Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 HSPE1P25-201ENST00000455484 251 ntBASIC6.64□□□□□ -1.35
VPS9D1Q9Y2B5 AL136126.1-201ENST00000473603 402 ntBASIC6.64□□□□□ -1.35
VPS9D1Q9Y2B5 AC099340.1-201ENST00000475247 599 ntBASIC6.64□□□□□ -1.35
VPS9D1Q9Y2B5 CYCTP-201ENST00000504253 315 ntBASIC6.64□□□□□ -1.35
VPS9D1Q9Y2B5 AL390198.2-201ENST00000510553 222 ntBASIC6.64□□□□□ -1.35
VPS9D1Q9Y2B5 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC6.64□□□□□ -1.35
VPS9D1Q9Y2B5 ERHP1-201ENST00000523006 310 ntBASIC6.64□□□□□ -1.35
VPS9D1Q9Y2B5 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC6.64□□□□□ -1.35
VPS9D1Q9Y2B5 AC027667.1-201ENST00000545814 304 ntBASIC6.64□□□□□ -1.35
VPS9D1Q9Y2B5 H3F3AP1-201ENST00000559984 334 ntBASIC6.64□□□□□ -1.35
VPS9D1Q9Y2B5 AL133297.1-201ENST00000568149 404 ntTSL 2 BASIC6.64□□□□□ -1.35
VPS9D1Q9Y2B5 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
VPS9D1Q9Y2B5 AC020914.2-201ENST00000598220 430 ntTSL 4 BASIC6.64□□□□□ -1.35
VPS9D1Q9Y2B5 AL513218.1-201ENST00000606527 391 ntBASIC6.64□□□□□ -1.35
VPS9D1Q9Y2B5 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC6.64□□□□□ -1.35
VPS9D1Q9Y2B5 KLHL5-204ENST00000504108 2690 ntTSL 2 BASIC6.64□□□□□ -1.35
VPS9D1Q9Y2B5 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
VPS9D1Q9Y2B5 AC009779.8-201ENST00000641684 4384 ntBASIC6.64□□□□□ -1.35
VPS9D1Q9Y2B5 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
VPS9D1Q9Y2B5 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC6.64□□□□□ -1.35
VPS9D1Q9Y2B5 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
VPS9D1Q9Y2B5 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC6.64□□□□□ -1.35
VPS9D1Q9Y2B5 AC062022.1-201ENST00000451026 1684 ntBASIC6.64□□□□□ -1.35
VPS9D1Q9Y2B5 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
VPS9D1Q9Y2B5 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC6.64□□□□□ -1.35
VPS9D1Q9Y2B5 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
VPS9D1Q9Y2B5 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC6.64□□□□□ -1.35
VPS9D1Q9Y2B5 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC6.64□□□□□ -1.35
VPS9D1Q9Y2B5 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
VPS9D1Q9Y2B5 AC110597.1-201ENST00000562669 3176 ntBASIC6.63□□□□□ -1.35
VPS9D1Q9Y2B5 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC6.63□□□□□ -1.35
VPS9D1Q9Y2B5 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
VPS9D1Q9Y2B5 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC6.63□□□□□ -1.35
VPS9D1Q9Y2B5 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
VPS9D1Q9Y2B5 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
VPS9D1Q9Y2B5 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
VPS9D1Q9Y2B5 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
VPS9D1Q9Y2B5 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
VPS9D1Q9Y2B5 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
VPS9D1Q9Y2B5 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
VPS9D1Q9Y2B5 MOB4-201ENST00000233892 3785 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
VPS9D1Q9Y2B5 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
VPS9D1Q9Y2B5 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
VPS9D1Q9Y2B5 SNORA38B-201ENST00000363524 131 ntBASIC6.63□□□□□ -1.35
VPS9D1Q9Y2B5 RNA5SP512-201ENST00000364550 120 ntBASIC6.63□□□□□ -1.35
VPS9D1Q9Y2B5 RNA5SP152-201ENST00000365184 110 ntBASIC6.63□□□□□ -1.35
VPS9D1Q9Y2B5 RNU6-326P-201ENST00000365480 107 ntBASIC6.63□□□□□ -1.35
VPS9D1Q9Y2B5 RNU6-937P-201ENST00000384325 106 ntBASIC6.63□□□□□ -1.35
VPS9D1Q9Y2B5 Y_RNA.504-201ENST00000384481 104 ntBASIC6.63□□□□□ -1.35
VPS9D1Q9Y2B5 AL513475.1-201ENST00000406602 315 ntBASIC6.63□□□□□ -1.35
VPS9D1Q9Y2B5 AL136100.1-201ENST00000407696 330 ntBASIC6.63□□□□□ -1.35
VPS9D1Q9Y2B5 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
VPS9D1Q9Y2B5 RNU6-651P-201ENST00000411040 105 ntBASIC6.63□□□□□ -1.35
VPS9D1Q9Y2B5 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC6.63□□□□□ -1.35
VPS9D1Q9Y2B5 PMS2P3-203ENST00000422064 567 ntTSL 5 BASIC6.63□□□□□ -1.35
VPS9D1Q9Y2B5 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC6.63□□□□□ -1.35
VPS9D1Q9Y2B5 RPL3P11-201ENST00000434028 1146 ntBASIC6.63□□□□□ -1.35
VPS9D1Q9Y2B5 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC6.63□□□□□ -1.35
VPS9D1Q9Y2B5 HSP90AA5P-201ENST00000438353 2192 ntBASIC6.63□□□□□ -1.35
VPS9D1Q9Y2B5 RPS26P56-201ENST00000444468 240 ntBASIC6.63□□□□□ -1.35
VPS9D1Q9Y2B5 AC005077.1-201ENST00000449226 375 ntBASIC6.63□□□□□ -1.35
VPS9D1Q9Y2B5 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC6.63□□□□□ -1.35
VPS9D1Q9Y2B5 CUBNP3-201ENST00000457461 1784 ntBASIC6.63□□□□□ -1.35
VPS9D1Q9Y2B5 AC068522.1-201ENST00000482895 345 ntBASIC6.63□□□□□ -1.35
VPS9D1Q9Y2B5 AC010409.1-201ENST00000487382 476 ntBASIC6.63□□□□□ -1.35
VPS9D1Q9Y2B5 AC005726.1-201ENST00000494679 427 ntBASIC6.63□□□□□ -1.35
VPS9D1Q9Y2B5 AC135721.1-201ENST00000497954 479 ntBASIC6.63□□□□□ -1.35
VPS9D1Q9Y2B5 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC6.63□□□□□ -1.35
VPS9D1Q9Y2B5 OR7H2P-201ENST00000513483 306 ntBASIC6.63□□□□□ -1.35
VPS9D1Q9Y2B5 AC108471.1-201ENST00000513977 287 ntBASIC6.63□□□□□ -1.35
VPS9D1Q9Y2B5 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC6.63□□□□□ -1.35
VPS9D1Q9Y2B5 FBXO16-208ENST00000519471 398 ntTSL 2 BASIC6.63□□□□□ -1.35
VPS9D1Q9Y2B5 AC087369.1-201ENST00000520775 996 ntBASIC6.63□□□□□ -1.35
VPS9D1Q9Y2B5 AC090151.1-201ENST00000520784 730 ntBASIC6.63□□□□□ -1.35
VPS9D1Q9Y2B5 AP006245.1-201ENST00000522549 120 ntBASIC6.63□□□□□ -1.35
VPS9D1Q9Y2B5 WBP2NL-210ENST00000543212 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
VPS9D1Q9Y2B5 MDM2-232ENST00000544561 213 ntTSL 5 BASIC6.63□□□□□ -1.35
VPS9D1Q9Y2B5 OLR1-210ENST00000544577 924 ntTSL 5 BASIC6.63□□□□□ -1.35
VPS9D1Q9Y2B5 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC6.63□□□□□ -1.35
VPS9D1Q9Y2B5 AL356017.1-201ENST00000556796 594 ntTSL 4 BASIC6.63□□□□□ -1.35
VPS9D1Q9Y2B5 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC6.63□□□□□ -1.35
VPS9D1Q9Y2B5 MIR4301-201ENST00000577203 66 ntBASIC6.63□□□□□ -1.35
VPS9D1Q9Y2B5 MIR4679-2-201ENST00000578358 77 ntBASIC6.63□□□□□ -1.35
VPS9D1Q9Y2B5 MIR378H-201ENST00000579966 83 ntBASIC6.63□□□□□ -1.35
VPS9D1Q9Y2B5 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
VPS9D1Q9Y2B5 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC6.63□□□□□ -1.35
VPS9D1Q9Y2B5 ZNF658B-201ENST00000602828 3408 ntBASIC6.63□□□□□ -1.35
VPS9D1Q9Y2B5 CYCSP1-201ENST00000604815 315 ntBASIC6.63□□□□□ -1.35
VPS9D1Q9Y2B5 AC097467.4-201ENST00000605504 141 ntBASIC6.63□□□□□ -1.35
VPS9D1Q9Y2B5 TP53TG1_2.1-201ENST00000611226 182 ntBASIC6.63□□□□□ -1.35
VPS9D1Q9Y2B5 Metazoa_SRP.195-201ENST00000612667 287 ntBASIC6.63□□□□□ -1.35
VPS9D1Q9Y2B5 AC092747.4-201ENST00000620519 1861 ntBASIC6.63□□□□□ -1.35
VPS9D1Q9Y2B5 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC6.63□□□□□ -1.35
VPS9D1Q9Y2B5 AL596275.2-208ENST00000641192 594 ntBASIC6.63□□□□□ -1.35
VPS9D1Q9Y2B5 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC6.63□□□□□ -1.35
VPS9D1Q9Y2B5 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
VPS9D1Q9Y2B5 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC6.63□□□□□ -1.35
VPS9D1Q9Y2B5 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
VPS9D1Q9Y2B5 MRPS27-201ENST00000261413 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
VPS9D1Q9Y2B5 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 144.6 ms