Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
PRPF39Q86UA1 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.09□□□□□ -1.75
PRPF39Q86UA1 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
PRPF39Q86UA1 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
PRPF39Q86UA1 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
PRPF39Q86UA1 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
PRPF39Q86UA1 RNU6-216P-201ENST00000363282 104 ntBASIC4.09□□□□□ -1.75
PRPF39Q86UA1 SNORA62.3-201ENST00000365110 153 ntBASIC4.09□□□□□ -1.75
PRPF39Q86UA1 RNA5SP235-201ENST00000365411 114 ntBASIC4.09□□□□□ -1.75
PRPF39Q86UA1 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
PRPF39Q86UA1 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.75
PRPF39Q86UA1 RNU6-1122P-201ENST00000384449 107 ntBASIC4.09□□□□□ -1.75
PRPF39Q86UA1 RNU4-6P-201ENST00000410804 122 ntBASIC4.09□□□□□ -1.75
PRPF39Q86UA1 MTCO3P12-201ENST00000416718 547 ntBASIC4.09□□□□□ -1.75
PRPF39Q86UA1 RPS29P7-201ENST00000439662 171 ntBASIC4.09□□□□□ -1.75
PRPF39Q86UA1 AC146944.2-203ENST00000502493 354 ntBASIC4.09□□□□□ -1.75
PRPF39Q86UA1 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.09□□□□□ -1.75
PRPF39Q86UA1 AC139495.1-202ENST00000513164 354 ntBASIC4.09□□□□□ -1.75
PRPF39Q86UA1 MIR2114-201ENST00000516645 80 ntBASIC4.09□□□□□ -1.75
PRPF39Q86UA1 RNA5SP143-201ENST00000516936 115 ntBASIC4.09□□□□□ -1.75
PRPF39Q86UA1 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC4.09□□□□□ -1.75
PRPF39Q86UA1 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC4.09□□□□□ -1.75
PRPF39Q86UA1 AP001636.2-201ENST00000525517 696 ntBASIC4.09□□□□□ -1.75
PRPF39Q86UA1 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC4.09□□□□□ -1.75
PRPF39Q86UA1 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.09□□□□□ -1.75
PRPF39Q86UA1 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.09□□□□□ -1.75
PRPF39Q86UA1 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.09□□□□□ -1.75
PRPF39Q86UA1 GNRHR2P1-201ENST00000555315 631 ntBASIC4.09□□□□□ -1.75
PRPF39Q86UA1 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC4.09□□□□□ -1.75
PRPF39Q86UA1 LARP7P2-201ENST00000575306 125 ntBASIC4.09□□□□□ -1.75
PRPF39Q86UA1 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC4.09□□□□□ -1.75
PRPF39Q86UA1 BNIP3P33-201ENST00000598912 569 ntBASIC4.09□□□□□ -1.75
PRPF39Q86UA1 AC245389.1-201ENST00000605141 529 ntBASIC4.09□□□□□ -1.75
PRPF39Q86UA1 AC128687.1-201ENST00000605304 619 ntBASIC4.09□□□□□ -1.75
PRPF39Q86UA1 MIR6868-201ENST00000611215 58 ntBASIC4.09□□□□□ -1.75
PRPF39Q86UA1 AL392048.1-201ENST00000613946 534 ntBASIC4.09□□□□□ -1.75
PRPF39Q86UA1 uc_338.32-201ENST00000615087 172 ntBASIC4.09□□□□□ -1.75
PRPF39Q86UA1 AC018755.4-201ENST00000619715 454 ntBASIC4.09□□□□□ -1.75
PRPF39Q86UA1 AC090772.4-201ENST00000623599 362 ntBASIC4.09□□□□□ -1.75
PRPF39Q86UA1 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.09□□□□□ -1.75
PRPF39Q86UA1 OR4G3P-201ENST00000633500 913 ntBASIC4.09□□□□□ -1.75
PRPF39Q86UA1 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC4.09□□□□□ -1.75
PRPF39Q86UA1 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
PRPF39Q86UA1 AC099786.3-201ENST00000565735 1410 ntBASIC4.09□□□□□ -1.75
PRPF39Q86UA1 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
PRPF39Q86UA1 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.09□□□□□ -1.76
PRPF39Q86UA1 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PRPF39Q86UA1 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
PRPF39Q86UA1 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
PRPF39Q86UA1 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PRPF39Q86UA1 AC007685.1-201ENST00000329806 452 ntBASIC4.08□□□□□ -1.76
PRPF39Q86UA1 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
PRPF39Q86UA1 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
PRPF39Q86UA1 RNU6-584P-201ENST00000410350 95 ntBASIC4.08□□□□□ -1.76
PRPF39Q86UA1 AC012065.2-201ENST00000421295 375 ntBASIC4.08□□□□□ -1.76
PRPF39Q86UA1 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.08□□□□□ -1.76
PRPF39Q86UA1 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
PRPF39Q86UA1 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.08□□□□□ -1.76
PRPF39Q86UA1 MTCO2P25-201ENST00000447065 681 ntBASIC4.08□□□□□ -1.76
PRPF39Q86UA1 RPL39P6-201ENST00000448289 150 ntBASIC4.08□□□□□ -1.76
PRPF39Q86UA1 AL009048.1-201ENST00000450437 298 ntBASIC4.08□□□□□ -1.76
PRPF39Q86UA1 RPS11P1-201ENST00000451072 473 ntBASIC4.08□□□□□ -1.76
PRPF39Q86UA1 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
PRPF39Q86UA1 RPL9P32-201ENST00000464118 620 ntBASIC4.08□□□□□ -1.76
PRPF39Q86UA1 AC087312.1-201ENST00000471411 480 ntBASIC4.08□□□□□ -1.76
PRPF39Q86UA1 TMED11P-201ENST00000479478 690 ntBASIC4.08□□□□□ -1.76
PRPF39Q86UA1 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.08□□□□□ -1.76
PRPF39Q86UA1 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC4.08□□□□□ -1.76
PRPF39Q86UA1 RPL23AP55-201ENST00000498163 452 ntBASIC4.08□□□□□ -1.76
PRPF39Q86UA1 GTF2IP9-201ENST00000502460 301 ntBASIC4.08□□□□□ -1.76
PRPF39Q86UA1 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
PRPF39Q86UA1 AC010342.1-201ENST00000514047 877 ntBASIC4.08□□□□□ -1.76
PRPF39Q86UA1 RNU6-1073P-201ENST00000517182 106 ntBASIC4.08□□□□□ -1.76
PRPF39Q86UA1 RNU1-45P-201ENST00000517191 141 ntBASIC4.08□□□□□ -1.76
PRPF39Q86UA1 SLC2A13P1-201ENST00000531560 322 ntBASIC4.08□□□□□ -1.76
PRPF39Q86UA1 AL132857.1-201ENST00000555180 708 ntBASIC4.08□□□□□ -1.76
PRPF39Q86UA1 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.08□□□□□ -1.76
PRPF39Q86UA1 AL133457.1-201ENST00000564251 987 ntBASIC4.08□□□□□ -1.76
PRPF39Q86UA1 AC023813.2-201ENST00000564321 469 ntBASIC4.08□□□□□ -1.76
PRPF39Q86UA1 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC4.08□□□□□ -1.76
PRPF39Q86UA1 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC4.08□□□□□ -1.76
PRPF39Q86UA1 AC120057.2-201ENST00000571520 271 ntBASIC4.08□□□□□ -1.76
PRPF39Q86UA1 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC4.08□□□□□ -1.76
PRPF39Q86UA1 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC4.08□□□□□ -1.76
PRPF39Q86UA1 BNIP3P26-201ENST00000600827 554 ntBASIC4.08□□□□□ -1.76
PRPF39Q86UA1 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC4.08□□□□□ -1.76
PRPF39Q86UA1 AC007687.1-201ENST00000602704 304 ntBASIC4.08□□□□□ -1.76
PRPF39Q86UA1 AC103881.1-201ENST00000603476 538 ntBASIC4.08□□□□□ -1.76
PRPF39Q86UA1 AC011816.2-201ENST00000607089 556 ntBASIC4.08□□□□□ -1.76
PRPF39Q86UA1 AP003392.5-201ENST00000607857 415 ntBASIC4.08□□□□□ -1.76
PRPF39Q86UA1 AC006213.4-201ENST00000616184 634 ntBASIC4.08□□□□□ -1.76
PRPF39Q86UA1 AC092650.2-201ENST00000619984 902 ntBASIC4.08□□□□□ -1.76
PRPF39Q86UA1 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
PRPF39Q86UA1 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.08□□□□□ -1.76
PRPF39Q86UA1 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.07□□□□□ -1.76
PRPF39Q86UA1 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
PRPF39Q86UA1 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
PRPF39Q86UA1 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC4.07□□□□□ -1.76
PRPF39Q86UA1 AP001350.1-201ENST00000601906 1524 ntBASIC4.07□□□□□ -1.76
PRPF39Q86UA1 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms