Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC7.95□□□□□ -1.14
TRIM35Q9UPQ4 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC7.95□□□□□ -1.14
TRIM35Q9UPQ4 AC009643.2-201ENST00000603543 1448 ntBASIC7.95□□□□□ -1.14
TRIM35Q9UPQ4 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC7.94□□□□□ -1.14
TRIM35Q9UPQ4 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC7.94□□□□□ -1.14
TRIM35Q9UPQ4 SHQ1P1-201ENST00000437111 1544 ntBASIC7.94□□□□□ -1.14
TRIM35Q9UPQ4 CDK12-202ENST00000447079 8336 ntAPPRIS P3 TSL 1 (best) BASIC7.94□□□□□ -1.14
TRIM35Q9UPQ4 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
TRIM35Q9UPQ4 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC7.94□□□□□ -1.14
TRIM35Q9UPQ4 DICER1-201ENST00000343455 10277 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
TRIM35Q9UPQ4 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC7.94□□□□□ -1.14
TRIM35Q9UPQ4 AC008725.1-201ENST00000605123 2263 ntBASIC7.94□□□□□ -1.14
TRIM35Q9UPQ4 EOGT-210ENST00000615922 1931 ntBASIC7.94□□□□□ -1.14
TRIM35Q9UPQ4 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
TRIM35Q9UPQ4 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
TRIM35Q9UPQ4 RNA5SP273-201ENST00000362484 113 ntBASIC7.94□□□□□ -1.14
TRIM35Q9UPQ4 RNU6-278P-201ENST00000390945 109 ntBASIC7.94□□□□□ -1.14
TRIM35Q9UPQ4 AL034374.1-201ENST00000406329 351 ntBASIC7.94□□□□□ -1.14
TRIM35Q9UPQ4 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC7.94□□□□□ -1.14
TRIM35Q9UPQ4 AC016769.2-201ENST00000414815 475 ntBASIC7.94□□□□□ -1.14
TRIM35Q9UPQ4 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC7.94□□□□□ -1.14
TRIM35Q9UPQ4 BX842559.1-201ENST00000419615 532 ntBASIC7.94□□□□□ -1.14
TRIM35Q9UPQ4 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC7.94□□□□□ -1.14
TRIM35Q9UPQ4 RPL23AP81-201ENST00000455252 467 ntBASIC7.94□□□□□ -1.14
TRIM35Q9UPQ4 FPGT-203ENST00000467578 601 ntTSL 2 BASIC7.94□□□□□ -1.14
TRIM35Q9UPQ4 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC7.94□□□□□ -1.14
TRIM35Q9UPQ4 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC7.94□□□□□ -1.14
TRIM35Q9UPQ4 Y_RNA.687-201ENST00000516558 91 ntBASIC7.94□□□□□ -1.14
TRIM35Q9UPQ4 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC7.94□□□□□ -1.14
TRIM35Q9UPQ4 CYCSP27-201ENST00000527643 293 ntBASIC7.94□□□□□ -1.14
TRIM35Q9UPQ4 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
TRIM35Q9UPQ4 COX6CP3-201ENST00000580869 223 ntBASIC7.94□□□□□ -1.14
TRIM35Q9UPQ4 MIR4300-201ENST00000581016 96 ntBASIC7.94□□□□□ -1.14
TRIM35Q9UPQ4 PSMA6P4-201ENST00000603247 718 ntBASIC7.94□□□□□ -1.14
TRIM35Q9UPQ4 MIR1244-1-201ENST00000612829 85 ntBASIC7.94□□□□□ -1.14
TRIM35Q9UPQ4 MIR1244-3-201ENST00000635744 85 ntBASIC7.94□□□□□ -1.14
TRIM35Q9UPQ4 MIR1244-2-201ENST00000636449 85 ntBASIC7.94□□□□□ -1.14
TRIM35Q9UPQ4 MIR1244-4-202ENST00000636813 85 ntBASIC7.94□□□□□ -1.14
TRIM35Q9UPQ4 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
TRIM35Q9UPQ4 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC7.94□□□□□ -1.14
TRIM35Q9UPQ4 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC7.94□□□□□ -1.14
TRIM35Q9UPQ4 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC7.94□□□□□ -1.14
TRIM35Q9UPQ4 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC7.94□□□□□ -1.14
TRIM35Q9UPQ4 RASSF9-201ENST00000361228 5682 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
TRIM35Q9UPQ4 TCP11X1-202ENST00000622971 1372 ntBASIC7.94□□□□□ -1.14
TRIM35Q9UPQ4 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
TRIM35Q9UPQ4 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
TRIM35Q9UPQ4 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
TRIM35Q9UPQ4 FER-202ENST00000438717 1531 ntTSL 2 BASIC7.93□□□□□ -1.14
TRIM35Q9UPQ4 AL355488.2-201ENST00000609909 2850 ntBASIC7.93□□□□□ -1.14
TRIM35Q9UPQ4 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC7.93□□□□□ -1.14
TRIM35Q9UPQ4 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC7.93□□□□□ -1.14
TRIM35Q9UPQ4 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC7.93□□□□□ -1.14
TRIM35Q9UPQ4 AL138713.1-201ENST00000624026 2130 ntBASIC7.93□□□□□ -1.14
TRIM35Q9UPQ4 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
TRIM35Q9UPQ4 ANK2-212ENST00000506722 8051 ntAPPRIS ALT2 TSL 1 (best) BASIC7.93□□□□□ -1.14
TRIM35Q9UPQ4 Y_RNA.151-201ENST00000363566 112 ntBASIC7.93□□□□□ -1.14
TRIM35Q9UPQ4 CRP-204ENST00000368112 787 ntTSL 2 BASIC7.93□□□□□ -1.14
TRIM35Q9UPQ4 LCN1P2-201ENST00000372030 223 ntBASIC7.93□□□□□ -1.14
TRIM35Q9UPQ4 Y_RNA.541-201ENST00000384640 113 ntBASIC7.93□□□□□ -1.14
TRIM35Q9UPQ4 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC7.93□□□□□ -1.14
TRIM35Q9UPQ4 RPL23AP4-201ENST00000427757 463 ntBASIC7.93□□□□□ -1.14
TRIM35Q9UPQ4 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC7.93□□□□□ -1.14
TRIM35Q9UPQ4 AC093414.1-201ENST00000434712 514 ntBASIC7.93□□□□□ -1.14
TRIM35Q9UPQ4 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC7.93□□□□□ -1.14
TRIM35Q9UPQ4 CEACAMP9-201ENST00000442990 513 ntBASIC7.93□□□□□ -1.14
TRIM35Q9UPQ4 GAS5-218ENST00000448718 565 ntTSL 2 BASIC7.93□□□□□ -1.14
TRIM35Q9UPQ4 AL035690.1-201ENST00000490892 383 ntBASIC7.93□□□□□ -1.14
TRIM35Q9UPQ4 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC7.93□□□□□ -1.14
TRIM35Q9UPQ4 RANP3-201ENST00000530970 276 ntBASIC7.93□□□□□ -1.14
TRIM35Q9UPQ4 AC027288.2-201ENST00000553028 243 ntBASIC7.93□□□□□ -1.14
TRIM35Q9UPQ4 FAM174B-202ENST00000553393 495 ntTSL 2 BASIC7.93□□□□□ -1.14
TRIM35Q9UPQ4 AC007494.1-201ENST00000562293 760 ntBASIC7.93□□□□□ -1.14
TRIM35Q9UPQ4 RPL7P50-201ENST00000600588 727 ntBASIC7.93□□□□□ -1.14
TRIM35Q9UPQ4 AL359881.1-201ENST00000602916 267 ntBASIC7.93□□□□□ -1.14
TRIM35Q9UPQ4 AC006363.1-201ENST00000603806 463 ntBASIC7.93□□□□□ -1.14
TRIM35Q9UPQ4 AC007619.2-201ENST00000605743 379 ntBASIC7.93□□□□□ -1.14
TRIM35Q9UPQ4 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC7.93□□□□□ -1.14
TRIM35Q9UPQ4 RBBP8P1-201ENST00000449447 1844 ntBASIC7.93□□□□□ -1.14
TRIM35Q9UPQ4 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
TRIM35Q9UPQ4 AC016583.1-201ENST00000624221 2431 ntBASIC7.93□□□□□ -1.14
TRIM35Q9UPQ4 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC7.93□□□□□ -1.14
TRIM35Q9UPQ4 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC7.93□□□□□ -1.14
TRIM35Q9UPQ4 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
TRIM35Q9UPQ4 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
TRIM35Q9UPQ4 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
TRIM35Q9UPQ4 NDUFA4-201ENST00000339600 2130 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
TRIM35Q9UPQ4 AP003486.1-201ENST00000525716 3994 ntBASIC7.93□□□□□ -1.14
TRIM35Q9UPQ4 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
TRIM35Q9UPQ4 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC7.93□□□□□ -1.14
TRIM35Q9UPQ4 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC7.93□□□□□ -1.14
TRIM35Q9UPQ4 DDX60-201ENST00000393743 6071 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
TRIM35Q9UPQ4 MAPRE2-203ENST00000436190 4323 ntTSL 2 BASIC7.92□□□□□ -1.14
TRIM35Q9UPQ4 NACA-203ENST00000454682 6629 ntTSL 5 BASIC7.92□□□□□ -1.14
TRIM35Q9UPQ4 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC7.92□□□□□ -1.14
TRIM35Q9UPQ4 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC7.92□□□□□ -1.14
TRIM35Q9UPQ4 KLHL5-203ENST00000381930 3288 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
TRIM35Q9UPQ4 APELA-202ENST00000507152 2602 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
TRIM35Q9UPQ4 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC7.92□□□□□ -1.14
TRIM35Q9UPQ4 MRO-201ENST00000256425 5166 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 124.4 ms