Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC3.37□□□□□ -1.87
LMO4P61968 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC3.37□□□□□ -1.87
LMO4P61968 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC3.37□□□□□ -1.87
LMO4P61968 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC3.37□□□□□ -1.87
LMO4P61968 AC012435.1-202ENST00000568772 240 ntBASIC3.37□□□□□ -1.87
LMO4P61968 AC120057.2-201ENST00000571520 271 ntBASIC3.37□□□□□ -1.87
LMO4P61968 EIF1P4-201ENST00000572664 335 ntBASIC3.37□□□□□ -1.87
LMO4P61968 RPL23AP87-202ENST00000573039 466 ntBASIC3.37□□□□□ -1.87
LMO4P61968 AC025627.2-201ENST00000576220 160 ntBASIC3.37□□□□□ -1.87
LMO4P61968 AC012417.1-201ENST00000582307 1039 ntBASIC3.37□□□□□ -1.87
LMO4P61968 MIR3158-1-201ENST00000583596 81 ntBASIC3.37□□□□□ -1.87
LMO4P61968 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC3.37□□□□□ -1.87
LMO4P61968 U73023.1-201ENST00000603134 700 ntBASIC3.37□□□□□ -1.87
LMO4P61968 AC006270.3-201ENST00000605967 1036 ntBASIC3.37□□□□□ -1.87
LMO4P61968 AC131235.4-201ENST00000609288 620 ntBASIC3.37□□□□□ -1.87
LMO4P61968 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
LMO4P61968 AC009509.4-201ENST00000619202 509 ntBASIC3.37□□□□□ -1.87
LMO4P61968 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
LMO4P61968 MIR7702-201ENST00000621931 59 ntBASIC3.37□□□□□ -1.87
LMO4P61968 AC008443.7-201ENST00000622195 246 ntBASIC3.37□□□□□ -1.87
LMO4P61968 AC116618.1-201ENST00000634617 774 ntBASIC3.37□□□□□ -1.87
LMO4P61968 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC3.37□□□□□ -1.87
LMO4P61968 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC3.37□□□□□ -1.87
LMO4P61968 AC017104.4-201ENST00000636283 1592 ntBASIC3.37□□□□□ -1.87
LMO4P61968 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC3.37□□□□□ -1.87
LMO4P61968 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
LMO4P61968 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
LMO4P61968 AC025125.1-201ENST00000624743 1922 ntBASIC3.36□□□□□ -1.87
LMO4P61968 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
LMO4P61968 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.36□□□□□ -1.87
LMO4P61968 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.36□□□□□ -1.87
LMO4P61968 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
LMO4P61968 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC3.36□□□□□ -1.87
LMO4P61968 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
LMO4P61968 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC3.36□□□□□ -1.87
LMO4P61968 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
LMO4P61968 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
LMO4P61968 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
LMO4P61968 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
LMO4P61968 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.36□□□□□ -1.87
LMO4P61968 OR52B1P-201ENST00000316506 909 ntBASIC3.36□□□□□ -1.87
LMO4P61968 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
LMO4P61968 RNU4-21P-201ENST00000362802 126 ntBASIC3.36□□□□□ -1.87
LMO4P61968 U3.4-201ENST00000363352 213 ntBASIC3.36□□□□□ -1.87
LMO4P61968 AL359837.1-201ENST00000381357 287 ntBASIC3.36□□□□□ -1.87
LMO4P61968 RNU6-213P-201ENST00000384051 104 ntBASIC3.36□□□□□ -1.87
LMO4P61968 MIR23B-201ENST00000384832 97 ntBASIC3.36□□□□□ -1.87
LMO4P61968 MIR554-201ENST00000384874 96 ntBASIC3.36□□□□□ -1.87
LMO4P61968 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
LMO4P61968 VN1R8P-201ENST00000407739 893 ntBASIC3.36□□□□□ -1.87
LMO4P61968 RPS23P10-201ENST00000416185 486 ntBASIC3.36□□□□□ -1.87
LMO4P61968 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC3.36□□□□□ -1.87
LMO4P61968 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC3.36□□□□□ -1.87
LMO4P61968 AL590103.1-201ENST00000434488 307 ntBASIC3.36□□□□□ -1.87
LMO4P61968 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.36□□□□□ -1.87
LMO4P61968 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.36□□□□□ -1.87
LMO4P61968 MTATP6P13-201ENST00000438531 667 ntBASIC3.36□□□□□ -1.87
LMO4P61968 AL031667.1-201ENST00000440222 725 ntBASIC3.36□□□□□ -1.87
LMO4P61968 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
LMO4P61968 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC3.36□□□□□ -1.87
LMO4P61968 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC3.36□□□□□ -1.87
LMO4P61968 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC3.36□□□□□ -1.87
LMO4P61968 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC3.36□□□□□ -1.87
LMO4P61968 MTCYBP1-201ENST00000454315 1119 ntBASIC3.36□□□□□ -1.87
LMO4P61968 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC3.36□□□□□ -1.87
LMO4P61968 RPL23AP2-201ENST00000471227 466 ntBASIC3.36□□□□□ -1.87
LMO4P61968 RPL29P14-201ENST00000495837 428 ntBASIC3.36□□□□□ -1.87
LMO4P61968 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC3.36□□□□□ -1.87
LMO4P61968 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
LMO4P61968 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
LMO4P61968 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC3.36□□□□□ -1.87
LMO4P61968 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
LMO4P61968 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
LMO4P61968 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC3.36□□□□□ -1.87
LMO4P61968 AC109458.1-201ENST00000508858 316 ntBASIC3.36□□□□□ -1.87
LMO4P61968 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
LMO4P61968 AC079395.1-201ENST00000510981 262 ntBASIC3.36□□□□□ -1.87
LMO4P61968 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
LMO4P61968 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC3.36□□□□□ -1.87
LMO4P61968 AC106038.2-201ENST00000520706 568 ntBASIC3.36□□□□□ -1.87
LMO4P61968 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC3.36□□□□□ -1.87
LMO4P61968 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC3.36□□□□□ -1.87
LMO4P61968 AP002963.1-201ENST00000530590 184 ntBASIC3.36□□□□□ -1.87
LMO4P61968 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC3.36□□□□□ -1.87
LMO4P61968 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC3.36□□□□□ -1.87
LMO4P61968 AP000873.5-201ENST00000533906 236 ntBASIC3.36□□□□□ -1.87
LMO4P61968 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC3.36□□□□□ -1.87
LMO4P61968 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.36□□□□□ -1.87
LMO4P61968 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC3.36□□□□□ -1.87
LMO4P61968 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.36□□□□□ -1.87
LMO4P61968 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC3.36□□□□□ -1.87
LMO4P61968 NIFKP8-201ENST00000560500 874 ntBASIC3.36□□□□□ -1.87
LMO4P61968 HSPE1P5-201ENST00000561489 272 ntBASIC3.36□□□□□ -1.87
LMO4P61968 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC3.36□□□□□ -1.87
LMO4P61968 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC3.36□□□□□ -1.87
LMO4P61968 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC3.36□□□□□ -1.87
LMO4P61968 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC3.36□□□□□ -1.87
LMO4P61968 AC074051.3-201ENST00000570238 358 ntBASIC3.36□□□□□ -1.87
LMO4P61968 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC3.36□□□□□ -1.87
LMO4P61968 MIR4666A-201ENST00000580160 79 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 120.2 ms