Protein–RNA interactions for Protein: O00585

CCL21, C-C motif chemokine 21, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL21O00585 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CCL21O00585 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCL21O00585 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCL21O00585 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCL21O00585 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCL21O00585 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCL21O00585 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC16.94■□□□□ 0.3
CCL21O00585 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC16.94■□□□□ 0.3
CCL21O00585 PRELID1P1-202ENST00000567272 903 ntBASIC16.94■□□□□ 0.3
CCL21O00585 MIR3652-201ENST00000579335 131 ntBASIC16.94■□□□□ 0.3
CCL21O00585 PRR29-207ENST00000580752 458 ntTSL 3 BASIC16.94■□□□□ 0.3
CCL21O00585 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CCL21O00585 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCL21O00585 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
CCL21O00585 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC16.94■□□□□ 0.3
CCL21O00585 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CCL21O00585 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCL21O00585 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
CCL21O00585 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CCL21O00585 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CCL21O00585 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC16.94■□□□□ 0.3
CCL21O00585 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCL21O00585 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCL21O00585 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCL21O00585 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
CCL21O00585 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCL21O00585 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC16.93■□□□□ 0.3
CCL21O00585 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC16.93■□□□□ 0.3
CCL21O00585 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CCL21O00585 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCL21O00585 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
CCL21O00585 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCL21O00585 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CCL21O00585 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCL21O00585 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCL21O00585 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CCL21O00585 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCL21O00585 AL645929.1-201ENST00000420084 975 ntBASIC16.93■□□□□ 0.3
CCL21O00585 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CCL21O00585 AC034232.1-201ENST00000506026 1064 ntBASIC16.93■□□□□ 0.3
CCL21O00585 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC16.93■□□□□ 0.3
CCL21O00585 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC16.93■□□□□ 0.3
CCL21O00585 AC092329.2-201ENST00000598402 547 ntBASIC16.93■□□□□ 0.3
CCL21O00585 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCL21O00585 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
CCL21O00585 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCL21O00585 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CCL21O00585 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCL21O00585 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC16.92■□□□□ 0.3
CCL21O00585 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC16.92■□□□□ 0.3
CCL21O00585 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
CCL21O00585 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC16.92■□□□□ 0.3
CCL21O00585 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCL21O00585 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCL21O00585 AC020907.5-201ENST00000624372 1936 ntBASIC16.92■□□□□ 0.3
CCL21O00585 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CCL21O00585 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
CCL21O00585 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC16.92■□□□□ 0.3
CCL21O00585 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
CCL21O00585 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCL21O00585 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCL21O00585 HBZP1-201ENST00000354915 429 ntBASIC16.92■□□□□ 0.3
CCL21O00585 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
CCL21O00585 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCL21O00585 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC16.92■□□□□ 0.3
CCL21O00585 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCL21O00585 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC16.92■□□□□ 0.3
CCL21O00585 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC16.92■□□□□ 0.3
CCL21O00585 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC16.92■□□□□ 0.3
CCL21O00585 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC16.92■□□□□ 0.3
CCL21O00585 MIR4674-201ENST00000582457 87 ntBASIC16.92■□□□□ 0.3
CCL21O00585 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCL21O00585 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC16.92■□□□□ 0.3
CCL21O00585 CR769767.2-201ENST00000622735 460 ntBASIC16.92■□□□□ 0.3
CCL21O00585 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCL21O00585 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
CCL21O00585 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC16.92■□□□□ 0.3
CCL21O00585 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
CCL21O00585 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
CCL21O00585 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC16.92■□□□□ 0.3
CCL21O00585 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCL21O00585 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CCL21O00585 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCL21O00585 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC16.91■□□□□ 0.3
CCL21O00585 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCL21O00585 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
CCL21O00585 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
CCL21O00585 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CCL21O00585 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCL21O00585 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCL21O00585 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CCL21O00585 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCL21O00585 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
CCL21O00585 CNP-204ENST00000472031 1019 ntTSL 2 BASIC16.91■□□□□ 0.3
CCL21O00585 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
CCL21O00585 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCL21O00585 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCL21O00585 TBC1D3P2-202ENST00000577902 1649 ntBASIC16.91■□□□□ 0.3
CCL21O00585 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCL21O00585 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms