Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
PEX3P56589 SNORA63.1-201ENST00000362493 131 ntBASIC3.74□□□□□ -1.81
PEX3P56589 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
PEX3P56589 MIR16-1-201ENST00000385271 89 ntBASIC3.74□□□□□ -1.81
PEX3P56589 MTCO2P8-201ENST00000412213 658 ntBASIC3.74□□□□□ -1.81
PEX3P56589 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC3.74□□□□□ -1.81
PEX3P56589 SFR1P2-201ENST00000421841 730 ntBASIC3.74□□□□□ -1.81
PEX3P56589 C1DP1-201ENST00000426049 402 ntBASIC3.74□□□□□ -1.81
PEX3P56589 AL031736.2-201ENST00000426573 787 ntBASIC3.74□□□□□ -1.81
PEX3P56589 AL451062.2-201ENST00000427515 271 ntBASIC3.74□□□□□ -1.81
PEX3P56589 AL645638.1-201ENST00000440519 361 ntBASIC3.74□□□□□ -1.81
PEX3P56589 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC3.74□□□□□ -1.81
PEX3P56589 AL592437.1-201ENST00000443781 492 ntBASIC3.74□□□□□ -1.81
PEX3P56589 AC097262.1-201ENST00000452559 548 ntBASIC3.74□□□□□ -1.81
PEX3P56589 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC3.74□□□□□ -1.81
PEX3P56589 RPS4XP10-201ENST00000465034 731 ntBASIC3.74□□□□□ -1.81
PEX3P56589 XACT-201ENST00000468762 497 ntTSL 5 BASIC3.74□□□□□ -1.81
PEX3P56589 RPL7P49-201ENST00000471402 708 ntBASIC3.74□□□□□ -1.81
PEX3P56589 MTND6P6-201ENST00000478031 263 ntBASIC3.74□□□□□ -1.81
PEX3P56589 AL049830.2-201ENST00000480072 201 ntBASIC3.74□□□□□ -1.81
PEX3P56589 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
PEX3P56589 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC3.74□□□□□ -1.81
PEX3P56589 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC3.74□□□□□ -1.81
PEX3P56589 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
PEX3P56589 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
PEX3P56589 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC3.74□□□□□ -1.81
PEX3P56589 AC004217.3-201ENST00000551552 878 ntBASIC3.74□□□□□ -1.81
PEX3P56589 AC011611.1-201ENST00000552179 197 ntBASIC3.74□□□□□ -1.81
PEX3P56589 NCAPGP2-201ENST00000557911 754 ntBASIC3.74□□□□□ -1.81
PEX3P56589 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
PEX3P56589 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC3.74□□□□□ -1.81
PEX3P56589 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC3.74□□□□□ -1.81
PEX3P56589 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.74□□□□□ -1.81
PEX3P56589 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC3.74□□□□□ -1.81
PEX3P56589 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.74□□□□□ -1.81
PEX3P56589 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC3.74□□□□□ -1.81
PEX3P56589 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.74□□□□□ -1.81
PEX3P56589 AL020997.3-201ENST00000602843 359 ntBASIC3.74□□□□□ -1.81
PEX3P56589 AC083899.3-201ENST00000603413 594 ntBASIC3.74□□□□□ -1.81
PEX3P56589 AC002487.1-201ENST00000604565 994 ntBASIC3.74□□□□□ -1.81
PEX3P56589 AC000123.2-201ENST00000623124 461 ntBASIC3.74□□□□□ -1.81
PEX3P56589 AC004943.3-201ENST00000624116 600 ntBASIC3.74□□□□□ -1.81
PEX3P56589 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC3.74□□□□□ -1.81
PEX3P56589 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.74□□□□□ -1.81
PEX3P56589 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC3.74□□□□□ -1.81
PEX3P56589 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
PEX3P56589 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
PEX3P56589 AL356274.2-201ENST00000624379 3752 ntBASIC3.74□□□□□ -1.81
PEX3P56589 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.73□□□□□ -1.81
PEX3P56589 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
PEX3P56589 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.73□□□□□ -1.81
PEX3P56589 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
PEX3P56589 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
PEX3P56589 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.73□□□□□ -1.81
PEX3P56589 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
PEX3P56589 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
PEX3P56589 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC3.73□□□□□ -1.81
PEX3P56589 SNORA51.12-201ENST00000384448 134 ntBASIC3.73□□□□□ -1.81
PEX3P56589 RNU6-1151P-201ENST00000384684 107 ntBASIC3.73□□□□□ -1.81
PEX3P56589 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
PEX3P56589 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
PEX3P56589 OR51A3P-201ENST00000413596 924 ntBASIC3.73□□□□□ -1.81
PEX3P56589 PAICSP7-201ENST00000419829 962 ntBASIC3.73□□□□□ -1.81
PEX3P56589 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.73□□□□□ -1.81
PEX3P56589 MTCO2P23-201ENST00000425216 680 ntBASIC3.73□□□□□ -1.81
PEX3P56589 AL138785.1-201ENST00000425821 331 ntBASIC3.73□□□□□ -1.81
PEX3P56589 AP000907.1-201ENST00000428428 510 ntBASIC3.73□□□□□ -1.81
PEX3P56589 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.73□□□□□ -1.81
PEX3P56589 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC3.73□□□□□ -1.81
PEX3P56589 RAB11AP1-201ENST00000442978 646 ntBASIC3.73□□□□□ -1.81
PEX3P56589 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
PEX3P56589 HMGB3P8-201ENST00000449709 577 ntBASIC3.73□□□□□ -1.81
PEX3P56589 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC3.73□□□□□ -1.81
PEX3P56589 RN7SL330P-201ENST00000469709 307 ntBASIC3.73□□□□□ -1.81
PEX3P56589 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC3.73□□□□□ -1.81
PEX3P56589 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.73□□□□□ -1.81
PEX3P56589 AC112198.1-201ENST00000505369 1220 ntBASIC3.73□□□□□ -1.81
PEX3P56589 AC113420.1-201ENST00000507903 571 ntBASIC3.73□□□□□ -1.81
PEX3P56589 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC3.73□□□□□ -1.81
PEX3P56589 TPT1P8-201ENST00000510120 555 ntBASIC3.73□□□□□ -1.81
PEX3P56589 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.73□□□□□ -1.81
PEX3P56589 AL442163.2-201ENST00000553912 710 ntBASIC3.73□□□□□ -1.81
PEX3P56589 NIFKP8-201ENST00000560500 874 ntBASIC3.73□□□□□ -1.81
PEX3P56589 MIR4760-201ENST00000585040 80 ntBASIC3.73□□□□□ -1.81
PEX3P56589 NF1P5-201ENST00000588287 448 ntBASIC3.73□□□□□ -1.81
PEX3P56589 BNIP3P33-201ENST00000598912 569 ntBASIC3.73□□□□□ -1.81
PEX3P56589 AC073387.2-201ENST00000604797 784 ntBASIC3.73□□□□□ -1.81
PEX3P56589 AC026790.2-201ENST00000606282 430 ntBASIC3.73□□□□□ -1.81
PEX3P56589 AL050303.3-201ENST00000613704 284 ntBASIC3.73□□□□□ -1.81
PEX3P56589 AC022960.3-201ENST00000619794 441 ntBASIC3.73□□□□□ -1.81
PEX3P56589 C2orf27A-204ENST00000623058 969 ntBASIC3.73□□□□□ -1.81
PEX3P56589 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
PEX3P56589 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
PEX3P56589 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC3.72□□□□□ -1.81
PEX3P56589 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
PEX3P56589 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
PEX3P56589 SGO1P1-201ENST00000603525 1447 ntBASIC3.72□□□□□ -1.81
PEX3P56589 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
PEX3P56589 ANKRD36P1-201ENST00000344424 659 ntBASIC3.72□□□□□ -1.81
PEX3P56589 RNU4-51P-201ENST00000364206 140 ntBASIC3.72□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 123.7 ms