Protein–RNA interactions for Protein: Q8WV44

TRIM41, E3 ubiquitin-protein ligase TRIM41, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41Q8WV44 RNU2-3P-201ENST00000410144 191 ntBASIC9.25□□□□□ -0.93
TRIM41Q8WV44 PRELID3BP11-201ENST00000414230 479 ntBASIC9.25□□□□□ -0.93
TRIM41Q8WV44 AC091390.3-201ENST00000426478 338 ntBASIC9.25□□□□□ -0.93
TRIM41Q8WV44 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC9.25□□□□□ -0.93
TRIM41Q8WV44 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC9.25□□□□□ -0.93
TRIM41Q8WV44 AC079781.2-201ENST00000446424 169 ntBASIC9.25□□□□□ -0.93
TRIM41Q8WV44 AC002381.1-201ENST00000447049 280 ntBASIC9.25□□□□□ -0.93
TRIM41Q8WV44 AC073415.1-201ENST00000449240 153 ntBASIC9.25□□□□□ -0.93
TRIM41Q8WV44 AL356010.1-201ENST00000456364 102 ntBASIC9.25□□□□□ -0.93
TRIM41Q8WV44 CEACAMP4-201ENST00000457676 421 ntBASIC9.25□□□□□ -0.93
TRIM41Q8WV44 SNORD125-201ENST00000459538 96 ntBASIC9.25□□□□□ -0.93
TRIM41Q8WV44 RPL23AP12-201ENST00000467573 473 ntBASIC9.25□□□□□ -0.93
TRIM41Q8WV44 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC9.25□□□□□ -0.93
TRIM41Q8WV44 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC9.25□□□□□ -0.93
TRIM41Q8WV44 Y_RNA.665-201ENST00000516177 98 ntBASIC9.25□□□□□ -0.93
TRIM41Q8WV44 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC9.25□□□□□ -0.93
TRIM41Q8WV44 COX6B1P6-201ENST00000522347 255 ntBASIC9.25□□□□□ -0.93
TRIM41Q8WV44 ARL6IP1P3-201ENST00000524544 560 ntBASIC9.25□□□□□ -0.93
TRIM41Q8WV44 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC9.25□□□□□ -0.93
TRIM41Q8WV44 AP002404.1-201ENST00000532005 451 ntBASIC9.25□□□□□ -0.93
TRIM41Q8WV44 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC9.25□□□□□ -0.93
TRIM41Q8WV44 AC017100.2-201ENST00000584628 355 ntBASIC9.25□□□□□ -0.93
TRIM41Q8WV44 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC9.25□□□□□ -0.93
TRIM41Q8WV44 AC083806.3-201ENST00000614016 455 ntBASIC9.25□□□□□ -0.93
TRIM41Q8WV44 AC034229.5-201ENST00000624258 185 ntBASIC9.25□□□□□ -0.93
TRIM41Q8WV44 Z69720.2-201ENST00000624755 279 ntBASIC9.25□□□□□ -0.93
TRIM41Q8WV44 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC9.25□□□□□ -0.93
TRIM41Q8WV44 ACTR3BP5-201ENST00000448440 1479 ntBASIC9.25□□□□□ -0.93
TRIM41Q8WV44 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
TRIM41Q8WV44 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC9.25□□□□□ -0.93
TRIM41Q8WV44 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
TRIM41Q8WV44 VPS35P1-201ENST00000563400 1518 ntBASIC9.25□□□□□ -0.93
TRIM41Q8WV44 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
TRIM41Q8WV44 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC9.24□□□□□ -0.93
TRIM41Q8WV44 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
TRIM41Q8WV44 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
TRIM41Q8WV44 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
TRIM41Q8WV44 GNAS-202ENST00000306090 477 ntTSL 5 BASIC9.24□□□□□ -0.93
TRIM41Q8WV44 RNU6-1013P-201ENST00000384180 107 ntBASIC9.24□□□□□ -0.93
TRIM41Q8WV44 Y_RNA.557-201ENST00000384680 107 ntBASIC9.24□□□□□ -0.93
TRIM41Q8WV44 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC9.24□□□□□ -0.93
TRIM41Q8WV44 DHFRP6-201ENST00000401776 268 ntBASIC9.24□□□□□ -0.93
TRIM41Q8WV44 AL359634.1-202ENST00000404721 284 ntBASIC9.24□□□□□ -0.93
TRIM41Q8WV44 AC233981.1-201ENST00000423224 461 ntBASIC9.24□□□□□ -0.93
TRIM41Q8WV44 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
TRIM41Q8WV44 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC9.24□□□□□ -0.93
TRIM41Q8WV44 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC9.24□□□□□ -0.93
TRIM41Q8WV44 RPL30P15-201ENST00000457129 321 ntBASIC9.24□□□□□ -0.93
TRIM41Q8WV44 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC9.24□□□□□ -0.93
TRIM41Q8WV44 AC009902.1-201ENST00000519351 183 ntBASIC9.24□□□□□ -0.93
TRIM41Q8WV44 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC9.24□□□□□ -0.93
TRIM41Q8WV44 AL389895.1-201ENST00000554127 252 ntBASIC9.24□□□□□ -0.93
TRIM41Q8WV44 EDDM3DP-201ENST00000554692 434 ntBASIC9.24□□□□□ -0.93
TRIM41Q8WV44 OR4T1P-201ENST00000554933 911 ntBASIC9.24□□□□□ -0.93
TRIM41Q8WV44 MEG8-218ENST00000556720 456 ntTSL 3 BASIC9.24□□□□□ -0.93
TRIM41Q8WV44 MYL12BP1-201ENST00000569826 507 ntBASIC9.24□□□□□ -0.93
TRIM41Q8WV44 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC9.24□□□□□ -0.93
TRIM41Q8WV44 VN1R85P-201ENST00000601587 426 ntBASIC9.24□□□□□ -0.93
TRIM41Q8WV44 AL391813.2-201ENST00000609113 322 ntBASIC9.24□□□□□ -0.93
TRIM41Q8WV44 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC9.24□□□□□ -0.93
TRIM41Q8WV44 LINC01362-202ENST00000452901 1712 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
TRIM41Q8WV44 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
TRIM41Q8WV44 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
TRIM41Q8WV44 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
TRIM41Q8WV44 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
TRIM41Q8WV44 AC006206.1-201ENST00000544842 3387 ntBASIC9.24□□□□□ -0.93
TRIM41Q8WV44 USP8-204ENST00000425032 3559 ntTSL 2 BASIC9.23□□□□□ -0.93
TRIM41Q8WV44 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
TRIM41Q8WV44 AC140479.2-201ENST00000421567 3130 ntBASIC9.23□□□□□ -0.93
TRIM41Q8WV44 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
TRIM41Q8WV44 AC110716.2-201ENST00000563865 3945 ntBASIC9.23□□□□□ -0.93
TRIM41Q8WV44 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
TRIM41Q8WV44 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.93
TRIM41Q8WV44 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC9.23□□□□□ -0.93
TRIM41Q8WV44 RNY4P16-201ENST00000364768 94 ntBASIC9.23□□□□□ -0.93
TRIM41Q8WV44 Y_RNA.301-201ENST00000364990 103 ntBASIC9.23□□□□□ -0.93
TRIM41Q8WV44 RNU4-66P-201ENST00000365199 138 ntBASIC9.23□□□□□ -0.93
TRIM41Q8WV44 RNA5SP339-201ENST00000390987 122 ntBASIC9.23□□□□□ -0.93
TRIM41Q8WV44 AL133388.1-201ENST00000404509 287 ntBASIC9.23□□□□□ -0.93
TRIM41Q8WV44 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC9.23□□□□□ -0.93
TRIM41Q8WV44 DDX3P2-201ENST00000446138 111 ntBASIC9.23□□□□□ -0.93
TRIM41Q8WV44 APOOP2-201ENST00000461561 539 ntBASIC9.23□□□□□ -0.93
TRIM41Q8WV44 RPL31P50-201ENST00000471002 296 ntBASIC9.23□□□□□ -0.93
TRIM41Q8WV44 AC098583.1-201ENST00000480875 255 ntBASIC9.23□□□□□ -0.93
TRIM41Q8WV44 SUMO2P4-201ENST00000504193 276 ntBASIC9.23□□□□□ -0.93
TRIM41Q8WV44 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC9.23□□□□□ -0.93
TRIM41Q8WV44 RNU6-202P-201ENST00000515998 96 ntBASIC9.23□□□□□ -0.93
TRIM41Q8WV44 AC104986.1-201ENST00000517978 436 ntBASIC9.23□□□□□ -0.93
TRIM41Q8WV44 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC9.23□□□□□ -0.93
TRIM41Q8WV44 AP005902.1-201ENST00000521358 186 ntBASIC9.23□□□□□ -0.93
TRIM41Q8WV44 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC9.23□□□□□ -0.93
TRIM41Q8WV44 AC107934.1-201ENST00000522215 217 ntBASIC9.23□□□□□ -0.93
TRIM41Q8WV44 COX6CP8-201ENST00000522620 226 ntBASIC9.23□□□□□ -0.93
TRIM41Q8WV44 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC9.23□□□□□ -0.93
TRIM41Q8WV44 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC9.23□□□□□ -0.93
TRIM41Q8WV44 AC093227.2-201ENST00000589357 285 ntBASIC9.23□□□□□ -0.93
TRIM41Q8WV44 AC011487.3-201ENST00000593607 453 ntBASIC9.23□□□□□ -0.93
TRIM41Q8WV44 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC9.23□□□□□ -0.93
TRIM41Q8WV44 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC9.23□□□□□ -0.93
TRIM41Q8WV44 AC130324.3-201ENST00000614165 542 ntBASIC9.23□□□□□ -0.93
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms