Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.29□□□□□ -1.88
ECHDC3Q96DC8 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC3.29□□□□□ -1.88
ECHDC3Q96DC8 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC3.29□□□□□ -1.88
ECHDC3Q96DC8 HESX1-202ENST00000473921 757 ntTSL 5 BASIC3.29□□□□□ -1.88
ECHDC3Q96DC8 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.29□□□□□ -1.88
ECHDC3Q96DC8 RAD51AP1P1-201ENST00000484195 1001 ntBASIC3.29□□□□□ -1.88
ECHDC3Q96DC8 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.29□□□□□ -1.88
ECHDC3Q96DC8 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.29□□□□□ -1.88
ECHDC3Q96DC8 PHBP14-201ENST00000512887 367 ntBASIC3.29□□□□□ -1.88
ECHDC3Q96DC8 RPL12P22-201ENST00000519073 490 ntBASIC3.29□□□□□ -1.88
ECHDC3Q96DC8 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.29□□□□□ -1.88
ECHDC3Q96DC8 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC3.29□□□□□ -1.88
ECHDC3Q96DC8 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC3.29□□□□□ -1.88
ECHDC3Q96DC8 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC3.29□□□□□ -1.88
ECHDC3Q96DC8 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC3.29□□□□□ -1.88
ECHDC3Q96DC8 MIR3690-201ENST00000580266 75 ntBASIC3.29□□□□□ -1.88
ECHDC3Q96DC8 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.29□□□□□ -1.88
ECHDC3Q96DC8 ZNF415P1-201ENST00000582279 1166 ntBASIC3.29□□□□□ -1.88
ECHDC3Q96DC8 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC3.29□□□□□ -1.88
ECHDC3Q96DC8 BNIP3P22-201ENST00000593399 556 ntBASIC3.29□□□□□ -1.88
ECHDC3Q96DC8 AL606834.2-201ENST00000602954 668 ntBASIC3.29□□□□□ -1.88
ECHDC3Q96DC8 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.29□□□□□ -1.88
ECHDC3Q96DC8 AC079880.2-201ENST00000603790 1213 ntBASIC3.29□□□□□ -1.88
ECHDC3Q96DC8 AL162713.1-201ENST00000604480 262 ntBASIC3.29□□□□□ -1.88
ECHDC3Q96DC8 AL365503.1-201ENST00000605247 905 ntBASIC3.29□□□□□ -1.88
ECHDC3Q96DC8 AC005156.1-201ENST00000613371 573 ntBASIC3.29□□□□□ -1.88
ECHDC3Q96DC8 AL157817.1-201ENST00000614264 790 ntBASIC3.29□□□□□ -1.88
ECHDC3Q96DC8 AC008121.2-201ENST00000614647 523 ntBASIC3.29□□□□□ -1.88
ECHDC3Q96DC8 U73479.1-201ENST00000618062 168 ntBASIC3.29□□□□□ -1.88
ECHDC3Q96DC8 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC3.29□□□□□ -1.88
ECHDC3Q96DC8 AP003400.6-201ENST00000624698 740 ntBASIC3.29□□□□□ -1.88
ECHDC3Q96DC8 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
ECHDC3Q96DC8 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.29□□□□□ -1.88
ECHDC3Q96DC8 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
ECHDC3Q96DC8 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
ECHDC3Q96DC8 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.28□□□□□ -1.88
ECHDC3Q96DC8 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
ECHDC3Q96DC8 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.28□□□□□ -1.88
ECHDC3Q96DC8 OR52E6-202ENST00000379946 954 ntBASIC3.28□□□□□ -1.88
ECHDC3Q96DC8 AP002088.1-201ENST00000382740 395 ntBASIC3.28□□□□□ -1.88
ECHDC3Q96DC8 SNORA51.12-201ENST00000384448 134 ntBASIC3.28□□□□□ -1.88
ECHDC3Q96DC8 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
ECHDC3Q96DC8 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.28□□□□□ -1.88
ECHDC3Q96DC8 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
ECHDC3Q96DC8 UBE2V1P1-201ENST00000430836 445 ntBASIC3.28□□□□□ -1.88
ECHDC3Q96DC8 AL513175.1-201ENST00000431492 780 ntBASIC3.28□□□□□ -1.88
ECHDC3Q96DC8 AL353705.1-201ENST00000433468 480 ntBASIC3.28□□□□□ -1.88
ECHDC3Q96DC8 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.28□□□□□ -1.88
ECHDC3Q96DC8 NF1P3-201ENST00000457709 450 ntBASIC3.28□□□□□ -1.88
ECHDC3Q96DC8 AC092754.2-201ENST00000463506 460 ntBASIC3.28□□□□□ -1.88
ECHDC3Q96DC8 AC108729.2-201ENST00000476543 840 ntBASIC3.28□□□□□ -1.88
ECHDC3Q96DC8 RPL23AP44-201ENST00000482216 473 ntBASIC3.28□□□□□ -1.88
ECHDC3Q96DC8 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC3.28□□□□□ -1.88
ECHDC3Q96DC8 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
ECHDC3Q96DC8 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC3.28□□□□□ -1.88
ECHDC3Q96DC8 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC3.28□□□□□ -1.88
ECHDC3Q96DC8 AP001636.2-201ENST00000525517 696 ntBASIC3.28□□□□□ -1.88
ECHDC3Q96DC8 MTCYBP41-201ENST00000528913 1123 ntBASIC3.28□□□□□ -1.88
ECHDC3Q96DC8 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.28□□□□□ -1.88
ECHDC3Q96DC8 AL731537.2-201ENST00000561565 951 ntBASIC3.28□□□□□ -1.88
ECHDC3Q96DC8 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.28□□□□□ -1.88
ECHDC3Q96DC8 MIR5680-201ENST00000577577 84 ntBASIC3.28□□□□□ -1.88
ECHDC3Q96DC8 AC006023.2-201ENST00000609916 167 ntBASIC3.28□□□□□ -1.88
ECHDC3Q96DC8 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.28□□□□□ -1.88
ECHDC3Q96DC8 SEC63P2-201ENST00000503863 1939 ntBASIC3.28□□□□□ -1.88
ECHDC3Q96DC8 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
ECHDC3Q96DC8 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.28□□□□□ -1.88
ECHDC3Q96DC8 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.28□□□□□ -1.89
ECHDC3Q96DC8 AC073346.2-201ENST00000624724 2058 ntBASIC3.28□□□□□ -1.89
ECHDC3Q96DC8 AC005183.1-201ENST00000603687 1979 ntBASIC3.27□□□□□ -1.89
ECHDC3Q96DC8 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
ECHDC3Q96DC8 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
ECHDC3Q96DC8 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
ECHDC3Q96DC8 RNA5SP295-201ENST00000362655 121 ntBASIC3.27□□□□□ -1.89
ECHDC3Q96DC8 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
ECHDC3Q96DC8 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
ECHDC3Q96DC8 RNU6-796P-201ENST00000391086 107 ntBASIC3.27□□□□□ -1.89
ECHDC3Q96DC8 SNORA48.8-201ENST00000391324 134 ntBASIC3.27□□□□□ -1.89
ECHDC3Q96DC8 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
ECHDC3Q96DC8 AL138880.1-201ENST00000405824 642 ntBASIC3.27□□□□□ -1.89
ECHDC3Q96DC8 RNU4-47P-201ENST00000410876 114 ntBASIC3.27□□□□□ -1.89
ECHDC3Q96DC8 KRR1P1-201ENST00000419430 803 ntBASIC3.27□□□□□ -1.89
ECHDC3Q96DC8 VDAC1P3-201ENST00000434069 851 ntBASIC3.27□□□□□ -1.89
ECHDC3Q96DC8 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
ECHDC3Q96DC8 AC091862.1-201ENST00000438016 1100 ntBASIC3.27□□□□□ -1.89
ECHDC3Q96DC8 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.27□□□□□ -1.89
ECHDC3Q96DC8 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC3.27□□□□□ -1.89
ECHDC3Q96DC8 AP002884.2-201ENST00000471647 395 ntBASIC3.27□□□□□ -1.89
ECHDC3Q96DC8 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
ECHDC3Q96DC8 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.27□□□□□ -1.89
ECHDC3Q96DC8 RN7SKP289-201ENST00000517244 295 ntBASIC3.27□□□□□ -1.89
ECHDC3Q96DC8 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC3.27□□□□□ -1.89
ECHDC3Q96DC8 NDUFB9P3-201ENST00000521269 501 ntBASIC3.27□□□□□ -1.89
ECHDC3Q96DC8 IGHV3-76-201ENST00000522465 295 ntBASIC3.27□□□□□ -1.89
ECHDC3Q96DC8 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.27□□□□□ -1.89
ECHDC3Q96DC8 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC3.27□□□□□ -1.89
ECHDC3Q96DC8 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.27□□□□□ -1.89
ECHDC3Q96DC8 SERPINE4P-201ENST00000554978 281 ntBASIC3.27□□□□□ -1.89
ECHDC3Q96DC8 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.27□□□□□ -1.89
ECHDC3Q96DC8 MIR2682-201ENST00000580305 110 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 140.7 ms