Protein–RNA interactions for Protein: Q9C0J9

BHLHE41, Class E basic helix-loop-helix protein 41, humanhuman

Predicted RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BHLHE41Q9C0J9 AL670379.10-201ENST00000604330 253 ntBASIC5.51□□□□□ -1.53
BHLHE41Q9C0J9 AL670379.12-201ENST00000605291 253 ntBASIC5.51□□□□□ -1.53
BHLHE41Q9C0J9 AC010680.4-201ENST00000605334 543 ntBASIC5.51□□□□□ -1.53
BHLHE41Q9C0J9 AL670379.9-201ENST00000605428 253 ntBASIC5.51□□□□□ -1.53
BHLHE41Q9C0J9 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.51□□□□□ -1.53
BHLHE41Q9C0J9 AC011373.1-201ENST00000607270 237 ntBASIC5.51□□□□□ -1.53
BHLHE41Q9C0J9 AC012409.4-201ENST00000612923 249 ntBASIC5.51□□□□□ -1.53
BHLHE41Q9C0J9 AC123768.4-201ENST00000616244 701 ntBASIC5.51□□□□□ -1.53
BHLHE41Q9C0J9 AL136228.1-201ENST00000622221 319 ntBASIC5.51□□□□□ -1.53
BHLHE41Q9C0J9 AL357559.1-201ENST00000622228 274 ntBASIC5.51□□□□□ -1.53
BHLHE41Q9C0J9 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.51□□□□□ -1.53
BHLHE41Q9C0J9 AC022418.1-201ENST00000624118 445 ntBASIC5.51□□□□□ -1.53
BHLHE41Q9C0J9 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.51□□□□□ -1.53
BHLHE41Q9C0J9 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.51□□□□□ -1.53
BHLHE41Q9C0J9 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.51□□□□□ -1.53
BHLHE41Q9C0J9 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC5.51□□□□□ -1.53
BHLHE41Q9C0J9 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
BHLHE41Q9C0J9 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
BHLHE41Q9C0J9 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
BHLHE41Q9C0J9 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC5.51□□□□□ -1.53
BHLHE41Q9C0J9 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.51□□□□□ -1.53
BHLHE41Q9C0J9 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
BHLHE41Q9C0J9 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
BHLHE41Q9C0J9 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
BHLHE41Q9C0J9 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC5.51□□□□□ -1.53
BHLHE41Q9C0J9 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
BHLHE41Q9C0J9 AP004607.3-201ENST00000530354 3915 ntBASIC5.51□□□□□ -1.53
BHLHE41Q9C0J9 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
BHLHE41Q9C0J9 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.5□□□□□ -1.53
BHLHE41Q9C0J9 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.5□□□□□ -1.53
BHLHE41Q9C0J9 AC114774.1-201ENST00000507410 1770 ntBASIC5.5□□□□□ -1.53
BHLHE41Q9C0J9 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
BHLHE41Q9C0J9 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
BHLHE41Q9C0J9 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC5.5□□□□□ -1.53
BHLHE41Q9C0J9 RNA5SP433-201ENST00000364491 114 ntBASIC5.5□□□□□ -1.53
BHLHE41Q9C0J9 RNU4-2-201ENST00000365668 141 ntBASIC5.5□□□□□ -1.53
BHLHE41Q9C0J9 RNU1-136P-201ENST00000384181 164 ntBASIC5.5□□□□□ -1.53
BHLHE41Q9C0J9 SNORA24.1-201ENST00000384401 135 ntBASIC5.5□□□□□ -1.53
BHLHE41Q9C0J9 Y_RNA.576-201ENST00000384781 102 ntBASIC5.5□□□□□ -1.53
BHLHE41Q9C0J9 MIR568-201ENST00000385036 95 ntBASIC5.5□□□□□ -1.53
BHLHE41Q9C0J9 AL139397.2-201ENST00000404529 772 ntBASIC5.5□□□□□ -1.53
BHLHE41Q9C0J9 RNU6-954P-201ENST00000411355 107 ntBASIC5.5□□□□□ -1.53
BHLHE41Q9C0J9 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC5.5□□□□□ -1.53
BHLHE41Q9C0J9 ACTR3BP6-201ENST00000422332 1241 ntBASIC5.5□□□□□ -1.53
BHLHE41Q9C0J9 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC5.5□□□□□ -1.53
BHLHE41Q9C0J9 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.5□□□□□ -1.53
BHLHE41Q9C0J9 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
BHLHE41Q9C0J9 AL035666.1-201ENST00000446195 348 ntBASIC5.5□□□□□ -1.53
BHLHE41Q9C0J9 DHFRP3-201ENST00000455595 559 ntBASIC5.5□□□□□ -1.53
BHLHE41Q9C0J9 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.5□□□□□ -1.53
BHLHE41Q9C0J9 AC006967.1-201ENST00000467608 589 ntBASIC5.5□□□□□ -1.53
BHLHE41Q9C0J9 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.5□□□□□ -1.53
BHLHE41Q9C0J9 RFPL4AP5-201ENST00000514977 504 ntBASIC5.5□□□□□ -1.53
BHLHE41Q9C0J9 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC5.5□□□□□ -1.53
BHLHE41Q9C0J9 MTCO2P24-201ENST00000515611 426 ntBASIC5.5□□□□□ -1.53
BHLHE41Q9C0J9 RNU6-64P-201ENST00000517119 105 ntBASIC5.5□□□□□ -1.53
BHLHE41Q9C0J9 AC060775.1-201ENST00000518241 520 ntBASIC5.5□□□□□ -1.53
BHLHE41Q9C0J9 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC5.5□□□□□ -1.53
BHLHE41Q9C0J9 IGLVIV-53-201ENST00000520107 367 ntBASIC5.5□□□□□ -1.53
BHLHE41Q9C0J9 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC5.5□□□□□ -1.53
BHLHE41Q9C0J9 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.5□□□□□ -1.53
BHLHE41Q9C0J9 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC5.5□□□□□ -1.53
BHLHE41Q9C0J9 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC5.5□□□□□ -1.53
BHLHE41Q9C0J9 AC008269.2-201ENST00000561915 1105 ntBASIC5.5□□□□□ -1.53
BHLHE41Q9C0J9 AC002310.3-201ENST00000569728 723 ntBASIC5.5□□□□□ -1.53
BHLHE41Q9C0J9 AC245014.3-201ENST00000618589 347 ntBASIC5.5□□□□□ -1.53
BHLHE41Q9C0J9 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC5.5□□□□□ -1.53
BHLHE41Q9C0J9 AC074140.1-201ENST00000621617 208 ntBASIC5.5□□□□□ -1.53
BHLHE41Q9C0J9 AC007792.1-201ENST00000623023 402 ntBASIC5.5□□□□□ -1.53
BHLHE41Q9C0J9 AL353662.3-201ENST00000625131 237 ntBASIC5.5□□□□□ -1.53
BHLHE41Q9C0J9 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC5.5□□□□□ -1.53
BHLHE41Q9C0J9 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
BHLHE41Q9C0J9 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
BHLHE41Q9C0J9 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
BHLHE41Q9C0J9 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.5□□□□□ -1.53
BHLHE41Q9C0J9 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
BHLHE41Q9C0J9 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
BHLHE41Q9C0J9 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
BHLHE41Q9C0J9 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
BHLHE41Q9C0J9 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
BHLHE41Q9C0J9 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.5□□□□□ -1.53
BHLHE41Q9C0J9 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
BHLHE41Q9C0J9 AL034546.1-201ENST00000623740 3693 ntBASIC5.5□□□□□ -1.53
BHLHE41Q9C0J9 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
BHLHE41Q9C0J9 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
BHLHE41Q9C0J9 PARP4P2-201ENST00000446672 3326 ntBASIC5.49□□□□□ -1.53
BHLHE41Q9C0J9 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.49□□□□□ -1.53
BHLHE41Q9C0J9 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
BHLHE41Q9C0J9 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
BHLHE41Q9C0J9 AC010329.2-201ENST00000595195 2737 ntBASIC5.49□□□□□ -1.53
BHLHE41Q9C0J9 ZNF734P-201ENST00000419494 1534 ntBASIC5.49□□□□□ -1.53
BHLHE41Q9C0J9 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.49□□□□□ -1.53
BHLHE41Q9C0J9 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
BHLHE41Q9C0J9 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
BHLHE41Q9C0J9 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
BHLHE41Q9C0J9 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
BHLHE41Q9C0J9 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
BHLHE41Q9C0J9 RNA5SP453-201ENST00000362503 119 ntBASIC5.49□□□□□ -1.53
BHLHE41Q9C0J9 Y_RNA.149-201ENST00000363558 117 ntBASIC5.49□□□□□ -1.53
BHLHE41Q9C0J9 Y_RNA.158-201ENST00000363651 101 ntBASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms