Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 RPL7P26-201ENST00000333817 754 ntBASIC3.29□□□□□ -1.88
PKNOX1P55347 MIR148B-201ENST00000362252 99 ntBASIC3.29□□□□□ -1.88
PKNOX1P55347 SNORA63.3-201ENST00000362682 132 ntBASIC3.29□□□□□ -1.88
PKNOX1P55347 RNU6-619P-201ENST00000365146 108 ntBASIC3.29□□□□□ -1.88
PKNOX1P55347 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC3.29□□□□□ -1.88
PKNOX1P55347 MIR16-1-201ENST00000385271 89 ntBASIC3.29□□□□□ -1.88
PKNOX1P55347 TAF13P2-201ENST00000416876 286 ntBASIC3.29□□□□□ -1.88
PKNOX1P55347 RPS3AP9-201ENST00000417027 792 ntBASIC3.29□□□□□ -1.88
PKNOX1P55347 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC3.29□□□□□ -1.88
PKNOX1P55347 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC3.29□□□□□ -1.88
PKNOX1P55347 PTGES3P5-201ENST00000455109 434 ntBASIC3.29□□□□□ -1.88
PKNOX1P55347 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.29□□□□□ -1.88
PKNOX1P55347 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC3.29□□□□□ -1.88
PKNOX1P55347 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC3.29□□□□□ -1.88
PKNOX1P55347 PHBP14-201ENST00000512887 367 ntBASIC3.29□□□□□ -1.88
PKNOX1P55347 MTCO3P27-201ENST00000514397 196 ntBASIC3.29□□□□□ -1.88
PKNOX1P55347 HMGB1P1-201ENST00000522557 636 ntBASIC3.29□□□□□ -1.88
PKNOX1P55347 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.29□□□□□ -1.88
PKNOX1P55347 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.29□□□□□ -1.88
PKNOX1P55347 AC103843.2-201ENST00000530523 682 ntBASIC3.29□□□□□ -1.88
PKNOX1P55347 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC3.29□□□□□ -1.88
PKNOX1P55347 CR383656.14-201ENST00000551951 406 ntBASIC3.29□□□□□ -1.88
PKNOX1P55347 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.29□□□□□ -1.88
PKNOX1P55347 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.29□□□□□ -1.88
PKNOX1P55347 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.29□□□□□ -1.88
PKNOX1P55347 AC007566.2-201ENST00000603642 413 ntBASIC3.29□□□□□ -1.88
PKNOX1P55347 SNORA51-201ENST00000606420 132 ntBASIC3.29□□□□□ -1.88
PKNOX1P55347 AC120053.1-201ENST00000607706 736 ntBASIC3.29□□□□□ -1.88
PKNOX1P55347 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.29□□□□□ -1.88
PKNOX1P55347 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC3.29□□□□□ -1.88
PKNOX1P55347 BX649567.1-201ENST00000642071 1134 ntBASIC3.29□□□□□ -1.88
PKNOX1P55347 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
PKNOX1P55347 AL645937.1-201ENST00000641739 1652 ntBASIC3.29□□□□□ -1.88
PKNOX1P55347 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
PKNOX1P55347 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.29□□□□□ -1.88
PKNOX1P55347 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
PKNOX1P55347 SGO1P1-201ENST00000603525 1447 ntBASIC3.28□□□□□ -1.88
PKNOX1P55347 AL365440.1-201ENST00000436135 2167 ntBASIC3.28□□□□□ -1.88
PKNOX1P55347 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
PKNOX1P55347 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
PKNOX1P55347 FABP12P1-201ENST00000401911 322 ntBASIC3.28□□□□□ -1.88
PKNOX1P55347 SFR1P1-201ENST00000403720 688 ntBASIC3.28□□□□□ -1.88
PKNOX1P55347 RAB28P1-201ENST00000411517 641 ntBASIC3.28□□□□□ -1.88
PKNOX1P55347 AC012065.2-201ENST00000421295 375 ntBASIC3.28□□□□□ -1.88
PKNOX1P55347 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
PKNOX1P55347 RPL21P112-201ENST00000434403 463 ntBASIC3.28□□□□□ -1.88
PKNOX1P55347 AP000949.1-201ENST00000438328 629 ntBASIC3.28□□□□□ -1.88
PKNOX1P55347 ISCA1P2-201ENST00000438679 421 ntBASIC3.28□□□□□ -1.88
PKNOX1P55347 HMGB3P11-201ENST00000440127 604 ntBASIC3.28□□□□□ -1.88
PKNOX1P55347 NF1P3-201ENST00000457709 450 ntBASIC3.28□□□□□ -1.88
PKNOX1P55347 AP002884.2-201ENST00000471647 395 ntBASIC3.28□□□□□ -1.88
PKNOX1P55347 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3.28□□□□□ -1.88
PKNOX1P55347 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC3.28□□□□□ -1.88
PKNOX1P55347 RNU5A-7P-201ENST00000515979 116 ntBASIC3.28□□□□□ -1.88
PKNOX1P55347 AP003355.1-201ENST00000518956 587 ntBASIC3.28□□□□□ -1.88
PKNOX1P55347 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.28□□□□□ -1.88
PKNOX1P55347 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.28□□□□□ -1.88
PKNOX1P55347 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.28□□□□□ -1.88
PKNOX1P55347 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC3.28□□□□□ -1.88
PKNOX1P55347 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.28□□□□□ -1.88
PKNOX1P55347 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC3.28□□□□□ -1.88
PKNOX1P55347 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC3.28□□□□□ -1.88
PKNOX1P55347 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.28□□□□□ -1.88
PKNOX1P55347 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.28□□□□□ -1.88
PKNOX1P55347 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC3.28□□□□□ -1.88
PKNOX1P55347 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.28□□□□□ -1.88
PKNOX1P55347 U73479.1-201ENST00000618062 168 ntBASIC3.28□□□□□ -1.88
PKNOX1P55347 SNORD39.4-201ENST00000620099 78 ntBASIC3.28□□□□□ -1.88
PKNOX1P55347 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
PKNOX1P55347 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
PKNOX1P55347 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.28□□□□□ -1.88
PKNOX1P55347 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.28□□□□□ -1.88
PKNOX1P55347 AL356274.2-201ENST00000624379 3752 ntBASIC3.28□□□□□ -1.88
PKNOX1P55347 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.27□□□□□ -1.89
PKNOX1P55347 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC3.27□□□□□ -1.89
PKNOX1P55347 MTND5P31-201ENST00000419366 1374 ntBASIC3.27□□□□□ -1.89
PKNOX1P55347 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
PKNOX1P55347 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.27□□□□□ -1.89
PKNOX1P55347 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
PKNOX1P55347 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
PKNOX1P55347 RNA5SP383-201ENST00000362934 120 ntBASIC3.27□□□□□ -1.89
PKNOX1P55347 RNA5SP515-201ENST00000364570 118 ntBASIC3.27□□□□□ -1.89
PKNOX1P55347 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC3.27□□□□□ -1.89
PKNOX1P55347 OR1L1-202ENST00000373686 1083 ntBASIC3.27□□□□□ -1.89
PKNOX1P55347 RNU6-1226P-201ENST00000384317 107 ntBASIC3.27□□□□□ -1.89
PKNOX1P55347 RNU6-441P-201ENST00000384545 106 ntBASIC3.27□□□□□ -1.89
PKNOX1P55347 RN7SKP159-201ENST00000410657 292 ntBASIC3.27□□□□□ -1.89
PKNOX1P55347 Y_RNA.625-201ENST00000411256 107 ntBASIC3.27□□□□□ -1.89
PKNOX1P55347 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.27□□□□□ -1.89
PKNOX1P55347 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
PKNOX1P55347 AC244098.2-201ENST00000422068 99 ntBASIC3.27□□□□□ -1.89
PKNOX1P55347 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC3.27□□□□□ -1.89
PKNOX1P55347 ATP5JP1-201ENST00000431631 322 ntBASIC3.27□□□□□ -1.89
PKNOX1P55347 AC234064.1-201ENST00000436312 247 ntBASIC3.27□□□□□ -1.89
PKNOX1P55347 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.27□□□□□ -1.89
PKNOX1P55347 SEPT14P24-201ENST00000447236 180 ntBASIC3.27□□□□□ -1.89
PKNOX1P55347 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.27□□□□□ -1.89
PKNOX1P55347 SLC31A1P1-201ENST00000451221 567 ntBASIC3.27□□□□□ -1.89
PKNOX1P55347 RBMY2UP-201ENST00000453474 324 ntBASIC3.27□□□□□ -1.89
PKNOX1P55347 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 190.5 ms