Protein–RNA interactions for Protein: Q12950

FOXD4, Forkhead box protein D4, humanhuman

Predicted RBP Predictions only

Length 439 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD4Q12950 MIR4277-201ENST00000578298 84 ntBASIC4.35□□□□□ -1.71
FOXD4Q12950 MRPS35P3-201ENST00000603189 709 ntBASIC4.35□□□□□ -1.71
FOXD4Q12950 AC012669.1-201ENST00000603209 283 ntBASIC4.35□□□□□ -1.71
FOXD4Q12950 AC020910.3-201ENST00000603701 874 ntBASIC4.35□□□□□ -1.71
FOXD4Q12950 AC009220.3-201ENST00000604318 586 ntBASIC4.35□□□□□ -1.71
FOXD4Q12950 AP001330.4-201ENST00000604350 154 ntBASIC4.35□□□□□ -1.71
FOXD4Q12950 AC007497.1-201ENST00000610421 561 ntBASIC4.35□□□□□ -1.71
FOXD4Q12950 AC005086.4-201ENST00000623065 213 ntBASIC4.35□□□□□ -1.71
FOXD4Q12950 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
FOXD4Q12950 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
FOXD4Q12950 AC097714.1-201ENST00000511272 1647 ntBASIC4.35□□□□□ -1.71
FOXD4Q12950 AP000776.1-201ENST00000530032 1663 ntBASIC4.35□□□□□ -1.71
FOXD4Q12950 ZNF137P-201ENST00000456718 1920 ntBASIC4.34□□□□□ -1.71
FOXD4Q12950 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.34□□□□□ -1.71
FOXD4Q12950 RNA5SP388-201ENST00000362584 119 ntBASIC4.34□□□□□ -1.71
FOXD4Q12950 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
FOXD4Q12950 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
FOXD4Q12950 AL136372.1-201ENST00000403060 228 ntBASIC4.34□□□□□ -1.71
FOXD4Q12950 AL138878.1-201ENST00000405131 347 ntBASIC4.34□□□□□ -1.71
FOXD4Q12950 VN1R8P-201ENST00000407739 893 ntBASIC4.34□□□□□ -1.71
FOXD4Q12950 AL450338.1-201ENST00000407987 512 ntBASIC4.34□□□□□ -1.71
FOXD4Q12950 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC4.34□□□□□ -1.71
FOXD4Q12950 AC092447.6-201ENST00000414578 210 ntBASIC4.34□□□□□ -1.71
FOXD4Q12950 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC4.34□□□□□ -1.71
FOXD4Q12950 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC4.34□□□□□ -1.71
FOXD4Q12950 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC4.34□□□□□ -1.71
FOXD4Q12950 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC4.34□□□□□ -1.71
FOXD4Q12950 PSMA6P3-201ENST00000428242 164 ntBASIC4.34□□□□□ -1.71
FOXD4Q12950 CETN4P-201ENST00000432407 469 ntBASIC4.34□□□□□ -1.71
FOXD4Q12950 MUPP-201ENST00000438111 566 ntBASIC4.34□□□□□ -1.71
FOXD4Q12950 AC092427.1-201ENST00000439177 601 ntBASIC4.34□□□□□ -1.71
FOXD4Q12950 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
FOXD4Q12950 RPL7P22-201ENST00000466005 733 ntBASIC4.34□□□□□ -1.71
FOXD4Q12950 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.34□□□□□ -1.71
FOXD4Q12950 MTCYBP17-201ENST00000503579 789 ntBASIC4.34□□□□□ -1.71
FOXD4Q12950 AC114981.1-201ENST00000503897 678 ntBASIC4.34□□□□□ -1.71
FOXD4Q12950 AC104090.1-201ENST00000506341 1171 ntBASIC4.34□□□□□ -1.71
FOXD4Q12950 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC4.34□□□□□ -1.71
FOXD4Q12950 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC4.34□□□□□ -1.71
FOXD4Q12950 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.34□□□□□ -1.71
FOXD4Q12950 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC4.34□□□□□ -1.71
FOXD4Q12950 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC4.34□□□□□ -1.71
FOXD4Q12950 RNU5A-4P-201ENST00000516588 111 ntBASIC4.34□□□□□ -1.71
FOXD4Q12950 RN7SKP92-201ENST00000517266 244 ntBASIC4.34□□□□□ -1.71
FOXD4Q12950 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC4.34□□□□□ -1.71
FOXD4Q12950 UBTFL10-201ENST00000528532 562 ntBASIC4.34□□□□□ -1.71
FOXD4Q12950 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.34□□□□□ -1.71
FOXD4Q12950 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC4.34□□□□□ -1.71
FOXD4Q12950 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.34□□□□□ -1.71
FOXD4Q12950 AL354943.1-201ENST00000572103 781 ntBASIC4.34□□□□□ -1.71
FOXD4Q12950 MIR5047-201ENST00000579212 100 ntBASIC4.34□□□□□ -1.71
FOXD4Q12950 MIR4637-201ENST00000582405 84 ntBASIC4.34□□□□□ -1.71
FOXD4Q12950 AC022726.1-201ENST00000587475 207 ntBASIC4.34□□□□□ -1.71
FOXD4Q12950 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC4.34□□□□□ -1.71
FOXD4Q12950 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.34□□□□□ -1.71
FOXD4Q12950 AC004987.4-201ENST00000603383 338 ntBASIC4.34□□□□□ -1.71
FOXD4Q12950 AL139395.1-201ENST00000603662 160 ntBASIC4.34□□□□□ -1.71
FOXD4Q12950 AL451044.1-201ENST00000604867 238 ntBASIC4.34□□□□□ -1.71
FOXD4Q12950 AL592436.1-201ENST00000605135 558 ntBASIC4.34□□□□□ -1.71
FOXD4Q12950 AL391358.1-201ENST00000605342 190 ntBASIC4.34□□□□□ -1.71
FOXD4Q12950 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC4.34□□□□□ -1.71
FOXD4Q12950 AC068831.7-201ENST00000616954 363 ntBASIC4.34□□□□□ -1.71
FOXD4Q12950 5S_rRNA.12-201ENST00000617631 107 ntBASIC4.34□□□□□ -1.71
FOXD4Q12950 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
FOXD4Q12950 CU459211.1-201ENST00000635667 749 ntBASIC4.34□□□□□ -1.71
FOXD4Q12950 OR52H1-202ENST00000641796 1061 ntBASIC4.34□□□□□ -1.71
FOXD4Q12950 SLC10A5P1-201ENST00000379063 1306 ntBASIC4.34□□□□□ -1.71
FOXD4Q12950 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
FOXD4Q12950 AC110774.1-201ENST00000623567 2018 ntBASIC4.34□□□□□ -1.71
FOXD4Q12950 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC4.34□□□□□ -1.71
FOXD4Q12950 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.72
FOXD4Q12950 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
FOXD4Q12950 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
FOXD4Q12950 CUL1P1-201ENST00000509510 2425 ntBASIC4.33□□□□□ -1.72
FOXD4Q12950 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC4.33□□□□□ -1.72
FOXD4Q12950 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
FOXD4Q12950 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
FOXD4Q12950 AC021755.1-201ENST00000559747 1447 ntBASIC4.33□□□□□ -1.72
FOXD4Q12950 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
FOXD4Q12950 OR4G11P-202ENST00000642116 1414 ntBASIC4.33□□□□□ -1.72
FOXD4Q12950 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
FOXD4Q12950 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC4.33□□□□□ -1.72
FOXD4Q12950 RNU6-1155P-201ENST00000363554 107 ntBASIC4.33□□□□□ -1.72
FOXD4Q12950 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC4.33□□□□□ -1.72
FOXD4Q12950 RNU6-157P-201ENST00000383957 107 ntBASIC4.33□□□□□ -1.72
FOXD4Q12950 MIR195-201ENST00000385194 87 ntBASIC4.33□□□□□ -1.72
FOXD4Q12950 RSL24D1P4-201ENST00000400938 484 ntBASIC4.33□□□□□ -1.72
FOXD4Q12950 RNA5SP113-201ENST00000410486 84 ntBASIC4.33□□□□□ -1.72
FOXD4Q12950 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC4.33□□□□□ -1.72
FOXD4Q12950 OFD1P11Y-201ENST00000418213 1177 ntBASIC4.33□□□□□ -1.72
FOXD4Q12950 AL139421.1-201ENST00000423010 169 ntBASIC4.33□□□□□ -1.72
FOXD4Q12950 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC4.33□□□□□ -1.72
FOXD4Q12950 MTND1P32-201ENST00000433043 938 ntBASIC4.33□□□□□ -1.72
FOXD4Q12950 RPL36AP15-201ENST00000444514 266 ntBASIC4.33□□□□□ -1.72
FOXD4Q12950 RPL39P6-201ENST00000448289 150 ntBASIC4.33□□□□□ -1.72
FOXD4Q12950 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.33□□□□□ -1.72
FOXD4Q12950 AC098826.2-201ENST00000452011 651 ntBASIC4.33□□□□□ -1.72
FOXD4Q12950 VN1R32P-201ENST00000452234 905 ntBASIC4.33□□□□□ -1.72
FOXD4Q12950 Z82190.1-201ENST00000454534 490 ntBASIC4.33□□□□□ -1.72
FOXD4Q12950 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 120.7 ms