Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC2.94□□□□□ -1.94
SHROOM3Q8TF72 AC090525.1-201ENST00000479116 478 ntBASIC2.94□□□□□ -1.94
SHROOM3Q8TF72 AC011037.1-201ENST00000483964 558 ntBASIC2.94□□□□□ -1.94
SHROOM3Q8TF72 POU5F1P7-201ENST00000508759 541 ntBASIC2.94□□□□□ -1.94
SHROOM3Q8TF72 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC2.94□□□□□ -1.94
SHROOM3Q8TF72 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC2.94□□□□□ -1.94
SHROOM3Q8TF72 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC2.94□□□□□ -1.94
SHROOM3Q8TF72 OR4V1P-201ENST00000525394 1140 ntBASIC2.94□□□□□ -1.94
SHROOM3Q8TF72 SNRPGP1-201ENST00000553864 222 ntBASIC2.94□□□□□ -1.94
SHROOM3Q8TF72 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC2.94□□□□□ -1.94
SHROOM3Q8TF72 AC012119.1-201ENST00000603184 222 ntBASIC2.94□□□□□ -1.94
SHROOM3Q8TF72 AC064859.1-201ENST00000624741 174 ntBASIC2.94□□□□□ -1.94
SHROOM3Q8TF72 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC2.94□□□□□ -1.94
SHROOM3Q8TF72 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC2.94□□□□□ -1.94
SHROOM3Q8TF72 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC2.94□□□□□ -1.94
SHROOM3Q8TF72 MTND5P23-201ENST00000430812 1655 ntBASIC2.93□□□□□ -1.94
SHROOM3Q8TF72 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
SHROOM3Q8TF72 RNU6-891P-201ENST00000384280 111 ntBASIC2.93□□□□□ -1.94
SHROOM3Q8TF72 RNU6-1263P-201ENST00000384601 106 ntBASIC2.93□□□□□ -1.94
SHROOM3Q8TF72 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC2.93□□□□□ -1.94
SHROOM3Q8TF72 AC108938.1-201ENST00000451204 136 ntBASIC2.93□□□□□ -1.94
SHROOM3Q8TF72 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC2.93□□□□□ -1.94
SHROOM3Q8TF72 SETP12-201ENST00000514068 805 ntBASIC2.93□□□□□ -1.94
SHROOM3Q8TF72 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC2.93□□□□□ -1.94
SHROOM3Q8TF72 MTCYBP19-201ENST00000517463 1124 ntBASIC2.93□□□□□ -1.94
SHROOM3Q8TF72 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC2.93□□□□□ -1.94
SHROOM3Q8TF72 FAM60DP-201ENST00000524174 632 ntBASIC2.93□□□□□ -1.94
SHROOM3Q8TF72 AP002404.1-201ENST00000532005 451 ntBASIC2.93□□□□□ -1.94
SHROOM3Q8TF72 AC107918.3-201ENST00000533272 382 ntBASIC2.93□□□□□ -1.94
SHROOM3Q8TF72 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC2.93□□□□□ -1.94
SHROOM3Q8TF72 AC022387.2-201ENST00000604050 448 ntBASIC2.93□□□□□ -1.94
SHROOM3Q8TF72 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC2.93□□□□□ -1.94
SHROOM3Q8TF72 AL163152.1-201ENST00000642001 374 ntBASIC2.93□□□□□ -1.94
SHROOM3Q8TF72 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC2.93□□□□□ -1.94
SHROOM3Q8TF72 MAPK6PS3-201ENST00000403865 2162 ntBASIC2.93□□□□□ -1.94
SHROOM3Q8TF72 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
SHROOM3Q8TF72 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
SHROOM3Q8TF72 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC2.93□□□□□ -1.94
SHROOM3Q8TF72 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.93□□□□□ -1.94
SHROOM3Q8TF72 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC2.92□□□□□ -1.94
SHROOM3Q8TF72 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC2.92□□□□□ -1.94
SHROOM3Q8TF72 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
SHROOM3Q8TF72 AC022018.1-201ENST00000430685 241 ntBASIC2.92□□□□□ -1.94
SHROOM3Q8TF72 BTBD7P2-201ENST00000441962 620 ntBASIC2.92□□□□□ -1.94
SHROOM3Q8TF72 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.92□□□□□ -1.94
SHROOM3Q8TF72 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC2.92□□□□□ -1.94
SHROOM3Q8TF72 AC239798.3-201ENST00000454459 408 ntBASIC2.92□□□□□ -1.94
SHROOM3Q8TF72 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC2.92□□□□□ -1.94
SHROOM3Q8TF72 AC109329.2-201ENST00000519658 482 ntBASIC2.92□□□□□ -1.94
SHROOM3Q8TF72 AC091515.1-201ENST00000548110 679 ntBASIC2.92□□□□□ -1.94
SHROOM3Q8TF72 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC2.92□□□□□ -1.94
SHROOM3Q8TF72 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.92□□□□□ -1.94
SHROOM3Q8TF72 AL731537.2-201ENST00000561565 951 ntBASIC2.92□□□□□ -1.94
SHROOM3Q8TF72 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC2.92□□□□□ -1.94
SHROOM3Q8TF72 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC2.92□□□□□ -1.94
SHROOM3Q8TF72 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
SHROOM3Q8TF72 LINC00216-201ENST00000623548 1126 ntBASIC2.92□□□□□ -1.94
SHROOM3Q8TF72 AP002967.1-201ENST00000624203 539 ntBASIC2.92□□□□□ -1.94
SHROOM3Q8TF72 AC119674.1-220ENST00000641502 1048 ntBASIC2.92□□□□□ -1.94
SHROOM3Q8TF72 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
SHROOM3Q8TF72 AC046144.1-201ENST00000478559 1853 ntBASIC2.92□□□□□ -1.94
SHROOM3Q8TF72 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.92□□□□□ -1.94
SHROOM3Q8TF72 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC2.92□□□□□ -1.94
SHROOM3Q8TF72 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
SHROOM3Q8TF72 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC2.92□□□□□ -1.94
SHROOM3Q8TF72 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC2.92□□□□□ -1.94
SHROOM3Q8TF72 AC106901.1-201ENST00000425086 698 ntBASIC2.92□□□□□ -1.94
SHROOM3Q8TF72 MTCO1P52-201ENST00000433928 531 ntBASIC2.92□□□□□ -1.94
SHROOM3Q8TF72 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC2.92□□□□□ -1.94
SHROOM3Q8TF72 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC2.92□□□□□ -1.94
SHROOM3Q8TF72 AC003982.1-202ENST00000469928 248 ntBASIC2.92□□□□□ -1.94
SHROOM3Q8TF72 DYNLL1P6-201ENST00000503440 264 ntBASIC2.92□□□□□ -1.94
SHROOM3Q8TF72 ANXA2P1-201ENST00000505539 926 ntBASIC2.92□□□□□ -1.94
SHROOM3Q8TF72 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC2.92□□□□□ -1.94
SHROOM3Q8TF72 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC2.92□□□□□ -1.94
SHROOM3Q8TF72 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC2.92□□□□□ -1.94
SHROOM3Q8TF72 AC025754.2-201ENST00000606491 432 ntBASIC2.92□□□□□ -1.94
SHROOM3Q8TF72 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.92□□□□□ -1.94
SHROOM3Q8TF72 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.91□□□□□ -1.94
SHROOM3Q8TF72 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
SHROOM3Q8TF72 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
SHROOM3Q8TF72 AL672167.1-206ENST00000356293 943 ntBASIC2.91□□□□□ -1.94
SHROOM3Q8TF72 AC073508.1-201ENST00000428866 656 ntBASIC2.91□□□□□ -1.94
SHROOM3Q8TF72 Z85994.2-201ENST00000434327 452 ntBASIC2.91□□□□□ -1.94
SHROOM3Q8TF72 AC128713.1-201ENST00000471495 306 ntBASIC2.91□□□□□ -1.94
SHROOM3Q8TF72 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC2.91□□□□□ -1.94
SHROOM3Q8TF72 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.91□□□□□ -1.94
SHROOM3Q8TF72 AC117522.3-201ENST00000507974 584 ntBASIC2.91□□□□□ -1.94
SHROOM3Q8TF72 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC2.91□□□□□ -1.94
SHROOM3Q8TF72 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC2.91□□□□□ -1.94
SHROOM3Q8TF72 AL389895.1-201ENST00000554127 252 ntBASIC2.91□□□□□ -1.94
SHROOM3Q8TF72 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.91□□□□□ -1.94
SHROOM3Q8TF72 AC100814.1-201ENST00000606963 623 ntBASIC2.91□□□□□ -1.94
SHROOM3Q8TF72 AL118556.2-201ENST00000614375 824 ntBASIC2.91□□□□□ -1.94
SHROOM3Q8TF72 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.91□□□□□ -1.94
SHROOM3Q8TF72 CFTRP2-201ENST00000634304 199 ntBASIC2.91□□□□□ -1.94
SHROOM3Q8TF72 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
SHROOM3Q8TF72 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
SHROOM3Q8TF72 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
SHROOM3Q8TF72 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC2.91□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms