Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
VPS50Q96JG6 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC4.46□□□□□ -1.7
VPS50Q96JG6 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC4.46□□□□□ -1.7
VPS50Q96JG6 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC4.46□□□□□ -1.7
VPS50Q96JG6 RPL23AP16-201ENST00000441715 421 ntBASIC4.46□□□□□ -1.7
VPS50Q96JG6 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.46□□□□□ -1.7
VPS50Q96JG6 CFTRP1-201ENST00000456646 183 ntBASIC4.46□□□□□ -1.7
VPS50Q96JG6 RPS29P33-201ENST00000456717 146 ntBASIC4.46□□□□□ -1.7
VPS50Q96JG6 RNU7-136P-201ENST00000458819 69 ntBASIC4.46□□□□□ -1.7
VPS50Q96JG6 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC4.46□□□□□ -1.7
VPS50Q96JG6 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC4.46□□□□□ -1.7
VPS50Q96JG6 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC4.46□□□□□ -1.7
VPS50Q96JG6 AC015795.1-201ENST00000513669 327 ntBASIC4.46□□□□□ -1.7
VPS50Q96JG6 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC4.46□□□□□ -1.7
VPS50Q96JG6 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.46□□□□□ -1.7
VPS50Q96JG6 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
VPS50Q96JG6 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
VPS50Q96JG6 FKBP1BP1-201ENST00000553366 325 ntBASIC4.46□□□□□ -1.7
VPS50Q96JG6 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC4.46□□□□□ -1.7
VPS50Q96JG6 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC4.46□□□□□ -1.7
VPS50Q96JG6 MIR5699-201ENST00000578903 90 ntBASIC4.46□□□□□ -1.7
VPS50Q96JG6 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC4.46□□□□□ -1.7
VPS50Q96JG6 AC087683.1-201ENST00000591187 441 ntBASIC4.46□□□□□ -1.7
VPS50Q96JG6 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
VPS50Q96JG6 AC073648.5-201ENST00000603502 305 ntBASIC4.46□□□□□ -1.7
VPS50Q96JG6 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.46□□□□□ -1.7
VPS50Q96JG6 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
VPS50Q96JG6 AL022401.1-201ENST00000619498 108 ntBASIC4.46□□□□□ -1.7
VPS50Q96JG6 LINC00561-201ENST00000565815 2738 ntBASIC4.46□□□□□ -1.7
VPS50Q96JG6 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.46□□□□□ -1.7
VPS50Q96JG6 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.46□□□□□ -1.7
VPS50Q96JG6 ZNF137P-201ENST00000456718 1920 ntBASIC4.46□□□□□ -1.7
VPS50Q96JG6 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
VPS50Q96JG6 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
VPS50Q96JG6 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.46□□□□□ -1.7
VPS50Q96JG6 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
VPS50Q96JG6 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.46□□□□□ -1.7
VPS50Q96JG6 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
VPS50Q96JG6 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
VPS50Q96JG6 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
VPS50Q96JG6 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.45□□□□□ -1.7
VPS50Q96JG6 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
VPS50Q96JG6 MTND4P4-201ENST00000439033 1366 ntBASIC4.45□□□□□ -1.7
VPS50Q96JG6 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
VPS50Q96JG6 AC125257.1-201ENST00000560400 2930 ntBASIC4.45□□□□□ -1.7
VPS50Q96JG6 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
VPS50Q96JG6 Y_RNA.97-201ENST00000363094 102 ntBASIC4.45□□□□□ -1.7
VPS50Q96JG6 SNORA51.6-201ENST00000384151 125 ntBASIC4.45□□□□□ -1.7
VPS50Q96JG6 MIR921-201ENST00000401133 56 ntBASIC4.45□□□□□ -1.7
VPS50Q96JG6 ARL4AP5-201ENST00000404372 599 ntBASIC4.45□□□□□ -1.7
VPS50Q96JG6 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.45□□□□□ -1.7
VPS50Q96JG6 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.45□□□□□ -1.7
VPS50Q96JG6 RNU2-16P-201ENST00000410712 136 ntBASIC4.45□□□□□ -1.7
VPS50Q96JG6 RN7SKP106-201ENST00000410832 272 ntBASIC4.45□□□□□ -1.7
VPS50Q96JG6 AF274854.1-201ENST00000413236 615 ntBASIC4.45□□□□□ -1.7
VPS50Q96JG6 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC4.45□□□□□ -1.7
VPS50Q96JG6 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC4.45□□□□□ -1.7
VPS50Q96JG6 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC4.45□□□□□ -1.7
VPS50Q96JG6 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
VPS50Q96JG6 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC4.45□□□□□ -1.7
VPS50Q96JG6 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC4.45□□□□□ -1.7
VPS50Q96JG6 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC4.45□□□□□ -1.7
VPS50Q96JG6 PRELID3BP10-201ENST00000431957 584 ntBASIC4.45□□□□□ -1.7
VPS50Q96JG6 LSM1P1-201ENST00000438629 273 ntBASIC4.45□□□□□ -1.7
VPS50Q96JG6 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC4.45□□□□□ -1.7
VPS50Q96JG6 CDC27P1-201ENST00000445384 715 ntBASIC4.45□□□□□ -1.7
VPS50Q96JG6 RNA5SP269-201ENST00000459032 137 ntBASIC4.45□□□□□ -1.7
VPS50Q96JG6 OR9M1P-201ENST00000459641 921 ntBASIC4.45□□□□□ -1.7
VPS50Q96JG6 AC091564.1-201ENST00000464563 479 ntBASIC4.45□□□□□ -1.7
VPS50Q96JG6 AC090142.1-201ENST00000465776 462 ntBASIC4.45□□□□□ -1.7
VPS50Q96JG6 AL136126.1-201ENST00000473603 402 ntBASIC4.45□□□□□ -1.7
VPS50Q96JG6 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC4.45□□□□□ -1.7
VPS50Q96JG6 AC011825.1-201ENST00000484967 388 ntBASIC4.45□□□□□ -1.7
VPS50Q96JG6 AC005726.1-201ENST00000494679 427 ntBASIC4.45□□□□□ -1.7
VPS50Q96JG6 HMGB1P21-201ENST00000502313 581 ntBASIC4.45□□□□□ -1.7
VPS50Q96JG6 AK3P4-201ENST00000504283 583 ntBASIC4.45□□□□□ -1.7
VPS50Q96JG6 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC4.45□□□□□ -1.7
VPS50Q96JG6 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC4.45□□□□□ -1.7
VPS50Q96JG6 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.45□□□□□ -1.7
VPS50Q96JG6 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC4.45□□□□□ -1.7
VPS50Q96JG6 IGHV3-32-201ENST00000519182 355 ntBASIC4.45□□□□□ -1.7
VPS50Q96JG6 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.45□□□□□ -1.7
VPS50Q96JG6 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
VPS50Q96JG6 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC4.45□□□□□ -1.7
VPS50Q96JG6 AC008127.2-201ENST00000549925 1075 ntBASIC4.45□□□□□ -1.7
VPS50Q96JG6 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC4.45□□□□□ -1.7
VPS50Q96JG6 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC4.45□□□□□ -1.7
VPS50Q96JG6 AC091489.2-201ENST00000566263 604 ntBASIC4.45□□□□□ -1.7
VPS50Q96JG6 AC015912.2-201ENST00000571053 181 ntBASIC4.45□□□□□ -1.7
VPS50Q96JG6 RN7SL652P-201ENST00000577769 300 ntBASIC4.45□□□□□ -1.7
VPS50Q96JG6 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC4.45□□□□□ -1.7
VPS50Q96JG6 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC4.45□□□□□ -1.7
VPS50Q96JG6 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.45□□□□□ -1.7
VPS50Q96JG6 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.45□□□□□ -1.7
VPS50Q96JG6 AC027807.2-201ENST00000616099 408 ntBASIC4.45□□□□□ -1.7
VPS50Q96JG6 AL357080.1-201ENST00000617394 239 ntBASIC4.45□□□□□ -1.7
VPS50Q96JG6 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC4.45□□□□□ -1.7
VPS50Q96JG6 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
VPS50Q96JG6 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
VPS50Q96JG6 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 122.8 ms