Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TM9SF3Q9HD45 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC19.24■□□□□ 0.67
TM9SF3Q9HD45 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TM9SF3Q9HD45 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TM9SF3Q9HD45 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TM9SF3Q9HD45 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.24■□□□□ 0.67
TM9SF3Q9HD45 AL512408.1-201ENST00000569378 2000 ntBASIC19.24■□□□□ 0.67
TM9SF3Q9HD45 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TM9SF3Q9HD45 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
TM9SF3Q9HD45 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TM9SF3Q9HD45 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TM9SF3Q9HD45 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
TM9SF3Q9HD45 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TM9SF3Q9HD45 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
TM9SF3Q9HD45 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TM9SF3Q9HD45 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC19.23■□□□□ 0.67
TM9SF3Q9HD45 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
TM9SF3Q9HD45 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.23■□□□□ 0.67
TM9SF3Q9HD45 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
TM9SF3Q9HD45 DERL1-203ENST00000419562 918 ntTSL 2 BASIC19.23■□□□□ 0.67
TM9SF3Q9HD45 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC19.23■□□□□ 0.67
TM9SF3Q9HD45 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC19.23■□□□□ 0.67
TM9SF3Q9HD45 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC19.23■□□□□ 0.67
TM9SF3Q9HD45 AL138966.2-201ENST00000621997 464 ntBASIC19.23■□□□□ 0.67
TM9SF3Q9HD45 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
TM9SF3Q9HD45 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
TM9SF3Q9HD45 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.23■□□□□ 0.67
TM9SF3Q9HD45 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TM9SF3Q9HD45 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
TM9SF3Q9HD45 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TM9SF3Q9HD45 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.22■□□□□ 0.67
TM9SF3Q9HD45 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
TM9SF3Q9HD45 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TM9SF3Q9HD45 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TM9SF3Q9HD45 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
TM9SF3Q9HD45 AC007663.1-201ENST00000438948 1240 ntBASIC19.22■□□□□ 0.67
TM9SF3Q9HD45 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC19.22■□□□□ 0.67
TM9SF3Q9HD45 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC19.22■□□□□ 0.67
TM9SF3Q9HD45 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC19.22■□□□□ 0.67
TM9SF3Q9HD45 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC19.22■□□□□ 0.67
TM9SF3Q9HD45 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
TM9SF3Q9HD45 AC139887.4-201ENST00000607877 719 ntBASIC19.22■□□□□ 0.67
TM9SF3Q9HD45 AC010653.2-201ENST00000623505 997 ntBASIC19.22■□□□□ 0.67
TM9SF3Q9HD45 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
TM9SF3Q9HD45 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.22■□□□□ 0.67
TM9SF3Q9HD45 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC19.22■□□□□ 0.67
TM9SF3Q9HD45 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TM9SF3Q9HD45 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC19.22■□□□□ 0.67
TM9SF3Q9HD45 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TM9SF3Q9HD45 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.21■□□□□ 0.67
TM9SF3Q9HD45 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TM9SF3Q9HD45 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TM9SF3Q9HD45 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.21■□□□□ 0.67
TM9SF3Q9HD45 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TM9SF3Q9HD45 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.21■□□□□ 0.67
TM9SF3Q9HD45 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
TM9SF3Q9HD45 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TM9SF3Q9HD45 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.21■□□□□ 0.67
TM9SF3Q9HD45 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TM9SF3Q9HD45 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TM9SF3Q9HD45 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC19.21■□□□□ 0.67
TM9SF3Q9HD45 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
TM9SF3Q9HD45 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC19.21■□□□□ 0.67
TM9SF3Q9HD45 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC19.21■□□□□ 0.67
TM9SF3Q9HD45 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC19.21■□□□□ 0.67
TM9SF3Q9HD45 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC19.21■□□□□ 0.67
TM9SF3Q9HD45 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC19.21■□□□□ 0.67
TM9SF3Q9HD45 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC19.21■□□□□ 0.67
TM9SF3Q9HD45 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.21■□□□□ 0.67
TM9SF3Q9HD45 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TM9SF3Q9HD45 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
TM9SF3Q9HD45 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TM9SF3Q9HD45 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC19.21■□□□□ 0.67
TM9SF3Q9HD45 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC19.21■□□□□ 0.67
TM9SF3Q9HD45 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TM9SF3Q9HD45 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19.21■□□□□ 0.67
TM9SF3Q9HD45 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.66
TM9SF3Q9HD45 CD37-204ENST00000535669 1674 ntTSL 2 BASIC19.2■□□□□ 0.66
TM9SF3Q9HD45 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
TM9SF3Q9HD45 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TM9SF3Q9HD45 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC19.2■□□□□ 0.66
TM9SF3Q9HD45 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC19.2■□□□□ 0.66
TM9SF3Q9HD45 AC092338.2-201ENST00000568827 1415 ntBASIC19.2■□□□□ 0.66
TM9SF3Q9HD45 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TM9SF3Q9HD45 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC19.2■□□□□ 0.66
TM9SF3Q9HD45 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
TM9SF3Q9HD45 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC19.2■□□□□ 0.66
TM9SF3Q9HD45 RNF152P1-201ENST00000397754 604 ntBASIC19.2■□□□□ 0.66
TM9SF3Q9HD45 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TM9SF3Q9HD45 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
TM9SF3Q9HD45 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
TM9SF3Q9HD45 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.2■□□□□ 0.66
TM9SF3Q9HD45 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TM9SF3Q9HD45 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TM9SF3Q9HD45 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TM9SF3Q9HD45 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TM9SF3Q9HD45 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
TM9SF3Q9HD45 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
TM9SF3Q9HD45 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TM9SF3Q9HD45 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms