Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC2.77□□□□□ -1.97
BRCA2P51587 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
BRCA2P51587 AC027514.1-201ENST00000588561 1603 ntBASIC2.76□□□□□ -1.97
BRCA2P51587 AC087565.3-202ENST00000642085 1603 ntBASIC2.76□□□□□ -1.97
BRCA2P51587 RPS7P13-201ENST00000413955 498 ntBASIC2.76□□□□□ -1.97
BRCA2P51587 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.76□□□□□ -1.97
BRCA2P51587 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC2.76□□□□□ -1.97
BRCA2P51587 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.76□□□□□ -1.97
BRCA2P51587 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
BRCA2P51587 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC2.76□□□□□ -1.97
BRCA2P51587 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
BRCA2P51587 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
BRCA2P51587 AL354710.1-201ENST00000453641 246 ntBASIC2.76□□□□□ -1.97
BRCA2P51587 AC006539.3-201ENST00000454258 129 ntBASIC2.76□□□□□ -1.97
BRCA2P51587 AL024509.2-201ENST00000493462 493 ntBASIC2.76□□□□□ -1.97
BRCA2P51587 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
BRCA2P51587 AL670379.6-201ENST00000603753 252 ntBASIC2.76□□□□□ -1.97
BRCA2P51587 AL670379.11-201ENST00000604059 253 ntBASIC2.76□□□□□ -1.97
BRCA2P51587 AL670379.10-201ENST00000604330 253 ntBASIC2.76□□□□□ -1.97
BRCA2P51587 AC008162.1-201ENST00000604718 254 ntBASIC2.76□□□□□ -1.97
BRCA2P51587 AL670379.1-201ENST00000604752 252 ntBASIC2.76□□□□□ -1.97
BRCA2P51587 AL670379.2-201ENST00000604983 252 ntBASIC2.76□□□□□ -1.97
BRCA2P51587 AL670379.5-201ENST00000605253 252 ntBASIC2.76□□□□□ -1.97
BRCA2P51587 AL670379.4-201ENST00000605279 254 ntBASIC2.76□□□□□ -1.97
BRCA2P51587 AL670379.12-201ENST00000605291 253 ntBASIC2.76□□□□□ -1.97
BRCA2P51587 AL670379.8-201ENST00000605353 252 ntBASIC2.76□□□□□ -1.97
BRCA2P51587 AL670379.9-201ENST00000605428 253 ntBASIC2.76□□□□□ -1.97
BRCA2P51587 AL670379.7-201ENST00000605823 252 ntBASIC2.76□□□□□ -1.97
BRCA2P51587 AL596275.2-204ENST00000641628 552 ntBASIC2.76□□□□□ -1.97
BRCA2P51587 AL596275.2-206ENST00000641957 626 ntBASIC2.76□□□□□ -1.97
BRCA2P51587 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC2.76□□□□□ -1.97
BRCA2P51587 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC2.76□□□□□ -1.97
BRCA2P51587 RNU1-17P-201ENST00000363022 152 ntBASIC2.75□□□□□ -1.97
BRCA2P51587 Y_RNA.112-201ENST00000363250 102 ntBASIC2.75□□□□□ -1.97
BRCA2P51587 AC010881.1-201ENST00000433830 235 ntBASIC2.75□□□□□ -1.97
BRCA2P51587 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
BRCA2P51587 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC2.75□□□□□ -1.97
BRCA2P51587 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
BRCA2P51587 GABPAP-201ENST00000419271 1356 ntBASIC2.75□□□□□ -1.97
BRCA2P51587 SNORA26.9-201ENST00000391322 122 ntBASIC2.75□□□□□ -1.97
BRCA2P51587 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
BRCA2P51587 GSTA9P-201ENST00000406231 611 ntBASIC2.75□□□□□ -1.97
BRCA2P51587 AC007064.1-201ENST00000412238 351 ntBASIC2.75□□□□□ -1.97
BRCA2P51587 NANOGP5-201ENST00000424456 877 ntBASIC2.75□□□□□ -1.97
BRCA2P51587 AC117522.2-201ENST00000510049 657 ntBASIC2.75□□□□□ -1.97
BRCA2P51587 AC112673.1-201ENST00000513168 575 ntBASIC2.75□□□□□ -1.97
BRCA2P51587 AC096725.1-201ENST00000514266 313 ntBASIC2.75□□□□□ -1.97
BRCA2P51587 MIR449C-201ENST00000516047 92 ntBASIC2.75□□□□□ -1.97
BRCA2P51587 AC023813.4-201ENST00000607580 580 ntBASIC2.75□□□□□ -1.97
BRCA2P51587 Y_RNA.122-201ENST00000363331 96 ntBASIC2.75□□□□□ -1.97
BRCA2P51587 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC2.75□□□□□ -1.97
BRCA2P51587 RPS21P8-201ENST00000413365 247 ntBASIC2.75□□□□□ -1.97
BRCA2P51587 AC107081.1-201ENST00000414975 361 ntBASIC2.75□□□□□ -1.97
BRCA2P51587 AC004801.2-202ENST00000463559 283 ntBASIC2.75□□□□□ -1.97
BRCA2P51587 AC016687.1-201ENST00000482574 353 ntBASIC2.75□□□□□ -1.97
BRCA2P51587 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC2.75□□□□□ -1.97
BRCA2P51587 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC2.74□□□□□ -1.97
BRCA2P51587 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.74□□□□□ -1.97
BRCA2P51587 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC2.74□□□□□ -1.97
BRCA2P51587 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.74□□□□□ -1.97
BRCA2P51587 BX005019.1-201ENST00000561881 1810 ntBASIC2.74□□□□□ -1.97
BRCA2P51587 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
BRCA2P51587 RNU1-73P-201ENST00000383971 164 ntBASIC2.74□□□□□ -1.97
BRCA2P51587 RPL30P2-201ENST00000414021 291 ntBASIC2.74□□□□□ -1.97
BRCA2P51587 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC2.74□□□□□ -1.97
BRCA2P51587 IGKV2D-23-201ENST00000518179 286 ntBASIC2.74□□□□□ -1.97
BRCA2P51587 AC010338.1-201ENST00000621823 717 ntBASIC2.74□□□□□ -1.97
BRCA2P51587 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
BRCA2P51587 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
BRCA2P51587 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC2.74□□□□□ -1.97
BRCA2P51587 AC245291.1-201ENST00000419501 328 ntBASIC2.74□□□□□ -1.97
BRCA2P51587 RPS26P30-201ENST00000443431 335 ntBASIC2.74□□□□□ -1.97
BRCA2P51587 RPL23AP49-201ENST00000492925 468 ntBASIC2.74□□□□□ -1.97
BRCA2P51587 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC2.74□□□□□ -1.97
BRCA2P51587 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
BRCA2P51587 AL022099.1-201ENST00000604551 712 ntBASIC2.74□□□□□ -1.97
BRCA2P51587 snoU13.31-201ENST00000607291 104 ntBASIC2.74□□□□□ -1.97
BRCA2P51587 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC2.73□□□□□ -1.97
BRCA2P51587 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC2.73□□□□□ -1.97
BRCA2P51587 MDM4-214ENST00000612738 9407 ntTSL 5 BASIC2.73□□□□□ -1.97
BRCA2P51587 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC2.73□□□□□ -1.97
BRCA2P51587 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC2.73□□□□□ -1.97
BRCA2P51587 AP004247.3-201ENST00000608682 624 ntBASIC2.73□□□□□ -1.97
BRCA2P51587 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
BRCA2P51587 AC008079.2-201ENST00000623543 20396 ntBASIC2.73□□□□□ -1.97
BRCA2P51587 RNU6-661P-201ENST00000362409 107 ntBASIC2.73□□□□□ -1.97
BRCA2P51587 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
BRCA2P51587 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
BRCA2P51587 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC2.73□□□□□ -1.97
BRCA2P51587 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC2.73□□□□□ -1.97
BRCA2P51587 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC2.73□□□□□ -1.97
BRCA2P51587 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
BRCA2P51587 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC2.73□□□□□ -1.97
BRCA2P51587 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
BRCA2P51587 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
BRCA2P51587 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
BRCA2P51587 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
BRCA2P51587 ELOCP13-201ENST00000443934 329 ntBASIC2.72□□□□□ -1.97
BRCA2P51587 RN7SL75P-201ENST00000461926 281 ntBASIC2.72□□□□□ -1.97
BRCA2P51587 NPM1P29-201ENST00000483112 803 ntBASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms