Protein–RNA interactions for Protein: Q9UKS6

PACSIN3, Protein kinase C and casein kinase substrate in neurons protein 3, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3Q9UKS6 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC4.55□□□□□ -1.68
PACSIN3Q9UKS6 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.55□□□□□ -1.68
PACSIN3Q9UKS6 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
PACSIN3Q9UKS6 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.55□□□□□ -1.68
PACSIN3Q9UKS6 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
PACSIN3Q9UKS6 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC4.55□□□□□ -1.68
PACSIN3Q9UKS6 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.55□□□□□ -1.68
PACSIN3Q9UKS6 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
PACSIN3Q9UKS6 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
PACSIN3Q9UKS6 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
PACSIN3Q9UKS6 Y_RNA.1-201ENST00000352915 104 ntBASIC4.55□□□□□ -1.68
PACSIN3Q9UKS6 RNU1-94P-201ENST00000362627 173 ntBASIC4.55□□□□□ -1.68
PACSIN3Q9UKS6 RNU6-462P-201ENST00000362659 105 ntBASIC4.55□□□□□ -1.68
PACSIN3Q9UKS6 RNA5SP123-201ENST00000363244 119 ntBASIC4.55□□□□□ -1.68
PACSIN3Q9UKS6 RNY4P34-201ENST00000364779 95 ntBASIC4.55□□□□□ -1.68
PACSIN3Q9UKS6 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC4.55□□□□□ -1.68
PACSIN3Q9UKS6 NFIB-202ENST00000380924 840 ntTSL 5 BASIC4.55□□□□□ -1.68
PACSIN3Q9UKS6 RNU6-533P-201ENST00000384144 107 ntBASIC4.55□□□□□ -1.68
PACSIN3Q9UKS6 RNU6-809P-201ENST00000384461 107 ntBASIC4.55□□□□□ -1.68
PACSIN3Q9UKS6 RNA5SP372-201ENST00000390836 115 ntBASIC4.55□□□□□ -1.68
PACSIN3Q9UKS6 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
PACSIN3Q9UKS6 Z97832.1-201ENST00000402490 328 ntBASIC4.55□□□□□ -1.68
PACSIN3Q9UKS6 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
PACSIN3Q9UKS6 AL590004.1-201ENST00000405321 300 ntBASIC4.55□□□□□ -1.68
PACSIN3Q9UKS6 AL450338.1-201ENST00000407987 512 ntBASIC4.55□□□□□ -1.68
PACSIN3Q9UKS6 AC009237.10-201ENST00000414112 510 ntBASIC4.55□□□□□ -1.68
PACSIN3Q9UKS6 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC4.55□□□□□ -1.68
PACSIN3Q9UKS6 HMGB3P20-201ENST00000417997 600 ntBASIC4.55□□□□□ -1.68
PACSIN3Q9UKS6 AF186996.5-201ENST00000418098 904 ntBASIC4.55□□□□□ -1.68
PACSIN3Q9UKS6 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC4.55□□□□□ -1.68
PACSIN3Q9UKS6 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC4.55□□□□□ -1.68
PACSIN3Q9UKS6 NPM1P34-201ENST00000428821 893 ntBASIC4.55□□□□□ -1.68
PACSIN3Q9UKS6 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC4.55□□□□□ -1.68
PACSIN3Q9UKS6 AC009961.2-201ENST00000435771 251 ntBASIC4.55□□□□□ -1.68
PACSIN3Q9UKS6 RHOT1P3-201ENST00000436571 331 ntBASIC4.55□□□□□ -1.68
PACSIN3Q9UKS6 RABEPKP1-201ENST00000440529 1026 ntBASIC4.55□□□□□ -1.68
PACSIN3Q9UKS6 MTND6P13-201ENST00000443510 523 ntBASIC4.55□□□□□ -1.68
PACSIN3Q9UKS6 AC104651.2-201ENST00000447549 528 ntBASIC4.55□□□□□ -1.68
PACSIN3Q9UKS6 AC079448.1-201ENST00000449377 373 ntBASIC4.55□□□□□ -1.68
PACSIN3Q9UKS6 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC4.55□□□□□ -1.68
PACSIN3Q9UKS6 RPS3AP41-201ENST00000462701 778 ntBASIC4.55□□□□□ -1.68
PACSIN3Q9UKS6 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4.55□□□□□ -1.68
PACSIN3Q9UKS6 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
PACSIN3Q9UKS6 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC4.55□□□□□ -1.68
PACSIN3Q9UKS6 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC4.55□□□□□ -1.68
PACSIN3Q9UKS6 HMGN1P13-201ENST00000505795 138 ntBASIC4.55□□□□□ -1.68
PACSIN3Q9UKS6 AC098799.3-201ENST00000506095 438 ntBASIC4.55□□□□□ -1.68
PACSIN3Q9UKS6 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC4.55□□□□□ -1.68
PACSIN3Q9UKS6 AC108064.1-201ENST00000513791 460 ntBASIC4.55□□□□□ -1.68
PACSIN3Q9UKS6 RNA5SP43-201ENST00000516559 110 ntBASIC4.55□□□□□ -1.68
PACSIN3Q9UKS6 HMGB1P19-201ENST00000517578 577 ntBASIC4.55□□□□□ -1.68
PACSIN3Q9UKS6 CDH12P4-201ENST00000517835 295 ntBASIC4.55□□□□□ -1.68
PACSIN3Q9UKS6 CDH12P3-201ENST00000517935 295 ntBASIC4.55□□□□□ -1.68
PACSIN3Q9UKS6 CDH12P1-201ENST00000518435 295 ntBASIC4.55□□□□□ -1.68
PACSIN3Q9UKS6 AC134698.5-201ENST00000519444 336 ntBASIC4.55□□□□□ -1.68
PACSIN3Q9UKS6 IGLV3-26-201ENST00000520756 302 ntBASIC4.55□□□□□ -1.68
PACSIN3Q9UKS6 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC4.55□□□□□ -1.68
PACSIN3Q9UKS6 DEFB131D-201ENST00000526803 184 ntBASIC4.55□□□□□ -1.68
PACSIN3Q9UKS6 BRD9P1-201ENST00000529855 560 ntBASIC4.55□□□□□ -1.68
PACSIN3Q9UKS6 OR4A12P-201ENST00000530847 918 ntBASIC4.55□□□□□ -1.68
PACSIN3Q9UKS6 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.55□□□□□ -1.68
PACSIN3Q9UKS6 AC093027.1-201ENST00000546698 429 ntBASIC4.55□□□□□ -1.68
PACSIN3Q9UKS6 AL442663.2-201ENST00000554385 511 ntBASIC4.55□□□□□ -1.68
PACSIN3Q9UKS6 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.55□□□□□ -1.68
PACSIN3Q9UKS6 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC4.55□□□□□ -1.68
PACSIN3Q9UKS6 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC4.55□□□□□ -1.68
PACSIN3Q9UKS6 BNIP3P23-201ENST00000599655 511 ntBASIC4.55□□□□□ -1.68
PACSIN3Q9UKS6 AC087283.1-201ENST00000604029 1074 ntBASIC4.55□□□□□ -1.68
PACSIN3Q9UKS6 AC069304.2-201ENST00000605154 435 ntBASIC4.55□□□□□ -1.68
PACSIN3Q9UKS6 AL162730.1-201ENST00000605734 292 ntBASIC4.55□□□□□ -1.68
PACSIN3Q9UKS6 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC4.55□□□□□ -1.68
PACSIN3Q9UKS6 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC4.55□□□□□ -1.68
PACSIN3Q9UKS6 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC4.55□□□□□ -1.68
PACSIN3Q9UKS6 AC002550.2-201ENST00000621246 394 ntBASIC4.55□□□□□ -1.68
PACSIN3Q9UKS6 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
PACSIN3Q9UKS6 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
PACSIN3Q9UKS6 EOGT-210ENST00000615922 1931 ntBASIC4.54□□□□□ -1.68
PACSIN3Q9UKS6 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
PACSIN3Q9UKS6 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
PACSIN3Q9UKS6 Z95327.2-201ENST00000414579 1873 ntBASIC4.54□□□□□ -1.68
PACSIN3Q9UKS6 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.54□□□□□ -1.68
PACSIN3Q9UKS6 FRG1BP-201ENST00000278882 761 ntBASIC4.54□□□□□ -1.68
PACSIN3Q9UKS6 FRG1CP-201ENST00000358464 769 ntBASIC4.54□□□□□ -1.68
PACSIN3Q9UKS6 Y_RNA.86-201ENST00000363020 111 ntBASIC4.54□□□□□ -1.68
PACSIN3Q9UKS6 Y_RNA.326-201ENST00000365176 113 ntBASIC4.54□□□□□ -1.68
PACSIN3Q9UKS6 RNU6-1227P-201ENST00000383981 107 ntBASIC4.54□□□□□ -1.68
PACSIN3Q9UKS6 SNORA51.8-201ENST00000384234 132 ntBASIC4.54□□□□□ -1.68
PACSIN3Q9UKS6 Y_RNA.460-201ENST00000384255 102 ntBASIC4.54□□□□□ -1.68
PACSIN3Q9UKS6 MIR1302-11-201ENST00000408051 138 ntBASIC4.54□□□□□ -1.68
PACSIN3Q9UKS6 MIR1302-9-201ENST00000408365 138 ntBASIC4.54□□□□□ -1.68
PACSIN3Q9UKS6 MIR1302-10-201ENST00000408734 138 ntBASIC4.54□□□□□ -1.68
PACSIN3Q9UKS6 RNA5SP345-201ENST00000410646 108 ntBASIC4.54□□□□□ -1.68
PACSIN3Q9UKS6 RPL37P18-201ENST00000411602 243 ntBASIC4.54□□□□□ -1.68
PACSIN3Q9UKS6 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
PACSIN3Q9UKS6 RBMY2KP-201ENST00000418221 992 ntBASIC4.54□□□□□ -1.68
PACSIN3Q9UKS6 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC4.54□□□□□ -1.68
PACSIN3Q9UKS6 ZNF90P2-204ENST00000419323 1075 ntBASIC4.54□□□□□ -1.68
PACSIN3Q9UKS6 AL513185.2-201ENST00000425543 193 ntBASIC4.54□□□□□ -1.68
PACSIN3Q9UKS6 ISCA1P6-201ENST00000427740 390 ntBASIC4.54□□□□□ -1.68
PACSIN3Q9UKS6 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms