Protein–RNA interactions for Protein: Q9H6U6

BCAS3, Breast carcinoma-amplified sequence 3, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS3Q9H6U6 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC5.3□□□□□ -1.56
BCAS3Q9H6U6 SDCBPP1-201ENST00000440192 890 ntBASIC5.3□□□□□ -1.56
BCAS3Q9H6U6 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC5.3□□□□□ -1.56
BCAS3Q9H6U6 MTND4P19-201ENST00000446659 478 ntBASIC5.3□□□□□ -1.56
BCAS3Q9H6U6 FABP3P2-201ENST00000453169 399 ntBASIC5.3□□□□□ -1.56
BCAS3Q9H6U6 MTCO3P20-201ENST00000454926 688 ntBASIC5.3□□□□□ -1.56
BCAS3Q9H6U6 AC013356.1-201ENST00000489027 564 ntBASIC5.3□□□□□ -1.56
BCAS3Q9H6U6 AC007182.2-201ENST00000489251 402 ntBASIC5.3□□□□□ -1.56
BCAS3Q9H6U6 AC026979.1-201ENST00000492525 396 ntBASIC5.3□□□□□ -1.56
BCAS3Q9H6U6 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC5.3□□□□□ -1.56
BCAS3Q9H6U6 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
BCAS3Q9H6U6 HSPA8P13-201ENST00000523715 472 ntBASIC5.3□□□□□ -1.56
BCAS3Q9H6U6 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC5.3□□□□□ -1.56
BCAS3Q9H6U6 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC5.3□□□□□ -1.56
BCAS3Q9H6U6 AP001781.1-201ENST00000530977 207 ntBASIC5.3□□□□□ -1.56
BCAS3Q9H6U6 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC5.3□□□□□ -1.56
BCAS3Q9H6U6 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC5.3□□□□□ -1.56
BCAS3Q9H6U6 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC5.3□□□□□ -1.56
BCAS3Q9H6U6 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.3□□□□□ -1.56
BCAS3Q9H6U6 AC007424.1-203ENST00000554613 687 ntBASIC5.3□□□□□ -1.56
BCAS3Q9H6U6 AL845331.3-202ENST00000562856 261 ntBASIC5.3□□□□□ -1.56
BCAS3Q9H6U6 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC5.3□□□□□ -1.56
BCAS3Q9H6U6 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
BCAS3Q9H6U6 AC022884.3-201ENST00000579571 248 ntBASIC5.3□□□□□ -1.56
BCAS3Q9H6U6 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC5.3□□□□□ -1.56
BCAS3Q9H6U6 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC5.3□□□□□ -1.56
BCAS3Q9H6U6 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC5.3□□□□□ -1.56
BCAS3Q9H6U6 MIR1302-2-201ENST00000607096 138 ntBASIC5.3□□□□□ -1.56
BCAS3Q9H6U6 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC5.3□□□□□ -1.56
BCAS3Q9H6U6 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC5.3□□□□□ -1.56
BCAS3Q9H6U6 AC091905.1-201ENST00000624400 311 ntBASIC5.3□□□□□ -1.56
BCAS3Q9H6U6 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
BCAS3Q9H6U6 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.3□□□□□ -1.56
BCAS3Q9H6U6 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.3□□□□□ -1.56
BCAS3Q9H6U6 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
BCAS3Q9H6U6 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC5.3□□□□□ -1.56
BCAS3Q9H6U6 CARF-203ENST00000414439 2099 ntTSL 2 BASIC5.3□□□□□ -1.56
BCAS3Q9H6U6 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.3□□□□□ -1.56
BCAS3Q9H6U6 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
BCAS3Q9H6U6 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
BCAS3Q9H6U6 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
BCAS3Q9H6U6 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
BCAS3Q9H6U6 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC5.29□□□□□ -1.56
BCAS3Q9H6U6 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
BCAS3Q9H6U6 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
BCAS3Q9H6U6 SNORA63-201ENST00000363450 132 ntBASIC5.29□□□□□ -1.56
BCAS3Q9H6U6 AC068538.1-201ENST00000376856 336 ntBASIC5.29□□□□□ -1.56
BCAS3Q9H6U6 NFIB-202ENST00000380924 840 ntTSL 5 BASIC5.29□□□□□ -1.56
BCAS3Q9H6U6 Y_RNA.409-201ENST00000383990 98 ntBASIC5.29□□□□□ -1.56
BCAS3Q9H6U6 AL590762.2-201ENST00000395798 571 ntBASIC5.29□□□□□ -1.56
BCAS3Q9H6U6 SNX10-203ENST00000409367 746 ntTSL 5 BASIC5.29□□□□□ -1.56
BCAS3Q9H6U6 AL591848.1-201ENST00000413092 322 ntBASIC5.29□□□□□ -1.56
BCAS3Q9H6U6 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
BCAS3Q9H6U6 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC5.29□□□□□ -1.56
BCAS3Q9H6U6 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC5.29□□□□□ -1.56
BCAS3Q9H6U6 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC5.29□□□□□ -1.56
BCAS3Q9H6U6 REREP1Y-201ENST00000422655 198 ntBASIC5.29□□□□□ -1.56
BCAS3Q9H6U6 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC5.29□□□□□ -1.56
BCAS3Q9H6U6 RPL18P10-201ENST00000425606 538 ntBASIC5.29□□□□□ -1.56
BCAS3Q9H6U6 NPM1P34-201ENST00000428821 893 ntBASIC5.29□□□□□ -1.56
BCAS3Q9H6U6 REREP2Y-201ENST00000439103 200 ntBASIC5.29□□□□□ -1.56
BCAS3Q9H6U6 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC5.29□□□□□ -1.56
BCAS3Q9H6U6 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
BCAS3Q9H6U6 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC5.29□□□□□ -1.56
BCAS3Q9H6U6 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC5.29□□□□□ -1.56
BCAS3Q9H6U6 NDUFA5P7-201ENST00000452914 242 ntBASIC5.29□□□□□ -1.56
BCAS3Q9H6U6 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC5.29□□□□□ -1.56
BCAS3Q9H6U6 AC090602.1-201ENST00000469695 252 ntBASIC5.29□□□□□ -1.56
BCAS3Q9H6U6 RPL7AP10-201ENST00000481016 791 ntBASIC5.29□□□□□ -1.56
BCAS3Q9H6U6 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
BCAS3Q9H6U6 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC5.29□□□□□ -1.56
BCAS3Q9H6U6 HMGN1P13-201ENST00000505795 138 ntBASIC5.29□□□□□ -1.56
BCAS3Q9H6U6 RNU6-1281P-201ENST00000516223 105 ntBASIC5.29□□□□□ -1.56
BCAS3Q9H6U6 RNU1-6P-201ENST00000516290 144 ntBASIC5.29□□□□□ -1.56
BCAS3Q9H6U6 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC5.29□□□□□ -1.56
BCAS3Q9H6U6 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC5.29□□□□□ -1.56
BCAS3Q9H6U6 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC5.29□□□□□ -1.56
BCAS3Q9H6U6 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC5.29□□□□□ -1.56
BCAS3Q9H6U6 LSM3P2-201ENST00000551246 273 ntBASIC5.29□□□□□ -1.56
BCAS3Q9H6U6 AL389895.1-201ENST00000554127 252 ntBASIC5.29□□□□□ -1.56
BCAS3Q9H6U6 AC010928.3-201ENST00000587712 541 ntBASIC5.29□□□□□ -1.56
BCAS3Q9H6U6 AC022916.3-201ENST00000592961 742 ntBASIC5.29□□□□□ -1.56
BCAS3Q9H6U6 AL162413.1-201ENST00000603198 110 ntBASIC5.29□□□□□ -1.56
BCAS3Q9H6U6 AC012507.3-201ENST00000603556 477 ntBASIC5.29□□□□□ -1.56
BCAS3Q9H6U6 AC110994.2-201ENST00000635481 492 ntBASIC5.29□□□□□ -1.56
BCAS3Q9H6U6 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
BCAS3Q9H6U6 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
BCAS3Q9H6U6 AC022031.1-201ENST00000585985 2593 ntBASIC5.29□□□□□ -1.56
BCAS3Q9H6U6 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
BCAS3Q9H6U6 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
BCAS3Q9H6U6 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.29□□□□□ -1.56
BCAS3Q9H6U6 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.29□□□□□ -1.56
BCAS3Q9H6U6 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
BCAS3Q9H6U6 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
BCAS3Q9H6U6 CASC19-204ENST00000641001 2055 ntBASIC5.28□□□□□ -1.56
BCAS3Q9H6U6 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.28□□□□□ -1.56
BCAS3Q9H6U6 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
BCAS3Q9H6U6 SALL4P2-201ENST00000423288 2910 ntBASIC5.28□□□□□ -1.56
BCAS3Q9H6U6 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC5.28□□□□□ -1.56
BCAS3Q9H6U6 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 118.6 ms