Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.6□□□□□ -1.83
NHLRC1Q6VVB1 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.6□□□□□ -1.83
NHLRC1Q6VVB1 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.6□□□□□ -1.83
NHLRC1Q6VVB1 AL049780.3-201ENST00000624612 1583 ntBASIC3.6□□□□□ -1.83
NHLRC1Q6VVB1 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
NHLRC1Q6VVB1 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.6□□□□□ -1.83
NHLRC1Q6VVB1 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
NHLRC1Q6VVB1 OR11H4-201ENST00000315409 1082 ntBASIC3.6□□□□□ -1.83
NHLRC1Q6VVB1 SNRPEP3-201ENST00000338402 276 ntBASIC3.6□□□□□ -1.83
NHLRC1Q6VVB1 Y_RNA.472-201ENST00000384322 102 ntBASIC3.6□□□□□ -1.83
NHLRC1Q6VVB1 RNU11-4P-201ENST00000391149 133 ntBASIC3.6□□□□□ -1.83
NHLRC1Q6VVB1 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
NHLRC1Q6VVB1 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.6□□□□□ -1.83
NHLRC1Q6VVB1 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC3.6□□□□□ -1.83
NHLRC1Q6VVB1 AC019178.2-201ENST00000423595 505 ntBASIC3.6□□□□□ -1.83
NHLRC1Q6VVB1 RPL23AP38-201ENST00000423801 469 ntBASIC3.6□□□□□ -1.83
NHLRC1Q6VVB1 ZDHHC20P2-201ENST00000424108 429 ntBASIC3.6□□□□□ -1.83
NHLRC1Q6VVB1 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC3.6□□□□□ -1.83
NHLRC1Q6VVB1 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC3.6□□□□□ -1.83
NHLRC1Q6VVB1 RPL7P28-201ENST00000437739 740 ntBASIC3.6□□□□□ -1.83
NHLRC1Q6VVB1 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC3.6□□□□□ -1.83
NHLRC1Q6VVB1 FABP3P2-201ENST00000453169 399 ntBASIC3.6□□□□□ -1.83
NHLRC1Q6VVB1 PTGES3P5-201ENST00000455109 434 ntBASIC3.6□□□□□ -1.83
NHLRC1Q6VVB1 RPS15AP17-201ENST00000470598 390 ntBASIC3.6□□□□□ -1.83
NHLRC1Q6VVB1 AC093278.1-201ENST00000494700 600 ntBASIC3.6□□□□□ -1.83
NHLRC1Q6VVB1 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
NHLRC1Q6VVB1 HMGB1P28-201ENST00000507778 552 ntBASIC3.6□□□□□ -1.83
NHLRC1Q6VVB1 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.6□□□□□ -1.83
NHLRC1Q6VVB1 RN7SKP122-201ENST00000515923 296 ntBASIC3.6□□□□□ -1.83
NHLRC1Q6VVB1 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
NHLRC1Q6VVB1 YPEL5P3-201ENST00000547227 352 ntBASIC3.6□□□□□ -1.83
NHLRC1Q6VVB1 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.6□□□□□ -1.83
NHLRC1Q6VVB1 MIR3690-201ENST00000580266 75 ntBASIC3.6□□□□□ -1.83
NHLRC1Q6VVB1 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC3.6□□□□□ -1.83
NHLRC1Q6VVB1 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.6□□□□□ -1.83
NHLRC1Q6VVB1 AL160237.3-201ENST00000604114 1013 ntBASIC3.6□□□□□ -1.83
NHLRC1Q6VVB1 AL157392.4-201ENST00000609756 345 ntBASIC3.6□□□□□ -1.83
NHLRC1Q6VVB1 AL355816.2-201ENST00000610049 647 ntBASIC3.6□□□□□ -1.83
NHLRC1Q6VVB1 MIR6867-201ENST00000610636 67 ntBASIC3.6□□□□□ -1.83
NHLRC1Q6VVB1 AC018755.4-201ENST00000619715 454 ntBASIC3.6□□□□□ -1.83
NHLRC1Q6VVB1 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.6□□□□□ -1.83
NHLRC1Q6VVB1 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.6□□□□□ -1.83
NHLRC1Q6VVB1 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.6□□□□□ -1.83
NHLRC1Q6VVB1 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
NHLRC1Q6VVB1 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
NHLRC1Q6VVB1 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.6□□□□□ -1.83
NHLRC1Q6VVB1 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.6□□□□□ -1.83
NHLRC1Q6VVB1 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
NHLRC1Q6VVB1 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
NHLRC1Q6VVB1 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.6□□□□□ -1.83
NHLRC1Q6VVB1 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.59□□□□□ -1.83
NHLRC1Q6VVB1 AL672296.1-201ENST00000427780 2158 ntBASIC3.59□□□□□ -1.83
NHLRC1Q6VVB1 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
NHLRC1Q6VVB1 AL079343.1-201ENST00000572358 1771 ntBASIC3.59□□□□□ -1.83
NHLRC1Q6VVB1 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
NHLRC1Q6VVB1 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
NHLRC1Q6VVB1 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.59□□□□□ -1.83
NHLRC1Q6VVB1 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
NHLRC1Q6VVB1 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
NHLRC1Q6VVB1 SNORA60-201ENST00000362396 134 ntBASIC3.59□□□□□ -1.83
NHLRC1Q6VVB1 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC3.59□□□□□ -1.83
NHLRC1Q6VVB1 SNORD3H-201ENST00000384486 214 ntBASIC3.59□□□□□ -1.83
NHLRC1Q6VVB1 U3.29-201ENST00000391296 212 ntBASIC3.59□□□□□ -1.83
NHLRC1Q6VVB1 RNA5SP129-201ENST00000410276 118 ntBASIC3.59□□□□□ -1.83
NHLRC1Q6VVB1 RNU6-712P-201ENST00000410558 100 ntBASIC3.59□□□□□ -1.83
NHLRC1Q6VVB1 HSPE1P12-201ENST00000412576 301 ntBASIC3.59□□□□□ -1.83
NHLRC1Q6VVB1 TIMM9P2-201ENST00000419324 266 ntBASIC3.59□□□□□ -1.83
NHLRC1Q6VVB1 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC3.59□□□□□ -1.83
NHLRC1Q6VVB1 AL513175.2-201ENST00000422071 443 ntBASIC3.59□□□□□ -1.83
NHLRC1Q6VVB1 AC092648.1-201ENST00000425870 423 ntBASIC3.59□□□□□ -1.83
NHLRC1Q6VVB1 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC3.59□□□□□ -1.83
NHLRC1Q6VVB1 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.59□□□□□ -1.83
NHLRC1Q6VVB1 MTND4LP10-201ENST00000435146 291 ntBASIC3.59□□□□□ -1.83
NHLRC1Q6VVB1 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
NHLRC1Q6VVB1 AC083863.1-201ENST00000438811 231 ntBASIC3.59□□□□□ -1.83
NHLRC1Q6VVB1 Z95327.1-201ENST00000446082 482 ntBASIC3.59□□□□□ -1.83
NHLRC1Q6VVB1 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC3.59□□□□□ -1.83
NHLRC1Q6VVB1 CEACAMP4-201ENST00000457676 421 ntBASIC3.59□□□□□ -1.83
NHLRC1Q6VVB1 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.59□□□□□ -1.83
NHLRC1Q6VVB1 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
NHLRC1Q6VVB1 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.59□□□□□ -1.83
NHLRC1Q6VVB1 RPL23AP55-201ENST00000498163 452 ntBASIC3.59□□□□□ -1.83
NHLRC1Q6VVB1 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC3.59□□□□□ -1.83
NHLRC1Q6VVB1 AC114322.1-201ENST00000506771 926 ntBASIC3.59□□□□□ -1.83
NHLRC1Q6VVB1 RNU6-27P-201ENST00000516146 107 ntBASIC3.59□□□□□ -1.83
NHLRC1Q6VVB1 RNA5SP468-201ENST00000516782 93 ntBASIC3.59□□□□□ -1.83
NHLRC1Q6VVB1 NARSP2-201ENST00000518524 679 ntBASIC3.59□□□□□ -1.83
NHLRC1Q6VVB1 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC3.59□□□□□ -1.83
NHLRC1Q6VVB1 AC092851.1-201ENST00000535964 478 ntBASIC3.59□□□□□ -1.83
NHLRC1Q6VVB1 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC3.59□□□□□ -1.83
NHLRC1Q6VVB1 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC3.59□□□□□ -1.83
NHLRC1Q6VVB1 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC3.59□□□□□ -1.83
NHLRC1Q6VVB1 OR4K7P-201ENST00000580232 945 ntBASIC3.59□□□□□ -1.83
NHLRC1Q6VVB1 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC3.59□□□□□ -1.83
NHLRC1Q6VVB1 AL590392.1-201ENST00000604960 446 ntBASIC3.59□□□□□ -1.83
NHLRC1Q6VVB1 ARF4P1-201ENST00000605447 541 ntBASIC3.59□□□□□ -1.83
NHLRC1Q6VVB1 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.59□□□□□ -1.83
NHLRC1Q6VVB1 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.59□□□□□ -1.83
NHLRC1Q6VVB1 AC069209.1-201ENST00000619282 651 ntBASIC3.59□□□□□ -1.83
NHLRC1Q6VVB1 MIR6830-201ENST00000636015 70 ntBASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms