Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 AC091390.4-202ENST00000476426 537 ntBASIC19.74■□□□□ 0.75
RTL3Q8N8U3 DHDH-203ENST00000522614 776 ntTSL 5 BASIC19.74■□□□□ 0.75
RTL3Q8N8U3 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC19.74■□□□□ 0.75
RTL3Q8N8U3 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC19.74■□□□□ 0.75
RTL3Q8N8U3 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC19.74■□□□□ 0.75
RTL3Q8N8U3 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.74■□□□□ 0.75
RTL3Q8N8U3 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
RTL3Q8N8U3 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC19.74■□□□□ 0.75
RTL3Q8N8U3 MIR4785-201ENST00000585005 73 ntBASIC19.74■□□□□ 0.75
RTL3Q8N8U3 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC19.74■□□□□ 0.75
RTL3Q8N8U3 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC19.74■□□□□ 0.75
RTL3Q8N8U3 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC19.74■□□□□ 0.75
RTL3Q8N8U3 TEX21P-204ENST00000641479 1693 ntBASIC19.74■□□□□ 0.75
RTL3Q8N8U3 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
RTL3Q8N8U3 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC19.74■□□□□ 0.75
RTL3Q8N8U3 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
RTL3Q8N8U3 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RTL3Q8N8U3 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RTL3Q8N8U3 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
RTL3Q8N8U3 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RTL3Q8N8U3 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC19.73■□□□□ 0.75
RTL3Q8N8U3 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RTL3Q8N8U3 DERL1-203ENST00000419562 918 ntTSL 2 BASIC19.73■□□□□ 0.75
RTL3Q8N8U3 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC19.73■□□□□ 0.75
RTL3Q8N8U3 AC008040.2-201ENST00000461049 708 ntBASIC19.73■□□□□ 0.75
RTL3Q8N8U3 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC19.73■□□□□ 0.75
RTL3Q8N8U3 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC19.73■□□□□ 0.75
RTL3Q8N8U3 MIR4497-201ENST00000583208 89 ntBASIC19.73■□□□□ 0.75
RTL3Q8N8U3 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC19.73■□□□□ 0.75
RTL3Q8N8U3 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC19.73■□□□□ 0.75
RTL3Q8N8U3 AC011298.2-201ENST00000617989 482 ntBASIC19.73■□□□□ 0.75
RTL3Q8N8U3 AC130371.2-201ENST00000619443 611 ntBASIC19.73■□□□□ 0.75
RTL3Q8N8U3 DECR2-212ENST00000627716 352 ntTSL 2 BASIC19.73■□□□□ 0.75
RTL3Q8N8U3 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.73■□□□□ 0.75
RTL3Q8N8U3 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RTL3Q8N8U3 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
RTL3Q8N8U3 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.73■□□□□ 0.75
RTL3Q8N8U3 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
RTL3Q8N8U3 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RTL3Q8N8U3 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RTL3Q8N8U3 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RTL3Q8N8U3 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RTL3Q8N8U3 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RTL3Q8N8U3 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RTL3Q8N8U3 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.73■□□□□ 0.75
RTL3Q8N8U3 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.73■□□□□ 0.75
RTL3Q8N8U3 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
RTL3Q8N8U3 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
RTL3Q8N8U3 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RTL3Q8N8U3 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.72■□□□□ 0.75
RTL3Q8N8U3 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
RTL3Q8N8U3 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC19.72■□□□□ 0.75
RTL3Q8N8U3 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RTL3Q8N8U3 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RTL3Q8N8U3 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RTL3Q8N8U3 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
RTL3Q8N8U3 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC19.72■□□□□ 0.75
RTL3Q8N8U3 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RTL3Q8N8U3 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RTL3Q8N8U3 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC19.72■□□□□ 0.75
RTL3Q8N8U3 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.72■□□□□ 0.75
RTL3Q8N8U3 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC19.72■□□□□ 0.75
RTL3Q8N8U3 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC19.72■□□□□ 0.75
RTL3Q8N8U3 AP003071.4-201ENST00000562276 1284 ntBASIC19.72■□□□□ 0.75
RTL3Q8N8U3 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC19.72■□□□□ 0.75
RTL3Q8N8U3 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
RTL3Q8N8U3 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
RTL3Q8N8U3 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC19.72■□□□□ 0.75
RTL3Q8N8U3 REXO1L10P-201ENST00000615707 1290 ntBASIC19.72■□□□□ 0.75
RTL3Q8N8U3 REXO1L12P-201ENST00000622156 912 ntBASIC19.72■□□□□ 0.75
RTL3Q8N8U3 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RTL3Q8N8U3 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.72■□□□□ 0.75
RTL3Q8N8U3 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC19.72■□□□□ 0.75
RTL3Q8N8U3 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RTL3Q8N8U3 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RTL3Q8N8U3 AC141586.3-201ENST00000562166 1838 ntBASIC19.72■□□□□ 0.75
RTL3Q8N8U3 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RTL3Q8N8U3 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RTL3Q8N8U3 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
RTL3Q8N8U3 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RTL3Q8N8U3 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RTL3Q8N8U3 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
RTL3Q8N8U3 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
RTL3Q8N8U3 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RTL3Q8N8U3 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RTL3Q8N8U3 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC19.71■□□□□ 0.75
RTL3Q8N8U3 AL596275.1-201ENST00000423464 877 ntBASIC19.71■□□□□ 0.75
RTL3Q8N8U3 TSPY21P-201ENST00000433481 731 ntBASIC19.71■□□□□ 0.75
RTL3Q8N8U3 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
RTL3Q8N8U3 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RTL3Q8N8U3 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
RTL3Q8N8U3 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
RTL3Q8N8U3 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RTL3Q8N8U3 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.7■□□□□ 0.74
RTL3Q8N8U3 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC19.7■□□□□ 0.74
RTL3Q8N8U3 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RTL3Q8N8U3 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
RTL3Q8N8U3 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
RTL3Q8N8U3 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RTL3Q8N8U3 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms