Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 ARHGAP42P3-201ENST00000443989 2508 ntBASIC5.1□□□□□ -1.59
VTA1Q9NP79 MRPL48P1-201ENST00000445390 636 ntBASIC5.1□□□□□ -1.59
VTA1Q9NP79 AL589765.3-201ENST00000446084 462 ntBASIC5.1□□□□□ -1.59
VTA1Q9NP79 RPL23AP43-201ENST00000446445 471 ntBASIC5.1□□□□□ -1.59
VTA1Q9NP79 NUTF2P3-201ENST00000448540 384 ntBASIC5.1□□□□□ -1.59
VTA1Q9NP79 USP9YP12-201ENST00000450481 570 ntBASIC5.1□□□□□ -1.59
VTA1Q9NP79 OR6K1P-201ENST00000456766 971 ntBASIC5.1□□□□□ -1.59
VTA1Q9NP79 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC5.1□□□□□ -1.59
VTA1Q9NP79 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
VTA1Q9NP79 AC034222.1-201ENST00000494052 532 ntBASIC5.1□□□□□ -1.59
VTA1Q9NP79 AC112204.1-201ENST00000502591 103 ntBASIC5.1□□□□□ -1.59
VTA1Q9NP79 TXNP6-201ENST00000510190 310 ntBASIC5.1□□□□□ -1.59
VTA1Q9NP79 AC010625.1-201ENST00000511296 403 ntBASIC5.1□□□□□ -1.59
VTA1Q9NP79 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
VTA1Q9NP79 AP003392.2-201ENST00000527269 208 ntBASIC5.1□□□□□ -1.59
VTA1Q9NP79 AC022878.1-201ENST00000530684 149 ntBASIC5.1□□□□□ -1.59
VTA1Q9NP79 LINC00622-201ENST00000562811 1570 ntBASIC5.1□□□□□ -1.59
VTA1Q9NP79 AC007224.1-201ENST00000564410 144 ntBASIC5.1□□□□□ -1.59
VTA1Q9NP79 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC5.1□□□□□ -1.59
VTA1Q9NP79 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC5.1□□□□□ -1.59
VTA1Q9NP79 BNIP3P8-201ENST00000597863 560 ntBASIC5.1□□□□□ -1.59
VTA1Q9NP79 IPO5P1-202ENST00000600039 287 ntBASIC5.1□□□□□ -1.59
VTA1Q9NP79 BBIP1P1-201ENST00000602999 279 ntBASIC5.1□□□□□ -1.59
VTA1Q9NP79 AL355812.1-201ENST00000603215 216 ntBASIC5.1□□□□□ -1.59
VTA1Q9NP79 AC073648.5-201ENST00000603502 305 ntBASIC5.1□□□□□ -1.59
VTA1Q9NP79 ARF4P1-201ENST00000605447 541 ntBASIC5.1□□□□□ -1.59
VTA1Q9NP79 AC103710.4-201ENST00000609301 899 ntBASIC5.1□□□□□ -1.59
VTA1Q9NP79 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC5.1□□□□□ -1.59
VTA1Q9NP79 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC5.1□□□□□ -1.59
VTA1Q9NP79 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
VTA1Q9NP79 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
VTA1Q9NP79 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
VTA1Q9NP79 AL592437.2-201ENST00000421655 2434 ntBASIC5.09□□□□□ -1.59
VTA1Q9NP79 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
VTA1Q9NP79 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
VTA1Q9NP79 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC5.09□□□□□ -1.59
VTA1Q9NP79 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
VTA1Q9NP79 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
VTA1Q9NP79 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
VTA1Q9NP79 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC5.09□□□□□ -1.59
VTA1Q9NP79 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
VTA1Q9NP79 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
VTA1Q9NP79 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
VTA1Q9NP79 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
VTA1Q9NP79 RNA5SP515-201ENST00000364570 118 ntBASIC5.09□□□□□ -1.59
VTA1Q9NP79 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
VTA1Q9NP79 RNU6-1215P-201ENST00000384441 102 ntBASIC5.09□□□□□ -1.59
VTA1Q9NP79 MIR1271-201ENST00000408537 86 ntBASIC5.09□□□□□ -1.59
VTA1Q9NP79 RN7SKP33-201ENST00000410942 340 ntBASIC5.09□□□□□ -1.59
VTA1Q9NP79 RN7SKP247-201ENST00000411094 308 ntBASIC5.09□□□□□ -1.59
VTA1Q9NP79 RN7SKP263-201ENST00000411194 309 ntBASIC5.09□□□□□ -1.59
VTA1Q9NP79 MTCO1P21-201ENST00000416634 589 ntBASIC5.09□□□□□ -1.59
VTA1Q9NP79 MTATP6P27-201ENST00000416987 621 ntBASIC5.09□□□□□ -1.59
VTA1Q9NP79 AL513174.1-201ENST00000423182 629 ntBASIC5.09□□□□□ -1.59
VTA1Q9NP79 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC5.09□□□□□ -1.59
VTA1Q9NP79 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC5.09□□□□□ -1.59
VTA1Q9NP79 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC5.09□□□□□ -1.59
VTA1Q9NP79 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC5.09□□□□□ -1.59
VTA1Q9NP79 AL357520.1-201ENST00000441557 453 ntBASIC5.09□□□□□ -1.59
VTA1Q9NP79 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC5.09□□□□□ -1.59
VTA1Q9NP79 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC5.09□□□□□ -1.59
VTA1Q9NP79 HMGB3P21-201ENST00000452483 547 ntBASIC5.09□□□□□ -1.59
VTA1Q9NP79 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC5.09□□□□□ -1.59
VTA1Q9NP79 SRRM1P2-201ENST00000464531 1192 ntBASIC5.09□□□□□ -1.59
VTA1Q9NP79 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
VTA1Q9NP79 AC011825.1-201ENST00000484967 388 ntBASIC5.09□□□□□ -1.59
VTA1Q9NP79 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC5.09□□□□□ -1.59
VTA1Q9NP79 AL117351.2-201ENST00000513571 157 ntBASIC5.09□□□□□ -1.59
VTA1Q9NP79 HMGB1P19-201ENST00000517578 577 ntBASIC5.09□□□□□ -1.59
VTA1Q9NP79 MTND4LP18-201ENST00000526864 291 ntBASIC5.09□□□□□ -1.59
VTA1Q9NP79 CYCSP29-201ENST00000533731 318 ntBASIC5.09□□□□□ -1.59
VTA1Q9NP79 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC5.09□□□□□ -1.59
VTA1Q9NP79 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC5.09□□□□□ -1.59
VTA1Q9NP79 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC5.09□□□□□ -1.59
VTA1Q9NP79 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
VTA1Q9NP79 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC5.09□□□□□ -1.59
VTA1Q9NP79 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
VTA1Q9NP79 AC090312.1-201ENST00000580637 348 ntBASIC5.09□□□□□ -1.59
VTA1Q9NP79 TPMTP1-201ENST00000592307 737 ntBASIC5.09□□□□□ -1.59
VTA1Q9NP79 AL359999.1-201ENST00000604513 294 ntBASIC5.09□□□□□ -1.59
VTA1Q9NP79 AL021997.1-201ENST00000605757 193 ntBASIC5.09□□□□□ -1.59
VTA1Q9NP79 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC5.09□□□□□ -1.59
VTA1Q9NP79 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC5.09□□□□□ -1.59
VTA1Q9NP79 AL603839.4-201ENST00000624658 1005 ntBASIC5.09□□□□□ -1.59
VTA1Q9NP79 MIR4496-201ENST00000635896 61 ntBASIC5.09□□□□□ -1.59
VTA1Q9NP79 CRYM-AS1-204ENST00000637983 556 ntBASIC5.09□□□□□ -1.59
VTA1Q9NP79 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
VTA1Q9NP79 AP000542.2-201ENST00000623199 6179 ntBASIC5.09□□□□□ -1.59
VTA1Q9NP79 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
VTA1Q9NP79 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
VTA1Q9NP79 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
VTA1Q9NP79 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
VTA1Q9NP79 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
VTA1Q9NP79 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC5.09□□□□□ -1.6
VTA1Q9NP79 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC5.09□□□□□ -1.6
VTA1Q9NP79 ZNF33BP1-201ENST00000452497 1834 ntBASIC5.09□□□□□ -1.6
VTA1Q9NP79 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
VTA1Q9NP79 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC5.08□□□□□ -1.6
VTA1Q9NP79 IQCB2P-201ENST00000401788 1633 ntBASIC5.08□□□□□ -1.6
VTA1Q9NP79 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms