Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
SLC44A4Q53GD3 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
SLC44A4Q53GD3 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.75□□□□□ -1.65
SLC44A4Q53GD3 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
SLC44A4Q53GD3 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.75□□□□□ -1.65
SLC44A4Q53GD3 AL122126.1-201ENST00000546905 1318 ntBASIC4.75□□□□□ -1.65
SLC44A4Q53GD3 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
SLC44A4Q53GD3 AL031985.3-201ENST00000565390 2449 ntBASIC4.75□□□□□ -1.65
SLC44A4Q53GD3 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
SLC44A4Q53GD3 MIR448-201ENST00000362131 111 ntBASIC4.75□□□□□ -1.65
SLC44A4Q53GD3 Y_RNA.41-201ENST00000362646 102 ntBASIC4.75□□□□□ -1.65
SLC44A4Q53GD3 Y_RNA.516-201ENST00000384541 124 ntBASIC4.75□□□□□ -1.65
SLC44A4Q53GD3 MIR708-201ENST00000390708 88 ntBASIC4.75□□□□□ -1.65
SLC44A4Q53GD3 AL590762.2-201ENST00000395798 571 ntBASIC4.75□□□□□ -1.65
SLC44A4Q53GD3 RPL32P23-201ENST00000397237 405 ntBASIC4.75□□□□□ -1.65
SLC44A4Q53GD3 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC4.75□□□□□ -1.65
SLC44A4Q53GD3 RNU2-16P-201ENST00000410712 136 ntBASIC4.75□□□□□ -1.65
SLC44A4Q53GD3 AL133384.1-201ENST00000412744 351 ntBASIC4.75□□□□□ -1.65
SLC44A4Q53GD3 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC4.75□□□□□ -1.65
SLC44A4Q53GD3 RPL30P16-201ENST00000419341 429 ntBASIC4.75□□□□□ -1.65
SLC44A4Q53GD3 AC011998.1-201ENST00000433403 117 ntBASIC4.75□□□□□ -1.65
SLC44A4Q53GD3 MTATP6P23-201ENST00000440153 476 ntBASIC4.75□□□□□ -1.65
SLC44A4Q53GD3 AL353572.1-201ENST00000442490 417 ntBASIC4.75□□□□□ -1.65
SLC44A4Q53GD3 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC4.75□□□□□ -1.65
SLC44A4Q53GD3 AC104073.1-201ENST00000451988 151 ntBASIC4.75□□□□□ -1.65
SLC44A4Q53GD3 MTCYBP1-201ENST00000454315 1119 ntBASIC4.75□□□□□ -1.65
SLC44A4Q53GD3 SNRPGP9-201ENST00000456025 225 ntBASIC4.75□□□□□ -1.65
SLC44A4Q53GD3 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
SLC44A4Q53GD3 RNU7-136P-201ENST00000458819 69 ntBASIC4.75□□□□□ -1.65
SLC44A4Q53GD3 RPL7P19-201ENST00000469948 618 ntBASIC4.75□□□□□ -1.65
SLC44A4Q53GD3 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.75□□□□□ -1.65
SLC44A4Q53GD3 AC105137.1-201ENST00000484355 562 ntBASIC4.75□□□□□ -1.65
SLC44A4Q53GD3 AC091167.1-201ENST00000492017 396 ntBASIC4.75□□□□□ -1.65
SLC44A4Q53GD3 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.75□□□□□ -1.65
SLC44A4Q53GD3 CBX3P3-201ENST00000508108 532 ntBASIC4.75□□□□□ -1.65
SLC44A4Q53GD3 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.75□□□□□ -1.65
SLC44A4Q53GD3 VWA8P1-201ENST00000510889 176 ntBASIC4.75□□□□□ -1.65
SLC44A4Q53GD3 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC4.75□□□□□ -1.65
SLC44A4Q53GD3 MRPL49P2-201ENST00000521066 465 ntBASIC4.75□□□□□ -1.65
SLC44A4Q53GD3 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC4.75□□□□□ -1.65
SLC44A4Q53GD3 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC4.75□□□□□ -1.65
SLC44A4Q53GD3 AP002963.1-201ENST00000530590 184 ntBASIC4.75□□□□□ -1.65
SLC44A4Q53GD3 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
SLC44A4Q53GD3 AP000873.5-201ENST00000533906 236 ntBASIC4.75□□□□□ -1.65
SLC44A4Q53GD3 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.75□□□□□ -1.65
SLC44A4Q53GD3 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC4.75□□□□□ -1.65
SLC44A4Q53GD3 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC4.75□□□□□ -1.65
SLC44A4Q53GD3 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.75□□□□□ -1.65
SLC44A4Q53GD3 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC4.75□□□□□ -1.65
SLC44A4Q53GD3 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC4.75□□□□□ -1.65
SLC44A4Q53GD3 AC141257.3-201ENST00000572906 215 ntBASIC4.75□□□□□ -1.65
SLC44A4Q53GD3 AC136618.2-201ENST00000575091 400 ntBASIC4.75□□□□□ -1.65
SLC44A4Q53GD3 AC079089.3-201ENST00000603094 673 ntBASIC4.75□□□□□ -1.65
SLC44A4Q53GD3 MIR92B-201ENST00000607575 96 ntBASIC4.75□□□□□ -1.65
SLC44A4Q53GD3 AC103710.4-201ENST00000609301 899 ntBASIC4.75□□□□□ -1.65
SLC44A4Q53GD3 AC087241.4-201ENST00000612441 480 ntBASIC4.75□□□□□ -1.65
SLC44A4Q53GD3 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
SLC44A4Q53GD3 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
SLC44A4Q53GD3 AC055839.1-201ENST00000634467 498 ntBASIC4.75□□□□□ -1.65
SLC44A4Q53GD3 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
SLC44A4Q53GD3 AL672167.1-203ENST00000641299 2975 ntBASIC4.75□□□□□ -1.65
SLC44A4Q53GD3 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
SLC44A4Q53GD3 ELL2P4-201ENST00000446870 1376 ntBASIC4.75□□□□□ -1.65
SLC44A4Q53GD3 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
SLC44A4Q53GD3 AC107068.1-201ENST00000563286 4218 ntBASIC4.75□□□□□ -1.65
SLC44A4Q53GD3 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
SLC44A4Q53GD3 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
SLC44A4Q53GD3 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
SLC44A4Q53GD3 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
SLC44A4Q53GD3 AL451142.2-201ENST00000429076 2090 ntBASIC4.74□□□□□ -1.65
SLC44A4Q53GD3 AC007529.1-201ENST00000418574 2178 ntBASIC4.74□□□□□ -1.65
SLC44A4Q53GD3 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
SLC44A4Q53GD3 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.74□□□□□ -1.65
SLC44A4Q53GD3 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.74□□□□□ -1.65
SLC44A4Q53GD3 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SLC44A4Q53GD3 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
SLC44A4Q53GD3 FCF1P9-201ENST00000412546 282 ntBASIC4.74□□□□□ -1.65
SLC44A4Q53GD3 AC004987.3-201ENST00000413879 771 ntBASIC4.74□□□□□ -1.65
SLC44A4Q53GD3 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.74□□□□□ -1.65
SLC44A4Q53GD3 EIF4EP1-201ENST00000422311 642 ntBASIC4.74□□□□□ -1.65
SLC44A4Q53GD3 RGS17P1-201ENST00000423358 553 ntBASIC4.74□□□□□ -1.65
SLC44A4Q53GD3 RPL30P3-201ENST00000424262 333 ntBASIC4.74□□□□□ -1.65
SLC44A4Q53GD3 AL138785.1-201ENST00000425821 331 ntBASIC4.74□□□□□ -1.65
SLC44A4Q53GD3 COX6CP15-201ENST00000426313 211 ntBASIC4.74□□□□□ -1.65
SLC44A4Q53GD3 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.74□□□□□ -1.65
SLC44A4Q53GD3 AL512286.1-201ENST00000439244 400 ntBASIC4.74□□□□□ -1.65
SLC44A4Q53GD3 AL357520.1-201ENST00000441557 453 ntBASIC4.74□□□□□ -1.65
SLC44A4Q53GD3 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC4.74□□□□□ -1.65
SLC44A4Q53GD3 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.74□□□□□ -1.65
SLC44A4Q53GD3 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.74□□□□□ -1.65
SLC44A4Q53GD3 AC026410.2-201ENST00000460281 156 ntBASIC4.74□□□□□ -1.65
SLC44A4Q53GD3 RPL5P30-201ENST00000465511 891 ntBASIC4.74□□□□□ -1.65
SLC44A4Q53GD3 AC090142.1-201ENST00000465776 462 ntBASIC4.74□□□□□ -1.65
SLC44A4Q53GD3 RPL7P22-201ENST00000466005 733 ntBASIC4.74□□□□□ -1.65
SLC44A4Q53GD3 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.74□□□□□ -1.65
SLC44A4Q53GD3 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC4.74□□□□□ -1.65
SLC44A4Q53GD3 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.74□□□□□ -1.65
SLC44A4Q53GD3 AC108941.1-201ENST00000502853 530 ntBASIC4.74□□□□□ -1.65
SLC44A4Q53GD3 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.74□□□□□ -1.65
SLC44A4Q53GD3 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 123.2 ms