Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC5.52□□□□□ -1.53
CCDC144BQ3MJ40 snoU13.3-201ENST00000459441 104 ntBASIC5.52□□□□□ -1.53
CCDC144BQ3MJ40 AC013356.1-201ENST00000489027 564 ntBASIC5.52□□□□□ -1.53
CCDC144BQ3MJ40 AC108145.1-201ENST00000503770 153 ntBASIC5.52□□□□□ -1.53
CCDC144BQ3MJ40 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC5.52□□□□□ -1.53
CCDC144BQ3MJ40 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC5.52□□□□□ -1.53
CCDC144BQ3MJ40 MTND4LP31-201ENST00000514859 294 ntBASIC5.52□□□□□ -1.53
CCDC144BQ3MJ40 RNU6-405P-201ENST00000516637 110 ntBASIC5.52□□□□□ -1.53
CCDC144BQ3MJ40 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC5.52□□□□□ -1.53
CCDC144BQ3MJ40 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC5.52□□□□□ -1.53
CCDC144BQ3MJ40 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC5.52□□□□□ -1.53
CCDC144BQ3MJ40 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC5.52□□□□□ -1.53
CCDC144BQ3MJ40 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC5.52□□□□□ -1.53
CCDC144BQ3MJ40 SETP7-201ENST00000552169 453 ntBASIC5.52□□□□□ -1.53
CCDC144BQ3MJ40 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC5.52□□□□□ -1.53
CCDC144BQ3MJ40 ZNF519P3-201ENST00000557158 1032 ntBASIC5.52□□□□□ -1.53
CCDC144BQ3MJ40 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC5.52□□□□□ -1.53
CCDC144BQ3MJ40 FAM27B-201ENST00000610601 213 ntBASIC5.52□□□□□ -1.53
CCDC144BQ3MJ40 AC013562.2-201ENST00000611632 603 ntBASIC5.52□□□□□ -1.53
CCDC144BQ3MJ40 AC015540.1-201ENST00000615828 501 ntBASIC5.52□□□□□ -1.53
CCDC144BQ3MJ40 AC079597.1-201ENST00000624306 508 ntBASIC5.52□□□□□ -1.53
CCDC144BQ3MJ40 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC5.52□□□□□ -1.53
CCDC144BQ3MJ40 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.52□□□□□ -1.53
CCDC144BQ3MJ40 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CCDC144BQ3MJ40 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.52□□□□□ -1.53
CCDC144BQ3MJ40 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC5.52□□□□□ -1.53
CCDC144BQ3MJ40 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CCDC144BQ3MJ40 AL136964.1-201ENST00000622038 2990 ntBASIC5.52□□□□□ -1.53
CCDC144BQ3MJ40 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CCDC144BQ3MJ40 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC5.51□□□□□ -1.53
CCDC144BQ3MJ40 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
CCDC144BQ3MJ40 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
CCDC144BQ3MJ40 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC5.51□□□□□ -1.53
CCDC144BQ3MJ40 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CCDC144BQ3MJ40 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CCDC144BQ3MJ40 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CCDC144BQ3MJ40 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CCDC144BQ3MJ40 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC5.51□□□□□ -1.53
CCDC144BQ3MJ40 AC083843.3-201ENST00000623679 2186 ntBASIC5.51□□□□□ -1.53
CCDC144BQ3MJ40 OR4K15-201ENST00000305051 1216 ntBASIC5.51□□□□□ -1.53
CCDC144BQ3MJ40 RNU6-989P-201ENST00000362756 107 ntBASIC5.51□□□□□ -1.53
CCDC144BQ3MJ40 RNU4-75P-201ENST00000364621 146 ntBASIC5.51□□□□□ -1.53
CCDC144BQ3MJ40 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CCDC144BQ3MJ40 SNORA70F-201ENST00000384142 135 ntBASIC5.51□□□□□ -1.53
CCDC144BQ3MJ40 Y_RNA.505-201ENST00000384489 102 ntBASIC5.51□□□□□ -1.53
CCDC144BQ3MJ40 MIR124-3-201ENST00000384866 87 ntBASIC5.51□□□□□ -1.53
CCDC144BQ3MJ40 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
CCDC144BQ3MJ40 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
CCDC144BQ3MJ40 U3.30-201ENST00000391308 210 ntBASIC5.51□□□□□ -1.53
CCDC144BQ3MJ40 AL359704.1-201ENST00000411586 781 ntBASIC5.51□□□□□ -1.53
CCDC144BQ3MJ40 AC245052.5-201ENST00000416320 649 ntBASIC5.51□□□□□ -1.53
CCDC144BQ3MJ40 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC5.51□□□□□ -1.53
CCDC144BQ3MJ40 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC5.51□□□□□ -1.53
CCDC144BQ3MJ40 AC091862.1-201ENST00000438016 1100 ntBASIC5.51□□□□□ -1.53
CCDC144BQ3MJ40 MTND1P9-201ENST00000453775 944 ntBASIC5.51□□□□□ -1.53
CCDC144BQ3MJ40 AC099563.1-201ENST00000456086 418 ntBASIC5.51□□□□□ -1.53
CCDC144BQ3MJ40 RPS5P7-201ENST00000456664 608 ntBASIC5.51□□□□□ -1.53
CCDC144BQ3MJ40 CYCSP34-201ENST00000458172 304 ntBASIC5.51□□□□□ -1.53
CCDC144BQ3MJ40 AC053481.1-201ENST00000467217 306 ntBASIC5.51□□□□□ -1.53
CCDC144BQ3MJ40 AC021382.1-201ENST00000483523 359 ntBASIC5.51□□□□□ -1.53
CCDC144BQ3MJ40 SCARNA22-201ENST00000503991 125 ntBASIC5.51□□□□□ -1.53
CCDC144BQ3MJ40 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC5.51□□□□□ -1.53
CCDC144BQ3MJ40 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CCDC144BQ3MJ40 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC5.51□□□□□ -1.53
CCDC144BQ3MJ40 RN7SKP46-201ENST00000515942 234 ntBASIC5.51□□□□□ -1.53
CCDC144BQ3MJ40 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC5.51□□□□□ -1.53
CCDC144BQ3MJ40 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC5.51□□□□□ -1.53
CCDC144BQ3MJ40 AC009643.1-201ENST00000532030 391 ntBASIC5.51□□□□□ -1.53
CCDC144BQ3MJ40 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC5.51□□□□□ -1.53
CCDC144BQ3MJ40 AL391156.1-201ENST00000554965 554 ntBASIC5.51□□□□□ -1.53
CCDC144BQ3MJ40 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC5.51□□□□□ -1.53
CCDC144BQ3MJ40 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC5.51□□□□□ -1.53
CCDC144BQ3MJ40 AC233702.9-201ENST00000581528 203 ntBASIC5.51□□□□□ -1.53
CCDC144BQ3MJ40 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC5.51□□□□□ -1.53
CCDC144BQ3MJ40 MIR4715-201ENST00000584117 79 ntBASIC5.51□□□□□ -1.53
CCDC144BQ3MJ40 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC5.51□□□□□ -1.53
CCDC144BQ3MJ40 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC5.51□□□□□ -1.53
CCDC144BQ3MJ40 AL136363.2-201ENST00000604173 851 ntBASIC5.51□□□□□ -1.53
CCDC144BQ3MJ40 AC011816.2-201ENST00000607089 556 ntBASIC5.51□□□□□ -1.53
CCDC144BQ3MJ40 AL049794.2-201ENST00000616301 365 ntBASIC5.51□□□□□ -1.53
CCDC144BQ3MJ40 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC5.51□□□□□ -1.53
CCDC144BQ3MJ40 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
CCDC144BQ3MJ40 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
CCDC144BQ3MJ40 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CCDC144BQ3MJ40 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
CCDC144BQ3MJ40 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC5.51□□□□□ -1.53
CCDC144BQ3MJ40 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
CCDC144BQ3MJ40 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CCDC144BQ3MJ40 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
CCDC144BQ3MJ40 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CCDC144BQ3MJ40 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CCDC144BQ3MJ40 LDHAL6CP-202ENST00000550738 3224 ntBASIC5.5□□□□□ -1.53
CCDC144BQ3MJ40 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC5.5□□□□□ -1.53
CCDC144BQ3MJ40 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC5.5□□□□□ -1.53
CCDC144BQ3MJ40 AC074029.4-201ENST00000624796 1859 ntBASIC5.5□□□□□ -1.53
CCDC144BQ3MJ40 AL357515.1-201ENST00000402967 542 ntBASIC5.5□□□□□ -1.53
CCDC144BQ3MJ40 AP000580.1-201ENST00000404439 358 ntBASIC5.5□□□□□ -1.53
CCDC144BQ3MJ40 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC5.5□□□□□ -1.53
CCDC144BQ3MJ40 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC5.5□□□□□ -1.53
CCDC144BQ3MJ40 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms