Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 AC009063.1-201ENST00000563342 702 ntBASIC4.57□□□□□ -1.68
SMARCA4P51532 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC4.56□□□□□ -1.68
SMARCA4P51532 AC016687.1-201ENST00000482574 353 ntBASIC4.56□□□□□ -1.68
SMARCA4P51532 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC4.56□□□□□ -1.68
SMARCA4P51532 AC034244.2-201ENST00000514668 858 ntBASIC4.56□□□□□ -1.68
SMARCA4P51532 U4.3-201ENST00000621047 82 ntBASIC4.56□□□□□ -1.68
SMARCA4P51532 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC4.56□□□□□ -1.68
SMARCA4P51532 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC4.56□□□□□ -1.68
SMARCA4P51532 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
SMARCA4P51532 AC087565.3-202ENST00000642085 1603 ntBASIC4.56□□□□□ -1.68
SMARCA4P51532 AC010733.2-201ENST00000589496 5702 ntBASIC4.55□□□□□ -1.68
SMARCA4P51532 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SMARCA4P51532 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC4.55□□□□□ -1.68
SMARCA4P51532 AC002553.2-201ENST00000453217 340 ntBASIC4.55□□□□□ -1.68
SMARCA4P51532 RPL36AP51-201ENST00000487216 318 ntBASIC4.55□□□□□ -1.68
SMARCA4P51532 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC4.55□□□□□ -1.68
SMARCA4P51532 AC016573.1-201ENST00000523205 539 ntTSL 3 BASIC4.55□□□□□ -1.68
SMARCA4P51532 AC128657.1-201ENST00000549459 145 ntBASIC4.55□□□□□ -1.68
SMARCA4P51532 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC4.55□□□□□ -1.68
SMARCA4P51532 TTN-204ENST00000360870 18218 ntTSL 5 BASIC4.55□□□□□ -1.68
SMARCA4P51532 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SMARCA4P51532 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SMARCA4P51532 SNORD114-30-201ENST00000364448 72 ntBASIC4.54□□□□□ -1.68
SMARCA4P51532 FGF7P3-201ENST00000454645 303 ntBASIC4.54□□□□□ -1.68
SMARCA4P51532 FAM172BP-201ENST00000487497 1089 ntBASIC4.54□□□□□ -1.68
SMARCA4P51532 ENSA-210ENST00000503241 574 ntTSL 3 BASIC4.54□□□□□ -1.68
SMARCA4P51532 RGS4-209ENST00000531057 544 ntTSL 4 BASIC4.54□□□□□ -1.68
SMARCA4P51532 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.54□□□□□ -1.68
SMARCA4P51532 AC008121.2-201ENST00000614647 523 ntBASIC4.54□□□□□ -1.68
SMARCA4P51532 U7.8-201ENST00000619968 63 ntBASIC4.54□□□□□ -1.68
SMARCA4P51532 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC4.54□□□□□ -1.68
SMARCA4P51532 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC4.54□□□□□ -1.68
SMARCA4P51532 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
SMARCA4P51532 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC4.54□□□□□ -1.68
SMARCA4P51532 SNORD114-1-201ENST00000362705 72 ntBASIC4.54□□□□□ -1.68
SMARCA4P51532 RPL9P32-201ENST00000464118 620 ntBASIC4.54□□□□□ -1.68
SMARCA4P51532 SUMO2P4-201ENST00000504193 276 ntBASIC4.54□□□□□ -1.68
SMARCA4P51532 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC4.54□□□□□ -1.68
SMARCA4P51532 AP000867.2-201ENST00000532468 320 ntBASIC4.54□□□□□ -1.68
SMARCA4P51532 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC4.54□□□□□ -1.68
SMARCA4P51532 AL031985.3-201ENST00000565390 2449 ntBASIC4.53□□□□□ -1.68
SMARCA4P51532 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
SMARCA4P51532 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
SMARCA4P51532 ANKRD20A9P-201ENST00000457997 2978 ntBASIC4.53□□□□□ -1.68
SMARCA4P51532 Y_RNA.238-201ENST00000364441 102 ntBASIC4.53□□□□□ -1.68
SMARCA4P51532 CYCSP45-201ENST00000402289 315 ntBASIC4.53□□□□□ -1.68
SMARCA4P51532 AL450263.2-201ENST00000439400 589 ntBASIC4.53□□□□□ -1.68
SMARCA4P51532 IGLVIV-53-201ENST00000520107 367 ntBASIC4.53□□□□□ -1.68
SMARCA4P51532 OR8L1P-201ENST00000534005 955 ntBASIC4.53□□□□□ -1.68
SMARCA4P51532 TRAV37-201ENST00000553906 342 ntBASIC4.53□□□□□ -1.68
SMARCA4P51532 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SMARCA4P51532 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC4.53□□□□□ -1.68
SMARCA4P51532 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC4.53□□□□□ -1.68
SMARCA4P51532 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SMARCA4P51532 RNU6-76P-201ENST00000384060 104 ntBASIC4.52□□□□□ -1.69
SMARCA4P51532 HMGB1P25-201ENST00000468402 607 ntBASIC4.52□□□□□ -1.69
SMARCA4P51532 RNU6ATAC39P-201ENST00000516309 149 ntBASIC4.52□□□□□ -1.69
SMARCA4P51532 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC4.52□□□□□ -1.69
SMARCA4P51532 NTAN1P1-201ENST00000603150 646 ntBASIC4.52□□□□□ -1.69
SMARCA4P51532 AC068313.1-201ENST00000604028 1008 ntBASIC4.52□□□□□ -1.69
SMARCA4P51532 WARS-244ENST00000627608 123 ntTSL 5 BASIC4.52□□□□□ -1.69
SMARCA4P51532 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC4.52□□□□□ -1.69
SMARCA4P51532 RNA5SP99-201ENST00000364020 114 ntBASIC4.51□□□□□ -1.69
SMARCA4P51532 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
SMARCA4P51532 AL592437.1-201ENST00000443781 492 ntBASIC4.51□□□□□ -1.69
SMARCA4P51532 AC125238.1-201ENST00000448842 249 ntBASIC4.51□□□□□ -1.69
SMARCA4P51532 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC4.51□□□□□ -1.69
SMARCA4P51532 MIR7111-201ENST00000619751 72 ntBASIC4.51□□□□□ -1.69
SMARCA4P51532 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
SMARCA4P51532 ZNF72P-201ENST00000425869 1908 ntBASIC4.51□□□□□ -1.69
SMARCA4P51532 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
SMARCA4P51532 PARD3-204ENST00000374768 799 ntTSL 3 BASIC4.5□□□□□ -1.69
SMARCA4P51532 AC096638.1-201ENST00000444678 216 ntBASIC4.5□□□□□ -1.69
SMARCA4P51532 AL353705.4-201ENST00000449661 238 ntBASIC4.5□□□□□ -1.69
SMARCA4P51532 AC008280.2-201ENST00000455473 307 ntBASIC4.5□□□□□ -1.69
SMARCA4P51532 AL133271.1-201ENST00000538229 291 ntBASIC4.5□□□□□ -1.69
SMARCA4P51532 CRYM-AS1-204ENST00000637983 556 ntBASIC4.5□□□□□ -1.69
SMARCA4P51532 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC4.5□□□□□ -1.69
SMARCA4P51532 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SMARCA4P51532 TRGV5P-201ENST00000419915 354 ntBASIC4.5□□□□□ -1.69
SMARCA4P51532 AL590399.6-201ENST00000446396 307 ntBASIC4.5□□□□□ -1.69
SMARCA4P51532 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC4.5□□□□□ -1.69
SMARCA4P51532 AC083760.1-201ENST00000589621 670 ntBASIC4.5□□□□□ -1.69
SMARCA4P51532 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC4.5□□□□□ -1.69
SMARCA4P51532 XPOTP1-201ENST00000443317 2398 ntBASIC4.49□□□□□ -1.69
SMARCA4P51532 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
SMARCA4P51532 RPL21P132-201ENST00000331267 462 ntBASIC4.49□□□□□ -1.69
SMARCA4P51532 RNU1-100P-201ENST00000365255 165 ntBASIC4.49□□□□□ -1.69
SMARCA4P51532 SNORA70E-201ENST00000384492 135 ntBASIC4.49□□□□□ -1.69
SMARCA4P51532 MIR708-201ENST00000390708 88 ntBASIC4.49□□□□□ -1.69
SMARCA4P51532 AC118282.1-201ENST00000506408 765 ntBASIC4.49□□□□□ -1.69
SMARCA4P51532 AC092436.1-201ENST00000506450 503 ntBASIC4.49□□□□□ -1.69
SMARCA4P51532 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC4.49□□□□□ -1.69
SMARCA4P51532 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SMARCA4P51532 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
SMARCA4P51532 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
SMARCA4P51532 AC069218.2-201ENST00000411665 344 ntBASIC4.48□□□□□ -1.69
SMARCA4P51532 DPH3P2-201ENST00000422618 250 ntBASIC4.48□□□□□ -1.69
SMARCA4P51532 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC4.48□□□□□ -1.69
SMARCA4P51532 RPL30P9-201ENST00000465586 330 ntBASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms