Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
RIMBP3Q9UFD9 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.26□□□□□ -1.73
RIMBP3Q9UFD9 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
RIMBP3Q9UFD9 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
RIMBP3Q9UFD9 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
RIMBP3Q9UFD9 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
RIMBP3Q9UFD9 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
RIMBP3Q9UFD9 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
RIMBP3Q9UFD9 RNU6-55P-201ENST00000411092 107 ntBASIC4.25□□□□□ -1.73
RIMBP3Q9UFD9 RNU6-954P-201ENST00000411355 107 ntBASIC4.25□□□□□ -1.73
RIMBP3Q9UFD9 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC4.25□□□□□ -1.73
RIMBP3Q9UFD9 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC4.25□□□□□ -1.73
RIMBP3Q9UFD9 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.25□□□□□ -1.73
RIMBP3Q9UFD9 HMGN1P5-201ENST00000448591 263 ntBASIC4.25□□□□□ -1.73
RIMBP3Q9UFD9 AC118282.1-201ENST00000506408 765 ntBASIC4.25□□□□□ -1.73
RIMBP3Q9UFD9 AC108471.1-201ENST00000513977 287 ntBASIC4.25□□□□□ -1.73
RIMBP3Q9UFD9 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
RIMBP3Q9UFD9 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
RIMBP3Q9UFD9 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC4.25□□□□□ -1.73
RIMBP3Q9UFD9 AP000526.1-201ENST00000603308 1388 ntBASIC4.25□□□□□ -1.73
RIMBP3Q9UFD9 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
RIMBP3Q9UFD9 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
RIMBP3Q9UFD9 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
RIMBP3Q9UFD9 AC093908.1-201ENST00000623125 8092 ntBASIC4.25□□□□□ -1.73
RIMBP3Q9UFD9 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
RIMBP3Q9UFD9 RPL9P6-201ENST00000492764 598 ntBASIC4.24□□□□□ -1.73
RIMBP3Q9UFD9 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC4.24□□□□□ -1.73
RIMBP3Q9UFD9 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC4.24□□□□□ -1.73
RIMBP3Q9UFD9 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC4.24□□□□□ -1.73
RIMBP3Q9UFD9 AC009101.1-201ENST00000568135 242 ntBASIC4.24□□□□□ -1.73
RIMBP3Q9UFD9 METTL8-218ENST00000638989 876 ntTSL 5 BASIC4.24□□□□□ -1.73
RIMBP3Q9UFD9 METTL8-219ENST00000640734 726 ntTSL 2 BASIC4.24□□□□□ -1.73
RIMBP3Q9UFD9 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
RIMBP3Q9UFD9 HSPA8P1-201ENST00000425843 1833 ntBASIC4.24□□□□□ -1.73
RIMBP3Q9UFD9 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
RIMBP3Q9UFD9 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.24□□□□□ -1.73
RIMBP3Q9UFD9 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC4.24□□□□□ -1.73
RIMBP3Q9UFD9 GCNT6-201ENST00000379591 934 ntBASIC4.24□□□□□ -1.73
RIMBP3Q9UFD9 RNU1-73P-201ENST00000383971 164 ntBASIC4.24□□□□□ -1.73
RIMBP3Q9UFD9 AL445213.1-201ENST00000412589 747 ntBASIC4.24□□□□□ -1.73
RIMBP3Q9UFD9 NANOGP5-201ENST00000424456 877 ntBASIC4.24□□□□□ -1.73
RIMBP3Q9UFD9 Z82205.1-201ENST00000428456 297 ntBASIC4.24□□□□□ -1.73
RIMBP3Q9UFD9 ISCA1P2-201ENST00000438679 421 ntBASIC4.24□□□□□ -1.73
RIMBP3Q9UFD9 MTCO3P20-201ENST00000454926 688 ntBASIC4.24□□□□□ -1.73
RIMBP3Q9UFD9 AC055855.1-201ENST00000489563 579 ntBASIC4.24□□□□□ -1.73
RIMBP3Q9UFD9 SUMO2P4-201ENST00000504193 276 ntBASIC4.24□□□□□ -1.73
RIMBP3Q9UFD9 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC4.24□□□□□ -1.73
RIMBP3Q9UFD9 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC4.24□□□□□ -1.73
RIMBP3Q9UFD9 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC4.24□□□□□ -1.73
RIMBP3Q9UFD9 SNORA35B-201ENST00000607417 129 ntBASIC4.24□□□□□ -1.73
RIMBP3Q9UFD9 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC4.24□□□□□ -1.73
RIMBP3Q9UFD9 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC4.24□□□□□ -1.73
RIMBP3Q9UFD9 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
RIMBP3Q9UFD9 OR10AB1P-202ENST00000641219 1686 ntBASIC4.23□□□□□ -1.73
RIMBP3Q9UFD9 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.23□□□□□ -1.73
RIMBP3Q9UFD9 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC4.23□□□□□ -1.73
RIMBP3Q9UFD9 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
RIMBP3Q9UFD9 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
RIMBP3Q9UFD9 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC4.23□□□□□ -1.73
RIMBP3Q9UFD9 SEPT7P3-201ENST00000455017 621 ntBASIC4.23□□□□□ -1.73
RIMBP3Q9UFD9 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC4.23□□□□□ -1.73
RIMBP3Q9UFD9 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
RIMBP3Q9UFD9 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
RIMBP3Q9UFD9 AC002524.1-201ENST00000411687 547 ntBASIC4.22□□□□□ -1.73
RIMBP3Q9UFD9 RPL23AP16-201ENST00000441715 421 ntBASIC4.22□□□□□ -1.73
RIMBP3Q9UFD9 RPL23AP42-201ENST00000471152 471 ntBASIC4.22□□□□□ -1.73
RIMBP3Q9UFD9 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
RIMBP3Q9UFD9 MTHFD2P4-201ENST00000515074 1025 ntBASIC4.22□□□□□ -1.73
RIMBP3Q9UFD9 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC4.22□□□□□ -1.73
RIMBP3Q9UFD9 OR5BN1P-201ENST00000532955 829 ntBASIC4.22□□□□□ -1.73
RIMBP3Q9UFD9 AC010928.3-201ENST00000587712 541 ntBASIC4.22□□□□□ -1.73
RIMBP3Q9UFD9 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC4.22□□□□□ -1.73
RIMBP3Q9UFD9 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC4.22□□□□□ -1.73
RIMBP3Q9UFD9 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.22□□□□□ -1.73
RIMBP3Q9UFD9 MTND5P12-201ENST00000502851 1449 ntBASIC4.22□□□□□ -1.73
RIMBP3Q9UFD9 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
RIMBP3Q9UFD9 AC000123.3-201ENST00000624029 4975 ntBASIC4.22□□□□□ -1.73
RIMBP3Q9UFD9 ATP8A2P3-201ENST00000426792 1536 ntBASIC4.22□□□□□ -1.73
RIMBP3Q9UFD9 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
RIMBP3Q9UFD9 PROS2P-201ENST00000474651 1951 ntBASIC4.21□□□□□ -1.73
RIMBP3Q9UFD9 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.73
RIMBP3Q9UFD9 SNORA17.3-201ENST00000391159 129 ntBASIC4.21□□□□□ -1.73
RIMBP3Q9UFD9 NPM1P10-201ENST00000398310 865 ntBASIC4.21□□□□□ -1.73
RIMBP3Q9UFD9 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.21□□□□□ -1.73
RIMBP3Q9UFD9 BX679664.1-201ENST00000434429 253 ntBASIC4.21□□□□□ -1.73
RIMBP3Q9UFD9 TAF9P1-201ENST00000445421 515 ntBASIC4.21□□□□□ -1.73
RIMBP3Q9UFD9 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC4.21□□□□□ -1.73
RIMBP3Q9UFD9 TAF9P2-201ENST00000454958 515 ntBASIC4.21□□□□□ -1.73
RIMBP3Q9UFD9 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.73
RIMBP3Q9UFD9 AL136981.2-201ENST00000617319 734 ntBASIC4.21□□□□□ -1.73
RIMBP3Q9UFD9 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
RIMBP3Q9UFD9 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC4.21□□□□□ -1.74
RIMBP3Q9UFD9 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC4.21□□□□□ -1.74
RIMBP3Q9UFD9 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
RIMBP3Q9UFD9 Y_RNA.122-201ENST00000363331 96 ntBASIC4.21□□□□□ -1.74
RIMBP3Q9UFD9 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC4.21□□□□□ -1.74
RIMBP3Q9UFD9 RNU4ATAC3P-201ENST00000516699 126 ntBASIC4.21□□□□□ -1.74
RIMBP3Q9UFD9 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
RIMBP3Q9UFD9 TRAV11-201ENST00000539512 339 ntBASIC4.21□□□□□ -1.74
RIMBP3Q9UFD9 CASC16-202ENST00000563844 610 ntTSL 3 BASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms