Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 AL355379.1-201ENST00000405542 640 ntBASIC3.86□□□□□ -1.79
CDK3Q00526 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC3.86□□□□□ -1.79
CDK3Q00526 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC3.86□□□□□ -1.79
CDK3Q00526 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC3.86□□□□□ -1.79
CDK3Q00526 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC3.86□□□□□ -1.79
CDK3Q00526 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC3.86□□□□□ -1.79
CDK3Q00526 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CDK3Q00526 RPS25P9-201ENST00000435591 252 ntBASIC3.86□□□□□ -1.79
CDK3Q00526 AL162388.1-201ENST00000450912 352 ntBASIC3.86□□□□□ -1.79
CDK3Q00526 AC098826.2-201ENST00000452011 651 ntBASIC3.86□□□□□ -1.79
CDK3Q00526 RPL18AP17-201ENST00000455326 198 ntBASIC3.86□□□□□ -1.79
CDK3Q00526 PLGLA-201ENST00000465668 449 ntBASIC3.86□□□□□ -1.79
CDK3Q00526 AC146507.1-201ENST00000468335 354 ntBASIC3.86□□□□□ -1.79
CDK3Q00526 PABPC1P3-201ENST00000469174 459 ntBASIC3.86□□□□□ -1.79
CDK3Q00526 AC022034.3-201ENST00000471393 478 ntBASIC3.86□□□□□ -1.79
CDK3Q00526 MTND2P14-201ENST00000482139 351 ntBASIC3.86□□□□□ -1.79
CDK3Q00526 RPS6P4-201ENST00000494693 758 ntBASIC3.86□□□□□ -1.79
CDK3Q00526 AC025445.1-201ENST00000502728 300 ntBASIC3.86□□□□□ -1.79
CDK3Q00526 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CDK3Q00526 AC093767.1-201ENST00000504523 156 ntBASIC3.86□□□□□ -1.79
CDK3Q00526 VWA8P1-201ENST00000510889 176 ntBASIC3.86□□□□□ -1.79
CDK3Q00526 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.86□□□□□ -1.79
CDK3Q00526 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC3.86□□□□□ -1.79
CDK3Q00526 RNU6-352P-201ENST00000516908 107 ntBASIC3.86□□□□□ -1.79
CDK3Q00526 RNU4ATAC10P-201ENST00000516967 122 ntBASIC3.86□□□□□ -1.79
CDK3Q00526 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC3.86□□□□□ -1.79
CDK3Q00526 MTCO1P49-201ENST00000523429 802 ntBASIC3.86□□□□□ -1.79
CDK3Q00526 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC3.86□□□□□ -1.79
CDK3Q00526 MED28P5-201ENST00000528254 438 ntBASIC3.86□□□□□ -1.79
CDK3Q00526 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC3.86□□□□□ -1.79
CDK3Q00526 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.86□□□□□ -1.79
CDK3Q00526 AC034105.4-201ENST00000568304 277 ntBASIC3.86□□□□□ -1.79
CDK3Q00526 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC3.86□□□□□ -1.79
CDK3Q00526 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.86□□□□□ -1.79
CDK3Q00526 VN1R82P-201ENST00000601481 356 ntBASIC3.86□□□□□ -1.79
CDK3Q00526 AC006270.3-201ENST00000605967 1036 ntBASIC3.86□□□□□ -1.79
CDK3Q00526 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.86□□□□□ -1.79
CDK3Q00526 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC3.86□□□□□ -1.79
CDK3Q00526 AC090116.1-201ENST00000615679 446 ntBASIC3.86□□□□□ -1.79
CDK3Q00526 AL591424.2-201ENST00000617023 128 ntBASIC3.86□□□□□ -1.79
CDK3Q00526 AC009318.4-201ENST00000620496 486 ntBASIC3.86□□□□□ -1.79
CDK3Q00526 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CDK3Q00526 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC3.86□□□□□ -1.79
CDK3Q00526 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CDK3Q00526 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC3.86□□□□□ -1.79
CDK3Q00526 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC3.86□□□□□ -1.79
CDK3Q00526 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
CDK3Q00526 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CDK3Q00526 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.86□□□□□ -1.79
CDK3Q00526 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CDK3Q00526 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CDK3Q00526 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CDK3Q00526 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.86□□□□□ -1.79
CDK3Q00526 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.86□□□□□ -1.79
CDK3Q00526 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
CDK3Q00526 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CDK3Q00526 ANKRD20A10P-201ENST00000457591 1515 ntBASIC3.85□□□□□ -1.79
CDK3Q00526 MTCO1P24-201ENST00000515438 1558 ntBASIC3.85□□□□□ -1.79
CDK3Q00526 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CDK3Q00526 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CDK3Q00526 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CDK3Q00526 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CDK3Q00526 RNA5SP52-201ENST00000362448 134 ntBASIC3.85□□□□□ -1.79
CDK3Q00526 MIR554-201ENST00000384874 96 ntBASIC3.85□□□□□ -1.79
CDK3Q00526 MT-TC-201ENST00000387405 66 ntBASIC3.85□□□□□ -1.79
CDK3Q00526 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CDK3Q00526 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC3.85□□□□□ -1.79
CDK3Q00526 AC004552.1-201ENST00000419089 348 ntBASIC3.85□□□□□ -1.79
CDK3Q00526 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC3.85□□□□□ -1.79
CDK3Q00526 RPS12P5-201ENST00000423449 371 ntBASIC3.85□□□□□ -1.79
CDK3Q00526 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC3.85□□□□□ -1.79
CDK3Q00526 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC3.85□□□□□ -1.79
CDK3Q00526 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC3.85□□□□□ -1.79
CDK3Q00526 RPS26P3-201ENST00000470205 348 ntBASIC3.85□□□□□ -1.79
CDK3Q00526 AC090543.2-201ENST00000483963 348 ntBASIC3.85□□□□□ -1.79
CDK3Q00526 AC004057.1-201ENST00000485827 348 ntBASIC3.85□□□□□ -1.79
CDK3Q00526 RPL31P61-201ENST00000496160 376 ntBASIC3.85□□□□□ -1.79
CDK3Q00526 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC3.85□□□□□ -1.79
CDK3Q00526 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC3.85□□□□□ -1.79
CDK3Q00526 AC020593.1-201ENST00000507399 299 ntBASIC3.85□□□□□ -1.79
CDK3Q00526 TMEM248P1-201ENST00000510579 951 ntBASIC3.85□□□□□ -1.79
CDK3Q00526 MTCO3P44-201ENST00000510977 541 ntBASIC3.85□□□□□ -1.79
CDK3Q00526 AC026412.2-201ENST00000512270 1075 ntBASIC3.85□□□□□ -1.79
CDK3Q00526 RNU6-583P-201ENST00000516012 92 ntBASIC3.85□□□□□ -1.79
CDK3Q00526 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.85□□□□□ -1.79
CDK3Q00526 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC3.85□□□□□ -1.79
CDK3Q00526 PTK2-220ENST00000520151 573 ntTSL 4 BASIC3.85□□□□□ -1.79
CDK3Q00526 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC3.85□□□□□ -1.79
CDK3Q00526 OR5AK1P-201ENST00000524837 922 ntBASIC3.85□□□□□ -1.79
CDK3Q00526 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.85□□□□□ -1.79
CDK3Q00526 ERP27-202ENST00000540097 993 ntTSL 2 BASIC3.85□□□□□ -1.79
CDK3Q00526 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC3.85□□□□□ -1.79
CDK3Q00526 CASC16-202ENST00000563844 610 ntTSL 3 BASIC3.85□□□□□ -1.79
CDK3Q00526 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC3.85□□□□□ -1.79
CDK3Q00526 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC3.85□□□□□ -1.79
CDK3Q00526 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC3.85□□□□□ -1.79
CDK3Q00526 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC3.85□□□□□ -1.79
CDK3Q00526 AL031281.1-201ENST00000604049 488 ntBASIC3.85□□□□□ -1.79
CDK3Q00526 AC012603.1-201ENST00000606424 528 ntBASIC3.85□□□□□ -1.79
CDK3Q00526 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 149.6 ms