Protein–RNA interactions for Protein: Q16586

SGCA, Alpha-sarcoglycan, humanhuman

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCAQ16586 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
SGCAQ16586 RPS15AP40-201ENST00000419621 391 ntBASIC3.12□□□□□ -1.91
SGCAQ16586 RPL17P36-201ENST00000420302 549 ntBASIC3.12□□□□□ -1.91
SGCAQ16586 AC244098.2-201ENST00000422068 99 ntBASIC3.12□□□□□ -1.91
SGCAQ16586 FO393414.1-201ENST00000428697 1184 ntBASIC3.12□□□□□ -1.91
SGCAQ16586 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC3.12□□□□□ -1.91
SGCAQ16586 CKS1BP5-201ENST00000434172 273 ntBASIC3.12□□□□□ -1.91
SGCAQ16586 AC007389.2-201ENST00000434630 306 ntBASIC3.12□□□□□ -1.91
SGCAQ16586 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.12□□□□□ -1.91
SGCAQ16586 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC3.12□□□□□ -1.91
SGCAQ16586 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.12□□□□□ -1.91
SGCAQ16586 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
SGCAQ16586 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC3.12□□□□□ -1.91
SGCAQ16586 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.12□□□□□ -1.91
SGCAQ16586 AC006539.3-201ENST00000454258 129 ntBASIC3.12□□□□□ -1.91
SGCAQ16586 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC3.12□□□□□ -1.91
SGCAQ16586 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
SGCAQ16586 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC3.12□□□□□ -1.91
SGCAQ16586 AC023598.1-201ENST00000472521 361 ntBASIC3.12□□□□□ -1.91
SGCAQ16586 HMGN2P13-201ENST00000476476 274 ntBASIC3.12□□□□□ -1.91
SGCAQ16586 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC3.12□□□□□ -1.91
SGCAQ16586 PRELID3BP4-201ENST00000515476 571 ntBASIC3.12□□□□□ -1.91
SGCAQ16586 RNA5SP385-201ENST00000515947 110 ntBASIC3.12□□□□□ -1.91
SGCAQ16586 SNORA70.18-201ENST00000516696 98 ntBASIC3.12□□□□□ -1.91
SGCAQ16586 RN7SKP282-201ENST00000516824 299 ntBASIC3.12□□□□□ -1.91
SGCAQ16586 AC023632.4-201ENST00000517783 191 ntBASIC3.12□□□□□ -1.91
SGCAQ16586 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.12□□□□□ -1.91
SGCAQ16586 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.12□□□□□ -1.91
SGCAQ16586 AC006518.1-201ENST00000541449 943 ntBASIC3.12□□□□□ -1.91
SGCAQ16586 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC3.12□□□□□ -1.91
SGCAQ16586 DUXAP6-201ENST00000553858 601 ntBASIC3.12□□□□□ -1.91
SGCAQ16586 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.12□□□□□ -1.91
SGCAQ16586 AC006557.5-201ENST00000603126 811 ntBASIC3.12□□□□□ -1.91
SGCAQ16586 AP002906.1-201ENST00000603405 233 ntBASIC3.12□□□□□ -1.91
SGCAQ16586 BNIP3P19-201ENST00000605397 577 ntBASIC3.12□□□□□ -1.91
SGCAQ16586 AC078880.5-201ENST00000617845 421 ntBASIC3.12□□□□□ -1.91
SGCAQ16586 AL590240.3-201ENST00000621416 943 ntBASIC3.12□□□□□ -1.91
SGCAQ16586 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC3.12□□□□□ -1.91
SGCAQ16586 AF117829.1-206ENST00000621883 3802 ntBASIC3.12□□□□□ -1.91
SGCAQ16586 AC068880.4-201ENST00000623082 495 ntBASIC3.12□□□□□ -1.91
SGCAQ16586 AL356863.1-201ENST00000623378 1080 ntBASIC3.12□□□□□ -1.91
SGCAQ16586 AC093875.1-201ENST00000623688 504 ntBASIC3.12□□□□□ -1.91
SGCAQ16586 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC3.12□□□□□ -1.91
SGCAQ16586 AC106730.3-201ENST00000624568 641 ntBASIC3.12□□□□□ -1.91
SGCAQ16586 FAM157B-203ENST00000639350 358 ntBASIC3.12□□□□□ -1.91
SGCAQ16586 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
SGCAQ16586 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
SGCAQ16586 ZNF285B-201ENST00000561698 1767 ntBASIC3.12□□□□□ -1.91
SGCAQ16586 AC107081.3-201ENST00000612715 2034 ntBASIC3.12□□□□□ -1.91
SGCAQ16586 AC068647.1-201ENST00000489539 2265 ntBASIC3.12□□□□□ -1.91
SGCAQ16586 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
SGCAQ16586 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
SGCAQ16586 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.11□□□□□ -1.91
SGCAQ16586 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
SGCAQ16586 RNU6-468P-201ENST00000384003 109 ntBASIC3.11□□□□□ -1.91
SGCAQ16586 RNU6-932P-201ENST00000391108 106 ntBASIC3.11□□□□□ -1.91
SGCAQ16586 ATP5A1P2-201ENST00000412323 255 ntBASIC3.11□□□□□ -1.91
SGCAQ16586 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC3.11□□□□□ -1.91
SGCAQ16586 AC068533.1-201ENST00000418542 415 ntBASIC3.11□□□□□ -1.91
SGCAQ16586 DBIP2-201ENST00000419076 262 ntBASIC3.11□□□□□ -1.91
SGCAQ16586 PAICSP7-201ENST00000419829 962 ntBASIC3.11□□□□□ -1.91
SGCAQ16586 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.11□□□□□ -1.91
SGCAQ16586 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC3.11□□□□□ -1.91
SGCAQ16586 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.11□□□□□ -1.91
SGCAQ16586 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.11□□□□□ -1.91
SGCAQ16586 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC3.11□□□□□ -1.91
SGCAQ16586 SNORD105B-201ENST00000458770 79 ntBASIC3.11□□□□□ -1.91
SGCAQ16586 RPL21P18-201ENST00000469899 480 ntBASIC3.11□□□□□ -1.91
SGCAQ16586 ACTG1P13-201ENST00000486987 1043 ntBASIC3.11□□□□□ -1.91
SGCAQ16586 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
SGCAQ16586 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
SGCAQ16586 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.11□□□□□ -1.91
SGCAQ16586 AC104619.4-201ENST00000510773 249 ntBASIC3.11□□□□□ -1.91
SGCAQ16586 RNU5A-7P-201ENST00000515979 116 ntBASIC3.11□□□□□ -1.91
SGCAQ16586 RNU6-416P-201ENST00000516265 103 ntBASIC3.11□□□□□ -1.91
SGCAQ16586 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC3.11□□□□□ -1.91
SGCAQ16586 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC3.11□□□□□ -1.91
SGCAQ16586 OR4R3P-201ENST00000525084 838 ntBASIC3.11□□□□□ -1.91
SGCAQ16586 RGS4-207ENST00000527809 817 ntTSL 4 BASIC3.11□□□□□ -1.91
SGCAQ16586 AC124293.1-201ENST00000530034 493 ntBASIC3.11□□□□□ -1.91
SGCAQ16586 AP000619.3-201ENST00000535634 1127 ntBASIC3.11□□□□□ -1.91
SGCAQ16586 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.11□□□□□ -1.91
SGCAQ16586 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC3.11□□□□□ -1.91
SGCAQ16586 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC3.11□□□□□ -1.91
SGCAQ16586 BNIP3P5-201ENST00000562290 498 ntBASIC3.11□□□□□ -1.91
SGCAQ16586 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC3.11□□□□□ -1.91
SGCAQ16586 AC034268.2-201ENST00000571784 482 ntBASIC3.11□□□□□ -1.91
SGCAQ16586 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC3.11□□□□□ -1.91
SGCAQ16586 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC3.11□□□□□ -1.91
SGCAQ16586 SNRPGP15-201ENST00000600149 222 ntBASIC3.11□□□□□ -1.91
SGCAQ16586 YWHAQP7-201ENST00000603536 658 ntBASIC3.11□□□□□ -1.91
SGCAQ16586 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
SGCAQ16586 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC3.11□□□□□ -1.91
SGCAQ16586 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
SGCAQ16586 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
SGCAQ16586 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
SGCAQ16586 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.11□□□□□ -1.91
SGCAQ16586 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.11□□□□□ -1.91
SGCAQ16586 AC025263.3-201ENST00000622965 1396 ntBASIC3.11□□□□□ -1.91
SGCAQ16586 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms