Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
RTFDC1Q9BY42 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
RTFDC1Q9BY42 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
RTFDC1Q9BY42 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC5.13□□□□□ -1.59
RTFDC1Q9BY42 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
RTFDC1Q9BY42 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
RTFDC1Q9BY42 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.13□□□□□ -1.59
RTFDC1Q9BY42 AP002907.1-201ENST00000606361 1430 ntBASIC5.13□□□□□ -1.59
RTFDC1Q9BY42 KPNA2P2-201ENST00000419546 1489 ntBASIC5.13□□□□□ -1.59
RTFDC1Q9BY42 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RTFDC1Q9BY42 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RTFDC1Q9BY42 MTCO1P24-201ENST00000515438 1558 ntBASIC5.12□□□□□ -1.59
RTFDC1Q9BY42 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC5.12□□□□□ -1.59
RTFDC1Q9BY42 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC5.12□□□□□ -1.59
RTFDC1Q9BY42 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.12□□□□□ -1.59
RTFDC1Q9BY42 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC5.12□□□□□ -1.59
RTFDC1Q9BY42 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
RTFDC1Q9BY42 FAM91A3P-201ENST00000456826 2544 ntBASIC5.12□□□□□ -1.59
RTFDC1Q9BY42 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
RTFDC1Q9BY42 Y_RNA.560-201ENST00000384689 102 ntBASIC5.12□□□□□ -1.59
RTFDC1Q9BY42 MIR200C-201ENST00000384980 68 ntBASIC5.12□□□□□ -1.59
RTFDC1Q9BY42 SLC9B1P2-201ENST00000398120 1184 ntBASIC5.12□□□□□ -1.59
RTFDC1Q9BY42 SNORA11.1-201ENST00000408133 129 ntBASIC5.12□□□□□ -1.59
RTFDC1Q9BY42 MIR1271-201ENST00000408537 86 ntBASIC5.12□□□□□ -1.59
RTFDC1Q9BY42 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC5.12□□□□□ -1.59
RTFDC1Q9BY42 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC5.12□□□□□ -1.59
RTFDC1Q9BY42 AC012065.2-201ENST00000421295 375 ntBASIC5.12□□□□□ -1.59
RTFDC1Q9BY42 GOT2P5-201ENST00000433995 546 ntBASIC5.12□□□□□ -1.59
RTFDC1Q9BY42 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC5.12□□□□□ -1.59
RTFDC1Q9BY42 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC5.12□□□□□ -1.59
RTFDC1Q9BY42 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC5.12□□□□□ -1.59
RTFDC1Q9BY42 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC5.12□□□□□ -1.59
RTFDC1Q9BY42 PPIAP3-201ENST00000450588 505 ntBASIC5.12□□□□□ -1.59
RTFDC1Q9BY42 MEMO1P3-201ENST00000459811 302 ntBASIC5.12□□□□□ -1.59
RTFDC1Q9BY42 RPL37P6-202ENST00000464216 403 ntBASIC5.12□□□□□ -1.59
RTFDC1Q9BY42 PLGLA-201ENST00000465668 449 ntBASIC5.12□□□□□ -1.59
RTFDC1Q9BY42 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RTFDC1Q9BY42 ARL4AP1-201ENST00000503220 705 ntBASIC5.12□□□□□ -1.59
RTFDC1Q9BY42 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC5.12□□□□□ -1.59
RTFDC1Q9BY42 AC022861.1-201ENST00000522981 663 ntBASIC5.12□□□□□ -1.59
RTFDC1Q9BY42 AC092851.1-201ENST00000535964 478 ntBASIC5.12□□□□□ -1.59
RTFDC1Q9BY42 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC5.12□□□□□ -1.59
RTFDC1Q9BY42 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC5.12□□□□□ -1.59
RTFDC1Q9BY42 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC5.12□□□□□ -1.59
RTFDC1Q9BY42 LLPHP1-201ENST00000603571 367 ntBASIC5.12□□□□□ -1.59
RTFDC1Q9BY42 AC093783.1-201ENST00000612976 329 ntBASIC5.12□□□□□ -1.59
RTFDC1Q9BY42 MIR7844-201ENST00000616161 122 ntBASIC5.12□□□□□ -1.59
RTFDC1Q9BY42 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RTFDC1Q9BY42 MIR6500-201ENST00000622700 86 ntBASIC5.12□□□□□ -1.59
RTFDC1Q9BY42 AC000123.2-201ENST00000623124 461 ntBASIC5.12□□□□□ -1.59
RTFDC1Q9BY42 AC006927.3-201ENST00000638789 384 ntBASIC5.12□□□□□ -1.59
RTFDC1Q9BY42 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
RTFDC1Q9BY42 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RTFDC1Q9BY42 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.12□□□□□ -1.59
RTFDC1Q9BY42 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RTFDC1Q9BY42 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RTFDC1Q9BY42 HSP90AA5P-201ENST00000438353 2192 ntBASIC5.12□□□□□ -1.59
RTFDC1Q9BY42 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
RTFDC1Q9BY42 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
RTFDC1Q9BY42 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
RTFDC1Q9BY42 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RTFDC1Q9BY42 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RTFDC1Q9BY42 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.11□□□□□ -1.59
RTFDC1Q9BY42 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
RTFDC1Q9BY42 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.11□□□□□ -1.59
RTFDC1Q9BY42 AC016588.2-201ENST00000632484 3021 ntBASIC5.11□□□□□ -1.59
RTFDC1Q9BY42 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC5.11□□□□□ -1.59
RTFDC1Q9BY42 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
RTFDC1Q9BY42 AC008079.2-201ENST00000623543 20396 ntBASIC5.11□□□□□ -1.59
RTFDC1Q9BY42 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RTFDC1Q9BY42 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
RTFDC1Q9BY42 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC5.11□□□□□ -1.59
RTFDC1Q9BY42 RNA5SP124-201ENST00000362739 110 ntBASIC5.11□□□□□ -1.59
RTFDC1Q9BY42 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
RTFDC1Q9BY42 RNU6-723P-201ENST00000383973 107 ntBASIC5.11□□□□□ -1.59
RTFDC1Q9BY42 SNORD116-9-201ENST00000384000 95 ntBASIC5.11□□□□□ -1.59
RTFDC1Q9BY42 RNU6-213P-201ENST00000384051 104 ntBASIC5.11□□□□□ -1.59
RTFDC1Q9BY42 SNORD116-3-201ENST00000384287 95 ntBASIC5.11□□□□□ -1.59
RTFDC1Q9BY42 SNORD116-7-201ENST00000384404 95 ntBASIC5.11□□□□□ -1.59
RTFDC1Q9BY42 SNORD116-5-201ENST00000384462 95 ntBASIC5.11□□□□□ -1.59
RTFDC1Q9BY42 RNA5SP372-201ENST00000390836 115 ntBASIC5.11□□□□□ -1.59
RTFDC1Q9BY42 AL121972.1-201ENST00000402023 252 ntBASIC5.11□□□□□ -1.59
RTFDC1Q9BY42 MIR1911-201ENST00000410783 80 ntBASIC5.11□□□□□ -1.59
RTFDC1Q9BY42 RNU6-920P-201ENST00000410926 92 ntBASIC5.11□□□□□ -1.59
RTFDC1Q9BY42 MTCO2P5-201ENST00000422621 426 ntBASIC5.11□□□□□ -1.59
RTFDC1Q9BY42 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC5.11□□□□□ -1.59
RTFDC1Q9BY42 ELOCP8-201ENST00000439309 332 ntBASIC5.11□□□□□ -1.59
RTFDC1Q9BY42 MTND1P30-201ENST00000441241 901 ntBASIC5.11□□□□□ -1.59
RTFDC1Q9BY42 ELOCP15-201ENST00000442090 332 ntBASIC5.11□□□□□ -1.59
RTFDC1Q9BY42 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC5.11□□□□□ -1.59
RTFDC1Q9BY42 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC5.11□□□□□ -1.59
RTFDC1Q9BY42 PABPC1P3-201ENST00000469174 459 ntBASIC5.11□□□□□ -1.59
RTFDC1Q9BY42 AC104164.2-201ENST00000496953 495 ntBASIC5.11□□□□□ -1.59
RTFDC1Q9BY42 TMEM251P1-201ENST00000503717 318 ntBASIC5.11□□□□□ -1.59
RTFDC1Q9BY42 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC5.11□□□□□ -1.59
RTFDC1Q9BY42 MTND5P4-201ENST00000514978 288 ntBASIC5.11□□□□□ -1.59
RTFDC1Q9BY42 TBCA-206ENST00000518338 551 ntTSL 2 BASIC5.11□□□□□ -1.59
RTFDC1Q9BY42 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC5.11□□□□□ -1.59
RTFDC1Q9BY42 AC106038.2-201ENST00000520706 568 ntBASIC5.11□□□□□ -1.59
RTFDC1Q9BY42 AC087276.1-201ENST00000529659 480 ntBASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms