Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 PCNAP1-202ENST00000595299 752 ntBASIC2.32□□□□□ -2.04
HLA-DRB4X5D2U9 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC2.32□□□□□ -2.04
HLA-DRB4X5D2U9 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC2.32□□□□□ -2.04
HLA-DRB4X5D2U9 AL392112.1-201ENST00000605115 829 ntBASIC2.32□□□□□ -2.04
HLA-DRB4X5D2U9 MIR92B-201ENST00000607575 96 ntBASIC2.32□□□□□ -2.04
HLA-DRB4X5D2U9 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
HLA-DRB4X5D2U9 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
HLA-DRB4X5D2U9 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC2.32□□□□□ -2.04
HLA-DRB4X5D2U9 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC2.32□□□□□ -2.04
HLA-DRB4X5D2U9 AC244100.1-202ENST00000621554 382 ntBASIC2.32□□□□□ -2.04
HLA-DRB4X5D2U9 AC099506.2-201ENST00000623074 221 ntBASIC2.32□□□□□ -2.04
HLA-DRB4X5D2U9 AC090617.7-201ENST00000623952 126 ntBASIC2.32□□□□□ -2.04
HLA-DRB4X5D2U9 ABBA01000935.2-201ENST00000637477 838 ntBASIC2.32□□□□□ -2.04
HLA-DRB4X5D2U9 MIR622-201ENST00000638396 96 ntBASIC2.32□□□□□ -2.04
HLA-DRB4X5D2U9 MTND5P1-201ENST00000445440 1375 ntBASIC2.32□□□□□ -2.04
HLA-DRB4X5D2U9 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC2.32□□□□□ -2.04
HLA-DRB4X5D2U9 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC2.31□□□□□ -2.04
HLA-DRB4X5D2U9 RPL23AP57-201ENST00000332361 466 ntBASIC2.31□□□□□ -2.04
HLA-DRB4X5D2U9 SNORA63.1-201ENST00000362493 131 ntBASIC2.31□□□□□ -2.04
HLA-DRB4X5D2U9 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
HLA-DRB4X5D2U9 RNU6-317P-201ENST00000384031 107 ntBASIC2.31□□□□□ -2.04
HLA-DRB4X5D2U9 SNORD15B-201ENST00000384714 146 ntBASIC2.31□□□□□ -2.04
HLA-DRB4X5D2U9 RNA5SP171-201ENST00000391071 115 ntBASIC2.31□□□□□ -2.04
HLA-DRB4X5D2U9 RPL7P25-201ENST00000404151 721 ntBASIC2.31□□□□□ -2.04
HLA-DRB4X5D2U9 HNRNPDP2-201ENST00000406475 478 ntBASIC2.31□□□□□ -2.04
HLA-DRB4X5D2U9 RNU2-6P-201ENST00000411404 190 ntBASIC2.31□□□□□ -2.04
HLA-DRB4X5D2U9 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC2.31□□□□□ -2.04
HLA-DRB4X5D2U9 RFESDP1-201ENST00000422350 461 ntBASIC2.31□□□□□ -2.04
HLA-DRB4X5D2U9 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
HLA-DRB4X5D2U9 RPS12P18-201ENST00000442381 270 ntBASIC2.31□□□□□ -2.04
HLA-DRB4X5D2U9 AL590399.6-201ENST00000446396 307 ntBASIC2.31□□□□□ -2.04
HLA-DRB4X5D2U9 AL513343.1-201ENST00000451818 792 ntBASIC2.31□□□□□ -2.04
HLA-DRB4X5D2U9 RPL5P13-201ENST00000462840 709 ntBASIC2.31□□□□□ -2.04
HLA-DRB4X5D2U9 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC2.31□□□□□ -2.04
HLA-DRB4X5D2U9 MTCO3P35-201ENST00000485582 781 ntBASIC2.31□□□□□ -2.04
HLA-DRB4X5D2U9 RPL7P23-201ENST00000493874 747 ntBASIC2.31□□□□□ -2.04
HLA-DRB4X5D2U9 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC2.31□□□□□ -2.04
HLA-DRB4X5D2U9 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC2.31□□□□□ -2.04
HLA-DRB4X5D2U9 RNU6-826P-201ENST00000516827 104 ntBASIC2.31□□□□□ -2.04
HLA-DRB4X5D2U9 RN7SKP277-201ENST00000516895 283 ntBASIC2.31□□□□□ -2.04
HLA-DRB4X5D2U9 RNU6-56P-201ENST00000516986 93 ntBASIC2.31□□□□□ -2.04
HLA-DRB4X5D2U9 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
HLA-DRB4X5D2U9 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC2.31□□□□□ -2.04
HLA-DRB4X5D2U9 MIR3944-201ENST00000581277 108 ntBASIC2.31□□□□□ -2.04
HLA-DRB4X5D2U9 AC005242.1-201ENST00000585658 438 ntBASIC2.31□□□□□ -2.04
HLA-DRB4X5D2U9 AC009303.3-201ENST00000591103 736 ntBASIC2.31□□□□□ -2.04
HLA-DRB4X5D2U9 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC2.31□□□□□ -2.04
HLA-DRB4X5D2U9 AL627309.6-201ENST00000606857 840 ntBASIC2.31□□□□□ -2.04
HLA-DRB4X5D2U9 MIR7973-1-201ENST00000614683 76 ntBASIC2.31□□□□□ -2.04
HLA-DRB4X5D2U9 MIR7112-201ENST00000616126 65 ntBASIC2.31□□□□□ -2.04
HLA-DRB4X5D2U9 AC007342.8-201ENST00000623278 678 ntBASIC2.31□□□□□ -2.04
HLA-DRB4X5D2U9 MIR6733-201ENST00000635723 61 ntBASIC2.31□□□□□ -2.04
HLA-DRB4X5D2U9 OR5BR1P-201ENST00000524992 1330 ntBASIC2.31□□□□□ -2.04
HLA-DRB4X5D2U9 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC2.31□□□□□ -2.04
HLA-DRB4X5D2U9 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
HLA-DRB4X5D2U9 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
HLA-DRB4X5D2U9 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
HLA-DRB4X5D2U9 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
HLA-DRB4X5D2U9 SNORA38.1-201ENST00000364172 131 ntBASIC2.3□□□□□ -2.04
HLA-DRB4X5D2U9 AC109780.2-201ENST00000413467 845 ntBASIC2.3□□□□□ -2.04
HLA-DRB4X5D2U9 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC2.3□□□□□ -2.04
HLA-DRB4X5D2U9 SAR1AP4-201ENST00000429225 591 ntBASIC2.3□□□□□ -2.04
HLA-DRB4X5D2U9 OR6K1P-201ENST00000456766 971 ntBASIC2.3□□□□□ -2.04
HLA-DRB4X5D2U9 RPL7P49-201ENST00000471402 708 ntBASIC2.3□□□□□ -2.04
HLA-DRB4X5D2U9 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC2.3□□□□□ -2.04
HLA-DRB4X5D2U9 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC2.3□□□□□ -2.04
HLA-DRB4X5D2U9 ENSA-210ENST00000503241 574 ntTSL 3 BASIC2.3□□□□□ -2.04
HLA-DRB4X5D2U9 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.3□□□□□ -2.04
HLA-DRB4X5D2U9 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
HLA-DRB4X5D2U9 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC2.3□□□□□ -2.04
HLA-DRB4X5D2U9 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC2.3□□□□□ -2.04
HLA-DRB4X5D2U9 KLHL2P1-201ENST00000508691 521 ntBASIC2.3□□□□□ -2.04
HLA-DRB4X5D2U9 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC2.3□□□□□ -2.04
HLA-DRB4X5D2U9 RNU6-1073P-201ENST00000517182 106 ntBASIC2.3□□□□□ -2.04
HLA-DRB4X5D2U9 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC2.3□□□□□ -2.04
HLA-DRB4X5D2U9 AP001207.1-201ENST00000524051 481 ntBASIC2.3□□□□□ -2.04
HLA-DRB4X5D2U9 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC2.3□□□□□ -2.04
HLA-DRB4X5D2U9 CASP1-216ENST00000534497 825 ntTSL 5 BASIC2.3□□□□□ -2.04
HLA-DRB4X5D2U9 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC2.3□□□□□ -2.04
HLA-DRB4X5D2U9 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC2.3□□□□□ -2.04
HLA-DRB4X5D2U9 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC2.3□□□□□ -2.04
HLA-DRB4X5D2U9 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC2.3□□□□□ -2.04
HLA-DRB4X5D2U9 MTND4LP24-201ENST00000572277 291 ntBASIC2.3□□□□□ -2.04
HLA-DRB4X5D2U9 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC2.3□□□□□ -2.04
HLA-DRB4X5D2U9 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC2.3□□□□□ -2.04
HLA-DRB4X5D2U9 AC053481.3-201ENST00000577881 843 ntBASIC2.3□□□□□ -2.04
HLA-DRB4X5D2U9 MIR5004-201ENST00000579078 107 ntBASIC2.3□□□□□ -2.04
HLA-DRB4X5D2U9 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC2.3□□□□□ -2.04
HLA-DRB4X5D2U9 SRGNP1-201ENST00000603392 451 ntBASIC2.3□□□□□ -2.04
HLA-DRB4X5D2U9 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC2.3□□□□□ -2.04
HLA-DRB4X5D2U9 PRELID3BP8-201ENST00000604148 295 ntBASIC2.3□□□□□ -2.04
HLA-DRB4X5D2U9 AC069200.1-201ENST00000609511 323 ntBASIC2.3□□□□□ -2.04
HLA-DRB4X5D2U9 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.3□□□□□ -2.04
HLA-DRB4X5D2U9 AC018692.3-201ENST00000623929 123 ntBASIC2.3□□□□□ -2.04
HLA-DRB4X5D2U9 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC2.3□□□□□ -2.04
HLA-DRB4X5D2U9 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
HLA-DRB4X5D2U9 AC092435.3-201ENST00000565538 3654 ntBASIC2.3□□□□□ -2.04
HLA-DRB4X5D2U9 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
HLA-DRB4X5D2U9 AP003122.5-201ENST00000527668 3766 ntBASIC2.29□□□□□ -2.04
HLA-DRB4X5D2U9 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.29□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms