Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC16.05■□□□□ 0.16
VPS13CQ709C8 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC16.05■□□□□ 0.16
VPS13CQ709C8 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
VPS13CQ709C8 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC16.05■□□□□ 0.16
VPS13CQ709C8 AC011498.5-201ENST00000592027 486 ntBASIC16.05■□□□□ 0.16
VPS13CQ709C8 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC16.05■□□□□ 0.16
VPS13CQ709C8 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
VPS13CQ709C8 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
VPS13CQ709C8 AC016734.2-201ENST00000624325 1377 ntBASIC16.04■□□□□ 0.16
VPS13CQ709C8 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC16.04■□□□□ 0.16
VPS13CQ709C8 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC16.04■□□□□ 0.16
VPS13CQ709C8 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
VPS13CQ709C8 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
VPS13CQ709C8 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC16.04■□□□□ 0.16
VPS13CQ709C8 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
VPS13CQ709C8 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
VPS13CQ709C8 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
VPS13CQ709C8 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
VPS13CQ709C8 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
VPS13CQ709C8 AP000593.1-201ENST00000393668 712 ntBASIC16.04■□□□□ 0.16
VPS13CQ709C8 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
VPS13CQ709C8 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
VPS13CQ709C8 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC16.04■□□□□ 0.16
VPS13CQ709C8 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
VPS13CQ709C8 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
VPS13CQ709C8 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
VPS13CQ709C8 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC16.04■□□□□ 0.16
VPS13CQ709C8 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
VPS13CQ709C8 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC16.04■□□□□ 0.16
VPS13CQ709C8 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC16.04■□□□□ 0.16
VPS13CQ709C8 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
VPS13CQ709C8 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
VPS13CQ709C8 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
VPS13CQ709C8 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC16.04■□□□□ 0.16
VPS13CQ709C8 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC16.04■□□□□ 0.16
VPS13CQ709C8 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
VPS13CQ709C8 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
VPS13CQ709C8 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
VPS13CQ709C8 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC16.03■□□□□ 0.16
VPS13CQ709C8 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
VPS13CQ709C8 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC16.03■□□□□ 0.16
VPS13CQ709C8 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC16.03■□□□□ 0.16
VPS13CQ709C8 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
VPS13CQ709C8 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
VPS13CQ709C8 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC16.03■□□□□ 0.16
VPS13CQ709C8 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
VPS13CQ709C8 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
VPS13CQ709C8 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
VPS13CQ709C8 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
VPS13CQ709C8 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
VPS13CQ709C8 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC16.03■□□□□ 0.16
VPS13CQ709C8 DERL1-203ENST00000419562 918 ntTSL 2 BASIC16.03■□□□□ 0.16
VPS13CQ709C8 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
VPS13CQ709C8 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
VPS13CQ709C8 KRT18P31-201ENST00000506277 1292 ntBASIC16.03■□□□□ 0.16
VPS13CQ709C8 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
VPS13CQ709C8 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC16.03■□□□□ 0.16
VPS13CQ709C8 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
VPS13CQ709C8 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC16.03■□□□□ 0.16
VPS13CQ709C8 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
VPS13CQ709C8 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
VPS13CQ709C8 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
VPS13CQ709C8 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
VPS13CQ709C8 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
VPS13CQ709C8 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
VPS13CQ709C8 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC16.03■□□□□ 0.16
VPS13CQ709C8 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC16.03■□□□□ 0.16
VPS13CQ709C8 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
VPS13CQ709C8 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
VPS13CQ709C8 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
VPS13CQ709C8 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
VPS13CQ709C8 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC16.02■□□□□ 0.16
VPS13CQ709C8 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC16.02■□□□□ 0.16
VPS13CQ709C8 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC16.02■□□□□ 0.16
VPS13CQ709C8 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
VPS13CQ709C8 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.16
VPS13CQ709C8 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
VPS13CQ709C8 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
VPS13CQ709C8 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
VPS13CQ709C8 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC16.02■□□□□ 0.16
VPS13CQ709C8 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC16.02■□□□□ 0.16
VPS13CQ709C8 AC092329.2-201ENST00000598402 547 ntBASIC16.02■□□□□ 0.16
VPS13CQ709C8 AP001271.2-201ENST00000624018 1556 ntBASIC16.02■□□□□ 0.16
VPS13CQ709C8 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
VPS13CQ709C8 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
VPS13CQ709C8 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC16.02■□□□□ 0.16
VPS13CQ709C8 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
VPS13CQ709C8 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
VPS13CQ709C8 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
VPS13CQ709C8 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
VPS13CQ709C8 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC16.02■□□□□ 0.15
VPS13CQ709C8 HLA-F-220ENST00000434407 884 ntBASIC16.02■□□□□ 0.15
VPS13CQ709C8 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
VPS13CQ709C8 KRT18P1-202ENST00000452408 1331 ntBASIC16.02■□□□□ 0.15
VPS13CQ709C8 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC16.02■□□□□ 0.15
VPS13CQ709C8 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
VPS13CQ709C8 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
VPS13CQ709C8 MIR4674-201ENST00000582457 87 ntBASIC16.02■□□□□ 0.15
VPS13CQ709C8 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
VPS13CQ709C8 IFNL4P1-201ENST00000607083 540 ntBASIC16.02■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms