Protein–RNA interactions for Protein: Q9P0V3

SH3BP4, SH3 domain-binding protein 4, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3BP4Q9P0V3 NUP35P2-201ENST00000416748 943 ntBASIC4.39□□□□□ -1.71
SH3BP4Q9P0V3 USP9YP13-201ENST00000417797 480 ntBASIC4.39□□□□□ -1.71
SH3BP4Q9P0V3 AC083875.1-201ENST00000419509 405 ntBASIC4.39□□□□□ -1.71
SH3BP4Q9P0V3 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC4.39□□□□□ -1.71
SH3BP4Q9P0V3 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC4.39□□□□□ -1.71
SH3BP4Q9P0V3 AC010881.1-201ENST00000433830 235 ntBASIC4.39□□□□□ -1.71
SH3BP4Q9P0V3 MTCO1P27-201ENST00000448269 226 ntBASIC4.39□□□□□ -1.71
SH3BP4Q9P0V3 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC4.39□□□□□ -1.71
SH3BP4Q9P0V3 AC146507.1-201ENST00000468335 354 ntBASIC4.39□□□□□ -1.71
SH3BP4Q9P0V3 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC4.39□□□□□ -1.71
SH3BP4Q9P0V3 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC4.39□□□□□ -1.71
SH3BP4Q9P0V3 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC4.39□□□□□ -1.71
SH3BP4Q9P0V3 RPL7P24-201ENST00000493052 752 ntBASIC4.39□□□□□ -1.71
SH3BP4Q9P0V3 RPS4XP14-201ENST00000493072 781 ntBASIC4.39□□□□□ -1.71
SH3BP4Q9P0V3 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SH3BP4Q9P0V3 PRDX4P1-201ENST00000507189 574 ntBASIC4.39□□□□□ -1.71
SH3BP4Q9P0V3 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SH3BP4Q9P0V3 RN7SKP276-201ENST00000516242 268 ntBASIC4.39□□□□□ -1.71
SH3BP4Q9P0V3 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
SH3BP4Q9P0V3 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC4.39□□□□□ -1.71
SH3BP4Q9P0V3 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.39□□□□□ -1.71
SH3BP4Q9P0V3 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.39□□□□□ -1.71
SH3BP4Q9P0V3 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SH3BP4Q9P0V3 CYCSP28-201ENST00000534284 321 ntBASIC4.39□□□□□ -1.71
SH3BP4Q9P0V3 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.39□□□□□ -1.71
SH3BP4Q9P0V3 UBE2FP2-201ENST00000566646 462 ntBASIC4.39□□□□□ -1.71
SH3BP4Q9P0V3 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC4.39□□□□□ -1.71
SH3BP4Q9P0V3 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.39□□□□□ -1.71
SH3BP4Q9P0V3 MIR4458-201ENST00000578872 75 ntBASIC4.39□□□□□ -1.71
SH3BP4Q9P0V3 AC091178.1-203ENST00000584586 279 ntBASIC4.39□□□□□ -1.71
SH3BP4Q9P0V3 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SH3BP4Q9P0V3 HMGB2P1-201ENST00000591146 634 ntBASIC4.39□□□□□ -1.71
SH3BP4Q9P0V3 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.39□□□□□ -1.71
SH3BP4Q9P0V3 AC112187.2-201ENST00000604345 283 ntBASIC4.39□□□□□ -1.71
SH3BP4Q9P0V3 AL161729.4-201ENST00000604650 476 ntBASIC4.39□□□□□ -1.71
SH3BP4Q9P0V3 LARP7P1-201ENST00000605576 316 ntBASIC4.39□□□□□ -1.71
SH3BP4Q9P0V3 AC005609.4-201ENST00000625071 447 ntBASIC4.39□□□□□ -1.71
SH3BP4Q9P0V3 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.39□□□□□ -1.71
SH3BP4Q9P0V3 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SH3BP4Q9P0V3 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SH3BP4Q9P0V3 AC107081.3-201ENST00000612715 2034 ntBASIC4.39□□□□□ -1.71
SH3BP4Q9P0V3 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SH3BP4Q9P0V3 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
SH3BP4Q9P0V3 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SH3BP4Q9P0V3 EOGT-210ENST00000615922 1931 ntBASIC4.38□□□□□ -1.71
SH3BP4Q9P0V3 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SH3BP4Q9P0V3 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.38□□□□□ -1.71
SH3BP4Q9P0V3 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SH3BP4Q9P0V3 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SH3BP4Q9P0V3 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.38□□□□□ -1.71
SH3BP4Q9P0V3 NFIB-202ENST00000380924 840 ntTSL 5 BASIC4.38□□□□□ -1.71
SH3BP4Q9P0V3 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.38□□□□□ -1.71
SH3BP4Q9P0V3 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
SH3BP4Q9P0V3 U8.14-201ENST00000390843 143 ntBASIC4.38□□□□□ -1.71
SH3BP4Q9P0V3 SNORD115-47-201ENST00000391226 86 ntBASIC4.38□□□□□ -1.71
SH3BP4Q9P0V3 AL078604.1-201ENST00000404609 466 ntBASIC4.38□□□□□ -1.71
SH3BP4Q9P0V3 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC4.38□□□□□ -1.71
SH3BP4Q9P0V3 USP9YP6-201ENST00000413550 854 ntBASIC4.38□□□□□ -1.71
SH3BP4Q9P0V3 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SH3BP4Q9P0V3 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC4.38□□□□□ -1.71
SH3BP4Q9P0V3 AC140479.3-201ENST00000418944 1126 ntBASIC4.38□□□□□ -1.71
SH3BP4Q9P0V3 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC4.38□□□□□ -1.71
SH3BP4Q9P0V3 RPL7P30-201ENST00000420888 709 ntBASIC4.38□□□□□ -1.71
SH3BP4Q9P0V3 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SH3BP4Q9P0V3 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC4.38□□□□□ -1.71
SH3BP4Q9P0V3 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC4.38□□□□□ -1.71
SH3BP4Q9P0V3 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SH3BP4Q9P0V3 AC109583.1-201ENST00000432156 268 ntBASIC4.38□□□□□ -1.71
SH3BP4Q9P0V3 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC4.38□□□□□ -1.71
SH3BP4Q9P0V3 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC4.38□□□□□ -1.71
SH3BP4Q9P0V3 RPL7P36-201ENST00000444633 681 ntBASIC4.38□□□□□ -1.71
SH3BP4Q9P0V3 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC4.38□□□□□ -1.71
SH3BP4Q9P0V3 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC4.38□□□□□ -1.71
SH3BP4Q9P0V3 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SH3BP4Q9P0V3 USP9YP34-201ENST00000453983 808 ntBASIC4.38□□□□□ -1.71
SH3BP4Q9P0V3 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.38□□□□□ -1.71
SH3BP4Q9P0V3 RN7SL177P-201ENST00000476596 299 ntBASIC4.38□□□□□ -1.71
SH3BP4Q9P0V3 AC108022.1-201ENST00000493466 478 ntBASIC4.38□□□□□ -1.71
SH3BP4Q9P0V3 AC021678.1-201ENST00000505195 936 ntBASIC4.38□□□□□ -1.71
SH3BP4Q9P0V3 AC093809.1-201ENST00000509155 340 ntBASIC4.38□□□□□ -1.71
SH3BP4Q9P0V3 KCTD9P2-201ENST00000512203 1013 ntBASIC4.38□□□□□ -1.71
SH3BP4Q9P0V3 RNU6-314P-201ENST00000516574 104 ntBASIC4.38□□□□□ -1.71
SH3BP4Q9P0V3 SCARNA21.2-201ENST00000516600 166 ntBASIC4.38□□□□□ -1.71
SH3BP4Q9P0V3 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC4.38□□□□□ -1.71
SH3BP4Q9P0V3 ARL2BPP5-201ENST00000523141 481 ntBASIC4.38□□□□□ -1.71
SH3BP4Q9P0V3 MTND4LP18-201ENST00000526864 291 ntBASIC4.38□□□□□ -1.71
SH3BP4Q9P0V3 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.38□□□□□ -1.71
SH3BP4Q9P0V3 HMGB3P26-201ENST00000560051 582 ntBASIC4.38□□□□□ -1.71
SH3BP4Q9P0V3 AC124068.1-201ENST00000563131 678 ntBASIC4.38□□□□□ -1.71
SH3BP4Q9P0V3 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.38□□□□□ -1.71
SH3BP4Q9P0V3 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.38□□□□□ -1.71
SH3BP4Q9P0V3 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC4.38□□□□□ -1.71
SH3BP4Q9P0V3 MIR4646-201ENST00000580775 63 ntBASIC4.38□□□□□ -1.71
SH3BP4Q9P0V3 MIR3667-201ENST00000581025 74 ntBASIC4.38□□□□□ -1.71
SH3BP4Q9P0V3 AL512782.1-201ENST00000603093 364 ntBASIC4.38□□□□□ -1.71
SH3BP4Q9P0V3 AL031320.1-201ENST00000604177 357 ntBASIC4.38□□□□□ -1.71
SH3BP4Q9P0V3 AL133338.2-201ENST00000604292 736 ntBASIC4.38□□□□□ -1.71
SH3BP4Q9P0V3 AC090578.1-201ENST00000604955 591 ntBASIC4.38□□□□□ -1.71
SH3BP4Q9P0V3 BCRP9-201ENST00000605312 388 ntBASIC4.38□□□□□ -1.71
SH3BP4Q9P0V3 AP000894.4-201ENST00000610185 483 ntBASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms