Protein–RNA interactions for Protein: P29279

CTGF, Connective tissue growth factor, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTGFP29279 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC21.75■■□□□ 1.07
CTGFP29279 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC21.75■■□□□ 1.07
CTGFP29279 AC093525.10-201ENST00000625130 1569 ntBASIC21.74■■□□□ 1.07
CTGFP29279 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC21.74■■□□□ 1.07
CTGFP29279 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CTGFP29279 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
CTGFP29279 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CTGFP29279 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CTGFP29279 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC21.74■■□□□ 1.07
CTGFP29279 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC21.74■■□□□ 1.07
CTGFP29279 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC21.74■■□□□ 1.07
CTGFP29279 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CTGFP29279 HLA-F-220ENST00000434407 884 ntBASIC21.74■■□□□ 1.07
CTGFP29279 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC21.74■■□□□ 1.07
CTGFP29279 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CTGFP29279 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC21.74■■□□□ 1.07
CTGFP29279 AC106795.1-205ENST00000512851 1056 ntBASIC21.74■■□□□ 1.07
CTGFP29279 AP002469.2-201ENST00000531724 424 ntBASIC21.74■■□□□ 1.07
CTGFP29279 PNN-202ENST00000553331 656 ntTSL 3 BASIC21.74■■□□□ 1.07
CTGFP29279 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC21.74■■□□□ 1.07
CTGFP29279 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC21.74■■□□□ 1.07
CTGFP29279 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC21.74■■□□□ 1.07
CTGFP29279 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
CTGFP29279 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CTGFP29279 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
CTGFP29279 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC21.74■■□□□ 1.07
CTGFP29279 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CTGFP29279 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CTGFP29279 STK25-234ENST00000535007 2459 ntTSL 2 BASIC21.73■■□□□ 1.07
CTGFP29279 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
CTGFP29279 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC21.73■■□□□ 1.07
CTGFP29279 AC026310.3-201ENST00000625186 2373 ntBASIC21.73■■□□□ 1.07
CTGFP29279 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CTGFP29279 MRPL3P1-201ENST00000400109 1033 ntBASIC21.73■■□□□ 1.07
CTGFP29279 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC21.73■■□□□ 1.07
CTGFP29279 FOSL1P1-201ENST00000511041 816 ntBASIC21.73■■□□□ 1.07
CTGFP29279 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC21.73■■□□□ 1.07
CTGFP29279 RNF126P1-202ENST00000569893 925 ntBASIC21.73■■□□□ 1.07
CTGFP29279 ANKRD18DP-204ENST00000455355 1975 ntBASIC21.73■■□□□ 1.07
CTGFP29279 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CTGFP29279 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CTGFP29279 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CTGFP29279 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC21.73■■□□□ 1.07
CTGFP29279 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CTGFP29279 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC21.72■■□□□ 1.07
CTGFP29279 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CTGFP29279 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC21.72■■□□□ 1.07
CTGFP29279 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
CTGFP29279 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CTGFP29279 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CTGFP29279 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CTGFP29279 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CTGFP29279 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC21.72■■□□□ 1.07
CTGFP29279 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC21.72■■□□□ 1.07
CTGFP29279 DRAXINP1-201ENST00000437611 948 ntBASIC21.72■■□□□ 1.07
CTGFP29279 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC21.72■■□□□ 1.07
CTGFP29279 AP000867.3-201ENST00000524675 377 ntBASIC21.72■■□□□ 1.07
CTGFP29279 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC21.72■■□□□ 1.07
CTGFP29279 AC091304.2-201ENST00000564639 760 ntBASIC21.72■■□□□ 1.07
CTGFP29279 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC21.72■■□□□ 1.07
CTGFP29279 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CTGFP29279 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC21.72■■□□□ 1.07
CTGFP29279 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC21.72■■□□□ 1.07
CTGFP29279 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC21.72■■□□□ 1.07
CTGFP29279 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CTGFP29279 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC21.72■■□□□ 1.07
CTGFP29279 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CTGFP29279 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CTGFP29279 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
CTGFP29279 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CTGFP29279 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CTGFP29279 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CTGFP29279 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC21.71■■□□□ 1.07
CTGFP29279 AC036111.1-201ENST00000533973 1582 ntBASIC21.71■■□□□ 1.07
CTGFP29279 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC21.71■■□□□ 1.07
CTGFP29279 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
CTGFP29279 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CTGFP29279 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC21.71■■□□□ 1.07
CTGFP29279 SEC1P-202ENST00000473944 940 ntBASIC21.71■■□□□ 1.07
CTGFP29279 KRT18P31-201ENST00000506277 1292 ntBASIC21.71■■□□□ 1.07
CTGFP29279 CIB2-208ENST00000560618 804 ntTSL 2 BASIC21.71■■□□□ 1.07
CTGFP29279 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CTGFP29279 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC21.71■■□□□ 1.07
CTGFP29279 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CTGFP29279 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CTGFP29279 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CTGFP29279 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CTGFP29279 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
CTGFP29279 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC21.71■■□□□ 1.07
CTGFP29279 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
CTGFP29279 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CTGFP29279 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
CTGFP29279 TSPY22P-201ENST00000427496 604 ntBASIC21.7■■□□□ 1.06
CTGFP29279 LINC00265-3P-201ENST00000447588 903 ntBASIC21.7■■□□□ 1.06
CTGFP29279 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC21.7■■□□□ 1.06
CTGFP29279 AC079776.4-201ENST00000511039 504 ntBASIC21.7■■□□□ 1.06
CTGFP29279 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC21.7■■□□□ 1.06
CTGFP29279 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CTGFP29279 AL157888.1-201ENST00000631930 593 ntBASIC21.7■■□□□ 1.06
CTGFP29279 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms