Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.9□□□□□ -1.63
GFRA1P56159 AL136372.1-201ENST00000403060 228 ntBASIC4.9□□□□□ -1.63
GFRA1P56159 AL133388.1-201ENST00000404509 287 ntBASIC4.9□□□□□ -1.63
GFRA1P56159 FAT1P1-201ENST00000406588 507 ntBASIC4.9□□□□□ -1.63
GFRA1P56159 RNU6-193P-201ENST00000410977 107 ntBASIC4.9□□□□□ -1.63
GFRA1P56159 AL391219.1-201ENST00000422570 483 ntBASIC4.9□□□□□ -1.63
GFRA1P56159 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC4.9□□□□□ -1.63
GFRA1P56159 DUTP6-201ENST00000425573 462 ntBASIC4.9□□□□□ -1.63
GFRA1P56159 RPS27AP12-201ENST00000429552 465 ntBASIC4.9□□□□□ -1.63
GFRA1P56159 MTATP6P16-201ENST00000434543 526 ntBASIC4.9□□□□□ -1.63
GFRA1P56159 GSTM5P1-201ENST00000434751 660 ntBASIC4.9□□□□□ -1.63
GFRA1P56159 AL163193.1-201ENST00000444895 788 ntBASIC4.9□□□□□ -1.63
GFRA1P56159 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC4.9□□□□□ -1.63
GFRA1P56159 AC010655.1-201ENST00000449336 292 ntBASIC4.9□□□□□ -1.63
GFRA1P56159 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC4.9□□□□□ -1.63
GFRA1P56159 RPS29P15-201ENST00000458329 171 ntBASIC4.9□□□□□ -1.63
GFRA1P56159 AC007537.2-201ENST00000472093 511 ntBASIC4.9□□□□□ -1.63
GFRA1P56159 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.9□□□□□ -1.63
GFRA1P56159 HMGN1P13-201ENST00000505795 138 ntBASIC4.9□□□□□ -1.63
GFRA1P56159 AC026427.2-201ENST00000506228 536 ntBASIC4.9□□□□□ -1.63
GFRA1P56159 PGAM1P13-201ENST00000507497 754 ntBASIC4.9□□□□□ -1.63
GFRA1P56159 GLUD1P3-202ENST00000508551 200 ntBASIC4.9□□□□□ -1.63
GFRA1P56159 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC4.9□□□□□ -1.63
GFRA1P56159 RNU7-30P-201ENST00000516835 62 ntBASIC4.9□□□□□ -1.63
GFRA1P56159 RNA5SP34-201ENST00000516887 130 ntBASIC4.9□□□□□ -1.63
GFRA1P56159 AC105029.1-201ENST00000520250 669 ntBASIC4.9□□□□□ -1.63
GFRA1P56159 FAM60DP-201ENST00000524174 632 ntBASIC4.9□□□□□ -1.63
GFRA1P56159 PSMA2P1-201ENST00000526365 646 ntBASIC4.9□□□□□ -1.63
GFRA1P56159 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC4.9□□□□□ -1.63
GFRA1P56159 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.9□□□□□ -1.63
GFRA1P56159 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC4.9□□□□□ -1.63
GFRA1P56159 AL049779.2-201ENST00000553847 315 ntBASIC4.9□□□□□ -1.63
GFRA1P56159 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.9□□□□□ -1.63
GFRA1P56159 ANP32BP3-201ENST00000559213 706 ntBASIC4.9□□□□□ -1.63
GFRA1P56159 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC4.9□□□□□ -1.63
GFRA1P56159 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
GFRA1P56159 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
GFRA1P56159 AC007687.1-201ENST00000602704 304 ntBASIC4.9□□□□□ -1.63
GFRA1P56159 AL512329.2-201ENST00000607350 548 ntBASIC4.9□□□□□ -1.63
GFRA1P56159 AC005858.4-201ENST00000623191 700 ntBASIC4.9□□□□□ -1.63
GFRA1P56159 FRG1KP-201ENST00000623592 341 ntBASIC4.9□□□□□ -1.63
GFRA1P56159 AL136313.1-201ENST00000624804 202 ntBASIC4.9□□□□□ -1.63
GFRA1P56159 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
GFRA1P56159 ATM-228ENST00000639240 498 ntTSL 5 BASIC4.9□□□□□ -1.63
GFRA1P56159 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.9□□□□□ -1.63
GFRA1P56159 ATM-230ENST00000640388 578 ntTSL 5 BASIC4.9□□□□□ -1.63
GFRA1P56159 AC079776.5-201ENST00000641920 211 ntBASIC4.9□□□□□ -1.63
GFRA1P56159 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
GFRA1P56159 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC4.9□□□□□ -1.63
GFRA1P56159 SAMMSON-213ENST00000641336 1521 ntBASIC4.9□□□□□ -1.63
GFRA1P56159 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC4.9□□□□□ -1.63
GFRA1P56159 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.9□□□□□ -1.63
GFRA1P56159 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
GFRA1P56159 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.63
GFRA1P56159 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC4.9□□□□□ -1.63
GFRA1P56159 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC4.9□□□□□ -1.63
GFRA1P56159 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
GFRA1P56159 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC4.9□□□□□ -1.63
GFRA1P56159 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
GFRA1P56159 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
GFRA1P56159 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
GFRA1P56159 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC4.9□□□□□ -1.63
GFRA1P56159 AC104964.3-201ENST00000606115 2860 ntBASIC4.9□□□□□ -1.63
GFRA1P56159 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.9□□□□□ -1.63
GFRA1P56159 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
GFRA1P56159 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC4.89□□□□□ -1.63
GFRA1P56159 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.89□□□□□ -1.63
GFRA1P56159 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
GFRA1P56159 PABPC1P6-201ENST00000445594 1829 ntBASIC4.89□□□□□ -1.63
GFRA1P56159 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.89□□□□□ -1.63
GFRA1P56159 AC073343.1-201ENST00000328239 651 ntBASIC4.89□□□□□ -1.63
GFRA1P56159 AC067945.1-201ENST00000342609 618 ntBASIC4.89□□□□□ -1.63
GFRA1P56159 Y_RNA.231-201ENST00000364358 102 ntBASIC4.89□□□□□ -1.63
GFRA1P56159 RNU6-637P-201ENST00000384050 107 ntBASIC4.89□□□□□ -1.63
GFRA1P56159 RNU6-171P-201ENST00000384354 107 ntBASIC4.89□□□□□ -1.63
GFRA1P56159 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
GFRA1P56159 TANK-203ENST00000402568 878 ntTSL 5 BASIC4.89□□□□□ -1.63
GFRA1P56159 MIR1178-201ENST00000408396 91 ntBASIC4.89□□□□□ -1.63
GFRA1P56159 RN7SKP17-201ENST00000411242 351 ntBASIC4.89□□□□□ -1.63
GFRA1P56159 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC4.89□□□□□ -1.63
GFRA1P56159 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC4.89□□□□□ -1.63
GFRA1P56159 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.89□□□□□ -1.63
GFRA1P56159 NCOR1P3-201ENST00000420479 303 ntBASIC4.89□□□□□ -1.63
GFRA1P56159 MRPL50P4-201ENST00000446432 475 ntBASIC4.89□□□□□ -1.63
GFRA1P56159 MTND3P16-201ENST00000452205 344 ntBASIC4.89□□□□□ -1.63
GFRA1P56159 AC234775.1-201ENST00000454247 670 ntBASIC4.89□□□□□ -1.63
GFRA1P56159 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC4.89□□□□□ -1.63
GFRA1P56159 HMGN2P26-201ENST00000463169 339 ntBASIC4.89□□□□□ -1.63
GFRA1P56159 MRPS17P3-201ENST00000465453 385 ntBASIC4.89□□□□□ -1.63
GFRA1P56159 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC4.89□□□□□ -1.63
GFRA1P56159 RPS21P4-201ENST00000487122 248 ntBASIC4.89□□□□□ -1.63
GFRA1P56159 SNORA70.11-201ENST00000515987 138 ntBASIC4.89□□□□□ -1.63
GFRA1P56159 SNORA70.13-201ENST00000516116 138 ntBASIC4.89□□□□□ -1.63
GFRA1P56159 RNU6-64P-201ENST00000517119 105 ntBASIC4.89□□□□□ -1.63
GFRA1P56159 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC4.89□□□□□ -1.63
GFRA1P56159 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC4.89□□□□□ -1.63
GFRA1P56159 HMGB1P40-201ENST00000525121 540 ntBASIC4.89□□□□□ -1.63
GFRA1P56159 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC4.89□□□□□ -1.63
GFRA1P56159 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC4.89□□□□□ -1.63
GFRA1P56159 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 124.7 ms