Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 AC063923.1-201ENST00000478982 1619 ntBASIC3.84□□□□□ -1.79
CDC42BPAQ5VT25 AC010733.2-201ENST00000589496 5702 ntBASIC3.84□□□□□ -1.79
CDC42BPAQ5VT25 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
CDC42BPAQ5VT25 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC3.84□□□□□ -1.8
CDC42BPAQ5VT25 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.84□□□□□ -1.8
CDC42BPAQ5VT25 AL512633.1-201ENST00000399931 655 ntBASIC3.84□□□□□ -1.8
CDC42BPAQ5VT25 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.84□□□□□ -1.8
CDC42BPAQ5VT25 AL592437.1-201ENST00000443781 492 ntBASIC3.84□□□□□ -1.8
CDC42BPAQ5VT25 USP9YP5-201ENST00000511770 630 ntBASIC3.84□□□□□ -1.8
CDC42BPAQ5VT25 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC3.84□□□□□ -1.8
CDC42BPAQ5VT25 RN7SKP24-201ENST00000515888 284 ntBASIC3.84□□□□□ -1.8
CDC42BPAQ5VT25 MIR4524B-201ENST00000581569 115 ntBASIC3.84□□□□□ -1.8
CDC42BPAQ5VT25 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.84□□□□□ -1.8
CDC42BPAQ5VT25 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC3.84□□□□□ -1.8
CDC42BPAQ5VT25 AC009159.1-201ENST00000618386 642 ntBASIC3.84□□□□□ -1.8
CDC42BPAQ5VT25 GTF2H2B-203ENST00000508065 1432 ntBASIC3.84□□□□□ -1.8
CDC42BPAQ5VT25 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.8
CDC42BPAQ5VT25 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CDC42BPAQ5VT25 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.83□□□□□ -1.8
CDC42BPAQ5VT25 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.83□□□□□ -1.8
CDC42BPAQ5VT25 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CDC42BPAQ5VT25 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC3.83□□□□□ -1.8
CDC42BPAQ5VT25 AL590290.1-201ENST00000405336 380 ntBASIC3.83□□□□□ -1.8
CDC42BPAQ5VT25 MTCO3P31-201ENST00000405526 789 ntBASIC3.83□□□□□ -1.8
CDC42BPAQ5VT25 UBE2D3P1-201ENST00000436669 444 ntBASIC3.83□□□□□ -1.8
CDC42BPAQ5VT25 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.83□□□□□ -1.8
CDC42BPAQ5VT25 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.83□□□□□ -1.8
CDC42BPAQ5VT25 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.83□□□□□ -1.8
CDC42BPAQ5VT25 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CDC42BPAQ5VT25 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.83□□□□□ -1.8
CDC42BPAQ5VT25 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.83□□□□□ -1.8
CDC42BPAQ5VT25 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CDC42BPAQ5VT25 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
CDC42BPAQ5VT25 SNORD114-30-201ENST00000364448 72 ntBASIC3.82□□□□□ -1.8
CDC42BPAQ5VT25 AL356806.1-201ENST00000422524 916 ntBASIC3.82□□□□□ -1.8
CDC42BPAQ5VT25 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC3.82□□□□□ -1.8
CDC42BPAQ5VT25 AC008280.2-201ENST00000455473 307 ntBASIC3.82□□□□□ -1.8
CDC42BPAQ5VT25 AC021146.5-201ENST00000503544 545 ntBASIC3.82□□□□□ -1.8
CDC42BPAQ5VT25 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC3.82□□□□□ -1.8
CDC42BPAQ5VT25 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.82□□□□□ -1.8
CDC42BPAQ5VT25 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.82□□□□□ -1.8
CDC42BPAQ5VT25 CASC16-202ENST00000563844 610 ntTSL 3 BASIC3.82□□□□□ -1.8
CDC42BPAQ5VT25 AC009977.1-201ENST00000586015 570 ntBASIC3.82□□□□□ -1.8
CDC42BPAQ5VT25 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
CDC42BPAQ5VT25 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
CDC42BPAQ5VT25 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
CDC42BPAQ5VT25 RNU1-100P-201ENST00000365255 165 ntBASIC3.81□□□□□ -1.8
CDC42BPAQ5VT25 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC3.81□□□□□ -1.8
CDC42BPAQ5VT25 RPL23AP74-201ENST00000437246 471 ntBASIC3.81□□□□□ -1.8
CDC42BPAQ5VT25 RPL36AP51-201ENST00000487216 318 ntBASIC3.81□□□□□ -1.8
CDC42BPAQ5VT25 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.81□□□□□ -1.8
CDC42BPAQ5VT25 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.81□□□□□ -1.8
CDC42BPAQ5VT25 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.81□□□□□ -1.8
CDC42BPAQ5VT25 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CDC42BPAQ5VT25 AC004825.2-201ENST00000616634 455 ntBASIC3.81□□□□□ -1.8
CDC42BPAQ5VT25 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
CDC42BPAQ5VT25 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
CDC42BPAQ5VT25 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
CDC42BPAQ5VT25 AL590004.2-201ENST00000404787 371 ntBASIC3.81□□□□□ -1.8
CDC42BPAQ5VT25 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.81□□□□□ -1.8
CDC42BPAQ5VT25 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.81□□□□□ -1.8
CDC42BPAQ5VT25 RN7SL297P-201ENST00000483161 293 ntBASIC3.81□□□□□ -1.8
CDC42BPAQ5VT25 AC068305.1-201ENST00000497406 726 ntBASIC3.81□□□□□ -1.8
CDC42BPAQ5VT25 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CDC42BPAQ5VT25 AC034244.2-201ENST00000514668 858 ntBASIC3.81□□□□□ -1.8
CDC42BPAQ5VT25 ERP27-202ENST00000540097 993 ntTSL 2 BASIC3.81□□□□□ -1.8
CDC42BPAQ5VT25 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.81□□□□□ -1.8
CDC42BPAQ5VT25 MIR4648-201ENST00000580107 72 ntBASIC3.81□□□□□ -1.8
CDC42BPAQ5VT25 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
CDC42BPAQ5VT25 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
CDC42BPAQ5VT25 RNU6-618P-201ENST00000363518 112 ntBASIC3.8□□□□□ -1.8
CDC42BPAQ5VT25 AC069218.2-201ENST00000411665 344 ntBASIC3.8□□□□□ -1.8
CDC42BPAQ5VT25 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CDC42BPAQ5VT25 AL137014.1-201ENST00000420490 1226 ntBASIC3.8□□□□□ -1.8
CDC42BPAQ5VT25 HMGN2P3-201ENST00000433603 273 ntBASIC3.8□□□□□ -1.8
CDC42BPAQ5VT25 HMGN2P5-201ENST00000436882 273 ntBASIC3.8□□□□□ -1.8
CDC42BPAQ5VT25 AL662791.1-201ENST00000441992 928 ntBASIC3.8□□□□□ -1.8
CDC42BPAQ5VT25 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC3.8□□□□□ -1.8
CDC42BPAQ5VT25 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC3.8□□□□□ -1.8
CDC42BPAQ5VT25 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC3.8□□□□□ -1.8
CDC42BPAQ5VT25 SNORA31.1-201ENST00000515993 133 ntBASIC3.8□□□□□ -1.8
CDC42BPAQ5VT25 SNORA31.5-201ENST00000516190 133 ntBASIC3.8□□□□□ -1.8
CDC42BPAQ5VT25 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC3.8□□□□□ -1.8
CDC42BPAQ5VT25 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC3.8□□□□□ -1.8
CDC42BPAQ5VT25 AC007938.3-201ENST00000604965 623 ntBASIC3.8□□□□□ -1.8
CDC42BPAQ5VT25 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
CDC42BPAQ5VT25 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.8□□□□□ -1.8
CDC42BPAQ5VT25 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CDC42BPAQ5VT25 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
CDC42BPAQ5VT25 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CDC42BPAQ5VT25 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CDC42BPAQ5VT25 RNU4-53P-201ENST00000410828 140 ntBASIC3.79□□□□□ -1.8
CDC42BPAQ5VT25 Z98742.3-201ENST00000418637 326 ntBASIC3.79□□□□□ -1.8
CDC42BPAQ5VT25 EIF2S2P4-201ENST00000461070 984 ntBASIC3.79□□□□□ -1.8
CDC42BPAQ5VT25 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.79□□□□□ -1.8
CDC42BPAQ5VT25 NPM1P35-201ENST00000533043 868 ntBASIC3.79□□□□□ -1.8
CDC42BPAQ5VT25 AC098826.3-201ENST00000603823 466 ntBASIC3.79□□□□□ -1.8
CDC42BPAQ5VT25 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC3.79□□□□□ -1.8
CDC42BPAQ5VT25 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CDC42BPAQ5VT25 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms