMBP3Q9UFD9 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC30.65■■■□□ 2.5
RIMBP3Q9UFD9 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC30.65■■■□□ 2.5
RIMBP3Q9UFD9 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC30.65■■■□□ 2.5
RIMBP3Q9UFD9 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC30.65■■■□□ 2.5
RIMBP3Q9UFD9 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC30.65■■■□□ 2.5
RIMBP3Q9UFD9 AC011467.4-201ENST00000594891 528 ntBASIC30.65■■■□□ 2.5
RIMBP3Q9UFD9 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC30.64■■■□□ 2.5
RIMBP3Q9UFD9 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
RIMBP3Q9UFD9 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC30.64■■■□□ 2.5
RIMBP3Q9UFD9 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC30.64■■■□□ 2.49
RIMBP3Q9UFD9 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.49
RIMBP3Q9UFD9 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC30.63■■■□□ 2.49
RIMBP3Q9UFD9 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC30.63■■■□□ 2.49
RIMBP3Q9UFD9 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC30.63■■■□□ 2.49
RIMBP3Q9UFD9 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC30.63■■■□□ 2.49
RIMBP3Q9UFD9 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC30.63■■■□□ 2.49
RIMBP3Q9UFD9 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC30.63■■■□□ 2.49
RIMBP3Q9UFD9 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC30.63■■■□□ 2.49
RIMBP3Q9UFD9 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
RIMBP3Q9UFD9 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC30.63■■■□□ 2.49
RIMBP3Q9UFD9 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
RIMBP3Q9UFD9 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC30.63■■■□□ 2.49
RIMBP3Q9UFD9 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC30.63■■■□□ 2.49
RIMBP3Q9UFD9 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC30.63■■■□□ 2.49
RIMBP3Q9UFD9 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC30.62■■■□□ 2.49
RIMBP3Q9UFD9 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
RIMBP3Q9UFD9 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC30.62■■■□□ 2.49
RIMBP3Q9UFD9 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
RIMBP3Q9UFD9 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC30.62■■■□□ 2.49
RIMBP3Q9UFD9 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC30.62■■■□□ 2.49
RIMBP3Q9UFD9 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
RIMBP3Q9UFD9 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
RIMBP3Q9UFD9 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC30.62■■■□□ 2.49
RIMBP3Q9UFD9 PUDP-206ENST00000540122 825 ntTSL 2 BASIC30.62■■■□□ 2.49
RIMBP3Q9UFD9 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC30.62■■■□□ 2.49
RIMBP3Q9UFD9 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC30.62■■■□□ 2.49
RIMBP3Q9UFD9 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC30.61■■■□□ 2.49
RIMBP3Q9UFD9 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC30.61■■■□□ 2.49
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms