Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 AL139344.1-201ENST00000605228 195 ntBASIC4.23□□□□□ -1.73
UPF2Q9HAU5 AC097065.2-201ENST00000608159 533 ntBASIC4.23□□□□□ -1.73
UPF2Q9HAU5 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
UPF2Q9HAU5 GMFB-210ENST00000628554 639 ntTSL 4 BASIC4.23□□□□□ -1.73
UPF2Q9HAU5 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
UPF2Q9HAU5 ZNF542P-204ENST00000482727 1305 ntBASIC4.22□□□□□ -1.73
UPF2Q9HAU5 POMP-202ENST00000460403 1428 ntTSL 3 BASIC4.22□□□□□ -1.73
UPF2Q9HAU5 AC032011.1-201ENST00000611703 1549 ntBASIC4.22□□□□□ -1.73
UPF2Q9HAU5 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
UPF2Q9HAU5 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
UPF2Q9HAU5 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
UPF2Q9HAU5 SNORD6-201ENST00000365444 73 ntBASIC4.22□□□□□ -1.73
UPF2Q9HAU5 SNORD116.1-201ENST00000365628 92 ntBASIC4.22□□□□□ -1.73
UPF2Q9HAU5 RFX3-203ENST00000381984 364 ntTSL 3 BASIC4.22□□□□□ -1.73
UPF2Q9HAU5 RNU6-636P-201ENST00000384598 107 ntBASIC4.22□□□□□ -1.73
UPF2Q9HAU5 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
UPF2Q9HAU5 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC4.22□□□□□ -1.73
UPF2Q9HAU5 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC4.22□□□□□ -1.73
UPF2Q9HAU5 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.22□□□□□ -1.73
UPF2Q9HAU5 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC4.22□□□□□ -1.73
UPF2Q9HAU5 AC092170.1-201ENST00000440211 356 ntBASIC4.22□□□□□ -1.73
UPF2Q9HAU5 TPTE2P6-202ENST00000445572 1007 ntBASIC4.22□□□□□ -1.73
UPF2Q9HAU5 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC4.22□□□□□ -1.73
UPF2Q9HAU5 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC4.22□□□□□ -1.73
UPF2Q9HAU5 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC4.22□□□□□ -1.73
UPF2Q9HAU5 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC4.22□□□□□ -1.73
UPF2Q9HAU5 DNAJC19P8-201ENST00000452887 259 ntBASIC4.22□□□□□ -1.73
UPF2Q9HAU5 USP9YP25-201ENST00000457708 443 ntBASIC4.22□□□□□ -1.73
UPF2Q9HAU5 AC079203.1-201ENST00000487972 404 ntBASIC4.22□□□□□ -1.73
UPF2Q9HAU5 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC4.22□□□□□ -1.73
UPF2Q9HAU5 AC108064.1-201ENST00000513791 460 ntBASIC4.22□□□□□ -1.73
UPF2Q9HAU5 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC4.22□□□□□ -1.73
UPF2Q9HAU5 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC4.22□□□□□ -1.73
UPF2Q9HAU5 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC4.22□□□□□ -1.73
UPF2Q9HAU5 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC4.22□□□□□ -1.73
UPF2Q9HAU5 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC4.22□□□□□ -1.73
UPF2Q9HAU5 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC4.22□□□□□ -1.73
UPF2Q9HAU5 MRPS36P5-201ENST00000551909 298 ntBASIC4.22□□□□□ -1.73
UPF2Q9HAU5 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC4.22□□□□□ -1.73
UPF2Q9HAU5 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC4.22□□□□□ -1.73
UPF2Q9HAU5 AC009094.1-201ENST00000564443 426 ntBASIC4.22□□□□□ -1.73
UPF2Q9HAU5 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC4.22□□□□□ -1.73
UPF2Q9HAU5 VN1R83P-201ENST00000595685 445 ntBASIC4.22□□□□□ -1.73
UPF2Q9HAU5 AC125494.3-201ENST00000602759 455 ntBASIC4.22□□□□□ -1.73
UPF2Q9HAU5 AL020997.3-201ENST00000602843 359 ntBASIC4.22□□□□□ -1.73
UPF2Q9HAU5 AC010857.1-201ENST00000606398 594 ntBASIC4.22□□□□□ -1.73
UPF2Q9HAU5 AC093783.1-201ENST00000612976 329 ntBASIC4.22□□□□□ -1.73
UPF2Q9HAU5 AC024595.1-201ENST00000623088 387 ntBASIC4.22□□□□□ -1.73
UPF2Q9HAU5 LINC02211-204ENST00000642024 1070 ntBASIC4.22□□□□□ -1.73
UPF2Q9HAU5 SEC63P2-201ENST00000503863 1939 ntBASIC4.22□□□□□ -1.73
UPF2Q9HAU5 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC4.22□□□□□ -1.73
UPF2Q9HAU5 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
UPF2Q9HAU5 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
UPF2Q9HAU5 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
UPF2Q9HAU5 AC073055.1-201ENST00000456901 1621 ntBASIC4.21□□□□□ -1.73
UPF2Q9HAU5 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
UPF2Q9HAU5 FRG1CP-201ENST00000358464 769 ntBASIC4.21□□□□□ -1.74
UPF2Q9HAU5 RNU4-92P-201ENST00000363783 136 ntBASIC4.21□□□□□ -1.74
UPF2Q9HAU5 RNU4-40P-201ENST00000364351 143 ntBASIC4.21□□□□□ -1.74
UPF2Q9HAU5 SNORA40.2-201ENST00000390847 128 ntBASIC4.21□□□□□ -1.74
UPF2Q9HAU5 RPL32P23-201ENST00000397237 405 ntBASIC4.21□□□□□ -1.74
UPF2Q9HAU5 AC119751.3-201ENST00000399720 670 ntBASIC4.21□□□□□ -1.74
UPF2Q9HAU5 RNU6-575P-201ENST00000411326 105 ntBASIC4.21□□□□□ -1.74
UPF2Q9HAU5 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC4.21□□□□□ -1.74
UPF2Q9HAU5 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC4.21□□□□□ -1.74
UPF2Q9HAU5 RPL30P3-201ENST00000424262 333 ntBASIC4.21□□□□□ -1.74
UPF2Q9HAU5 BX890604.2-201ENST00000427883 474 ntBASIC4.21□□□□□ -1.74
UPF2Q9HAU5 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC4.21□□□□□ -1.74
UPF2Q9HAU5 ISCA1P2-201ENST00000438679 421 ntBASIC4.21□□□□□ -1.74
UPF2Q9HAU5 EEF1A1P39-201ENST00000440791 250 ntBASIC4.21□□□□□ -1.74
UPF2Q9HAU5 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC4.21□□□□□ -1.74
UPF2Q9HAU5 AL929288.2-201ENST00000446368 407 ntBASIC4.21□□□□□ -1.74
UPF2Q9HAU5 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC4.21□□□□□ -1.74
UPF2Q9HAU5 AC233982.1-201ENST00000451247 436 ntBASIC4.21□□□□□ -1.74
UPF2Q9HAU5 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC4.21□□□□□ -1.74
UPF2Q9HAU5 RPS27P29-201ENST00000463110 252 ntBASIC4.21□□□□□ -1.74
UPF2Q9HAU5 RPS20P21-201ENST00000466859 343 ntBASIC4.21□□□□□ -1.74
UPF2Q9HAU5 AC004263.1-201ENST00000479327 332 ntBASIC4.21□□□□□ -1.74
UPF2Q9HAU5 AC093267.1-201ENST00000489176 961 ntBASIC4.21□□□□□ -1.74
UPF2Q9HAU5 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC4.21□□□□□ -1.74
UPF2Q9HAU5 RNU4ATAC15P-201ENST00000516415 126 ntBASIC4.21□□□□□ -1.74
UPF2Q9HAU5 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC4.21□□□□□ -1.74
UPF2Q9HAU5 IGKV2-36-201ENST00000519999 223 ntBASIC4.21□□□□□ -1.74
UPF2Q9HAU5 AC022790.1-201ENST00000522872 204 ntBASIC4.21□□□□□ -1.74
UPF2Q9HAU5 RGS5-218ENST00000526176 574 ntTSL 4 BASIC4.21□□□□□ -1.74
UPF2Q9HAU5 AC145350.1-201ENST00000567426 208 ntBASIC4.21□□□□□ -1.74
UPF2Q9HAU5 MTND4LP24-201ENST00000572277 291 ntBASIC4.21□□□□□ -1.74
UPF2Q9HAU5 MIR4458-201ENST00000578872 75 ntBASIC4.21□□□□□ -1.74
UPF2Q9HAU5 NIFKP6-201ENST00000598115 845 ntBASIC4.21□□□□□ -1.74
UPF2Q9HAU5 AL590392.1-201ENST00000604960 446 ntBASIC4.21□□□□□ -1.74
UPF2Q9HAU5 AL049634.3-201ENST00000604968 457 ntBASIC4.21□□□□□ -1.74
UPF2Q9HAU5 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC4.21□□□□□ -1.74
UPF2Q9HAU5 AC017037.3-201ENST00000625016 472 ntBASIC4.21□□□□□ -1.74
UPF2Q9HAU5 AC090897.3-201ENST00000636973 1157 ntBASIC4.21□□□□□ -1.74
UPF2Q9HAU5 ZNF876P-202ENST00000398732 1485 ntBASIC4.21□□□□□ -1.74
UPF2Q9HAU5 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
UPF2Q9HAU5 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
UPF2Q9HAU5 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.21□□□□□ -1.74
UPF2Q9HAU5 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC4.21□□□□□ -1.74
UPF2Q9HAU5 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms