Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC3.51□□□□□ -1.85
NKX2-1P43699 AC023141.12-201ENST00000512399 199 ntBASIC3.51□□□□□ -1.85
NKX2-1P43699 AC022861.1-201ENST00000522981 663 ntBASIC3.51□□□□□ -1.85
NKX2-1P43699 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC3.51□□□□□ -1.85
NKX2-1P43699 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.51□□□□□ -1.85
NKX2-1P43699 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC3.51□□□□□ -1.85
NKX2-1P43699 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC3.51□□□□□ -1.85
NKX2-1P43699 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.51□□□□□ -1.85
NKX2-1P43699 AC053481.3-201ENST00000577881 843 ntBASIC3.51□□□□□ -1.85
NKX2-1P43699 MIR3915-201ENST00000578518 97 ntBASIC3.51□□□□□ -1.85
NKX2-1P43699 AC245008.1-201ENST00000608123 476 ntBASIC3.51□□□□□ -1.85
NKX2-1P43699 AC006329.2-201ENST00000611491 394 ntBASIC3.51□□□□□ -1.85
NKX2-1P43699 MIR7844-201ENST00000616161 122 ntBASIC3.51□□□□□ -1.85
NKX2-1P43699 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.51□□□□□ -1.85
NKX2-1P43699 MIR6853-201ENST00000619642 74 ntBASIC3.51□□□□□ -1.85
NKX2-1P43699 MIR6719-201ENST00000622428 87 ntBASIC3.51□□□□□ -1.85
NKX2-1P43699 AL359715.5-201ENST00000623431 443 ntBASIC3.51□□□□□ -1.85
NKX2-1P43699 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC3.51□□□□□ -1.85
NKX2-1P43699 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.51□□□□□ -1.85
NKX2-1P43699 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
NKX2-1P43699 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
NKX2-1P43699 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
NKX2-1P43699 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
NKX2-1P43699 AC010300.1-201ENST00000600671 5134 ntBASIC3.51□□□□□ -1.85
NKX2-1P43699 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC3.51□□□□□ -1.85
NKX2-1P43699 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
NKX2-1P43699 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
NKX2-1P43699 AC116096.1-201ENST00000566804 2314 ntBASIC3.5□□□□□ -1.85
NKX2-1P43699 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC3.5□□□□□ -1.85
NKX2-1P43699 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
NKX2-1P43699 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
NKX2-1P43699 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
NKX2-1P43699 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
NKX2-1P43699 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
NKX2-1P43699 MIR3074-201ENST00000384885 81 ntBASIC3.5□□□□□ -1.85
NKX2-1P43699 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.5□□□□□ -1.85
NKX2-1P43699 AL109941.1-201ENST00000401925 229 ntBASIC3.5□□□□□ -1.85
NKX2-1P43699 MIR1302-8-201ENST00000408342 128 ntBASIC3.5□□□□□ -1.85
NKX2-1P43699 RN7SKP100-201ENST00000411258 284 ntBASIC3.5□□□□□ -1.85
NKX2-1P43699 EIF1P3-201ENST00000423841 334 ntBASIC3.5□□□□□ -1.85
NKX2-1P43699 AL512649.1-201ENST00000428997 581 ntBASIC3.5□□□□□ -1.85
NKX2-1P43699 AC244035.1-201ENST00000430042 390 ntBASIC3.5□□□□□ -1.85
NKX2-1P43699 CCNB1IP1P2-201ENST00000432876 818 ntBASIC3.5□□□□□ -1.85
NKX2-1P43699 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC3.5□□□□□ -1.85
NKX2-1P43699 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.5□□□□□ -1.85
NKX2-1P43699 UBE2FP3-201ENST00000436366 524 ntBASIC3.5□□□□□ -1.85
NKX2-1P43699 PSMD10P3-201ENST00000437000 448 ntBASIC3.5□□□□□ -1.85
NKX2-1P43699 AC005154.2-201ENST00000438110 379 ntBASIC3.5□□□□□ -1.85
NKX2-1P43699 MUPP-201ENST00000438111 566 ntBASIC3.5□□□□□ -1.85
NKX2-1P43699 HSPE1P28-201ENST00000443139 211 ntBASIC3.5□□□□□ -1.85
NKX2-1P43699 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.5□□□□□ -1.85
NKX2-1P43699 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC3.5□□□□□ -1.85
NKX2-1P43699 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC3.5□□□□□ -1.85
NKX2-1P43699 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
NKX2-1P43699 RAD23BP3-201ENST00000454157 1152 ntBASIC3.5□□□□□ -1.85
NKX2-1P43699 AC091685.2-201ENST00000454924 864 ntBASIC3.5□□□□□ -1.85
NKX2-1P43699 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC3.5□□□□□ -1.85
NKX2-1P43699 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.5□□□□□ -1.85
NKX2-1P43699 AC063943.1-201ENST00000465434 453 ntBASIC3.5□□□□□ -1.85
NKX2-1P43699 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC3.5□□□□□ -1.85
NKX2-1P43699 RAP1BP2-201ENST00000478270 544 ntBASIC3.5□□□□□ -1.85
NKX2-1P43699 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.5□□□□□ -1.85
NKX2-1P43699 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC3.5□□□□□ -1.85
NKX2-1P43699 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.5□□□□□ -1.85
NKX2-1P43699 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC3.5□□□□□ -1.85
NKX2-1P43699 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.5□□□□□ -1.85
NKX2-1P43699 AC093853.1-201ENST00000515689 483 ntBASIC3.5□□□□□ -1.85
NKX2-1P43699 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.5□□□□□ -1.85
NKX2-1P43699 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC3.5□□□□□ -1.85
NKX2-1P43699 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.5□□□□□ -1.85
NKX2-1P43699 IGHV3-32-201ENST00000519182 355 ntBASIC3.5□□□□□ -1.85
NKX2-1P43699 IGKV1-32-201ENST00000519290 311 ntBASIC3.5□□□□□ -1.85
NKX2-1P43699 AC090281.1-201ENST00000523019 276 ntBASIC3.5□□□□□ -1.85
NKX2-1P43699 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC3.5□□□□□ -1.85
NKX2-1P43699 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
NKX2-1P43699 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
NKX2-1P43699 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC3.5□□□□□ -1.85
NKX2-1P43699 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.5□□□□□ -1.85
NKX2-1P43699 AC107016.1-201ENST00000550463 337 ntBASIC3.5□□□□□ -1.85
NKX2-1P43699 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC3.5□□□□□ -1.85
NKX2-1P43699 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC3.5□□□□□ -1.85
NKX2-1P43699 AC007424.1-203ENST00000554613 687 ntBASIC3.5□□□□□ -1.85
NKX2-1P43699 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC3.5□□□□□ -1.85
NKX2-1P43699 AC012182.1-201ENST00000570133 895 ntBASIC3.5□□□□□ -1.85
NKX2-1P43699 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC3.5□□□□□ -1.85
NKX2-1P43699 MIR3934-201ENST00000579806 107 ntBASIC3.5□□□□□ -1.85
NKX2-1P43699 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC3.5□□□□□ -1.85
NKX2-1P43699 MAGOH2P-202ENST00000584384 429 ntBASIC3.5□□□□□ -1.85
NKX2-1P43699 AC006539.2-201ENST00000601729 572 ntBASIC3.5□□□□□ -1.85
NKX2-1P43699 AL163642.2-201ENST00000604722 1019 ntBASIC3.5□□□□□ -1.85
NKX2-1P43699 AC090510.2-201ENST00000617465 629 ntBASIC3.5□□□□□ -1.85
NKX2-1P43699 PACRG-211ENST00000621363 360 ntTSL 5 BASIC3.5□□□□□ -1.85
NKX2-1P43699 AC006927.3-201ENST00000638789 384 ntBASIC3.5□□□□□ -1.85
NKX2-1P43699 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
NKX2-1P43699 Z82217.1-201ENST00000625157 8149 ntBASIC3.5□□□□□ -1.85
NKX2-1P43699 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.5□□□□□ -1.85
NKX2-1P43699 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC3.49□□□□□ -1.85
NKX2-1P43699 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.49□□□□□ -1.85
NKX2-1P43699 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.49□□□□□ -1.85
NKX2-1P43699 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms