Protein–RNA interactions for Protein: P43489

TNFRSF4, Tumor necrosis factor receptor superfamily member 4, humanhuman

Predictions only

Length 277 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4P43489 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC3.63□□□□□ -1.83
TNFRSF4P43489 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC3.63□□□□□ -1.83
TNFRSF4P43489 RNU6-415P-201ENST00000516252 97 ntBASIC3.63□□□□□ -1.83
TNFRSF4P43489 IGKV2D-36-201ENST00000518643 226 ntBASIC3.63□□□□□ -1.83
TNFRSF4P43489 AC010376.1-201ENST00000522101 334 ntBASIC3.63□□□□□ -1.83
TNFRSF4P43489 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.63□□□□□ -1.83
TNFRSF4P43489 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
TNFRSF4P43489 LRRC6P1-201ENST00000532188 885 ntBASIC3.63□□□□□ -1.83
TNFRSF4P43489 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC3.63□□□□□ -1.83
TNFRSF4P43489 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC3.63□□□□□ -1.83
TNFRSF4P43489 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC3.63□□□□□ -1.83
TNFRSF4P43489 AC037471.2-201ENST00000564941 598 ntBASIC3.63□□□□□ -1.83
TNFRSF4P43489 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC3.63□□□□□ -1.83
TNFRSF4P43489 SNORD39.3-201ENST00000584451 71 ntBASIC3.63□□□□□ -1.83
TNFRSF4P43489 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.63□□□□□ -1.83
TNFRSF4P43489 AC113368.1-201ENST00000603736 382 ntBASIC3.63□□□□□ -1.83
TNFRSF4P43489 AC073387.2-201ENST00000604797 784 ntBASIC3.63□□□□□ -1.83
TNFRSF4P43489 HMGN2P28-201ENST00000606102 262 ntBASIC3.63□□□□□ -1.83
TNFRSF4P43489 AL121652.1-201ENST00000608851 448 ntBASIC3.63□□□□□ -1.83
TNFRSF4P43489 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC3.63□□□□□ -1.83
TNFRSF4P43489 ALG13-230ENST00000623189 458 ntTSL 3 BASIC3.63□□□□□ -1.83
TNFRSF4P43489 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.63□□□□□ -1.83
TNFRSF4P43489 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
TNFRSF4P43489 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
TNFRSF4P43489 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.62□□□□□ -1.83
TNFRSF4P43489 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
TNFRSF4P43489 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.62□□□□□ -1.83
TNFRSF4P43489 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC3.62□□□□□ -1.83
TNFRSF4P43489 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
TNFRSF4P43489 AC032011.1-201ENST00000611703 1549 ntBASIC3.62□□□□□ -1.83
TNFRSF4P43489 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
TNFRSF4P43489 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
TNFRSF4P43489 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
TNFRSF4P43489 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
TNFRSF4P43489 AL023807.1-201ENST00000407932 359 ntBASIC3.62□□□□□ -1.83
TNFRSF4P43489 RNA5SP120-201ENST00000410900 112 ntBASIC3.62□□□□□ -1.83
TNFRSF4P43489 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.62□□□□□ -1.83
TNFRSF4P43489 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.62□□□□□ -1.83
TNFRSF4P43489 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC3.62□□□□□ -1.83
TNFRSF4P43489 BX510359.1-201ENST00000456973 237 ntBASIC3.62□□□□□ -1.83
TNFRSF4P43489 AC010301.1-201ENST00000473936 355 ntBASIC3.62□□□□□ -1.83
TNFRSF4P43489 AC104982.1-201ENST00000478775 574 ntBASIC3.62□□□□□ -1.83
TNFRSF4P43489 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
TNFRSF4P43489 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC3.62□□□□□ -1.83
TNFRSF4P43489 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
TNFRSF4P43489 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.62□□□□□ -1.83
TNFRSF4P43489 RNU6-579P-201ENST00000516879 102 ntBASIC3.62□□□□□ -1.83
TNFRSF4P43489 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC3.62□□□□□ -1.83
TNFRSF4P43489 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.62□□□□□ -1.83
TNFRSF4P43489 AC118942.1-201ENST00000529674 1035 ntBASIC3.62□□□□□ -1.83
TNFRSF4P43489 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
TNFRSF4P43489 AC092747.2-201ENST00000545069 983 ntBASIC3.62□□□□□ -1.83
TNFRSF4P43489 AC023161.2-201ENST00000551218 780 ntBASIC3.62□□□□□ -1.83
TNFRSF4P43489 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.62□□□□□ -1.83
TNFRSF4P43489 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.62□□□□□ -1.83
TNFRSF4P43489 AC090616.5-202ENST00000582111 297 ntBASIC3.62□□□□□ -1.83
TNFRSF4P43489 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.62□□□□□ -1.83
TNFRSF4P43489 AL445435.1-201ENST00000604232 665 ntBASIC3.62□□□□□ -1.83
TNFRSF4P43489 IGHV3-29-201ENST00000604817 344 ntBASIC3.62□□□□□ -1.83
TNFRSF4P43489 AC004825.2-201ENST00000616634 455 ntBASIC3.62□□□□□ -1.83
TNFRSF4P43489 AL713922.2-201ENST00000619384 716 ntBASIC3.62□□□□□ -1.83
TNFRSF4P43489 AC091905.1-201ENST00000624400 311 ntBASIC3.62□□□□□ -1.83
TNFRSF4P43489 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC3.62□□□□□ -1.83
TNFRSF4P43489 MIR3651-201ENST00000630427 90 ntBASIC3.62□□□□□ -1.83
TNFRSF4P43489 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC3.62□□□□□ -1.83
TNFRSF4P43489 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
TNFRSF4P43489 AL645568.2-201ENST00000432815 1337 ntBASIC3.62□□□□□ -1.83
TNFRSF4P43489 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
TNFRSF4P43489 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
TNFRSF4P43489 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
TNFRSF4P43489 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
TNFRSF4P43489 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
TNFRSF4P43489 RNVU1-3-201ENST00000364313 161 ntBASIC3.61□□□□□ -1.83
TNFRSF4P43489 SNORA72.3-201ENST00000365074 132 ntBASIC3.61□□□□□ -1.83
TNFRSF4P43489 MIR217-201ENST00000384817 110 ntBASIC3.61□□□□□ -1.83
TNFRSF4P43489 DBIP2-201ENST00000419076 262 ntBASIC3.61□□□□□ -1.83
TNFRSF4P43489 OFD1P18Y-201ENST00000420889 959 ntBASIC3.61□□□□□ -1.83
TNFRSF4P43489 AL391219.1-201ENST00000422570 483 ntBASIC3.61□□□□□ -1.83
TNFRSF4P43489 SDCBPP2-201ENST00000424643 885 ntBASIC3.61□□□□□ -1.83
TNFRSF4P43489 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC3.61□□□□□ -1.83
TNFRSF4P43489 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
TNFRSF4P43489 AC005345.1-201ENST00000431868 217 ntBASIC3.61□□□□□ -1.83
TNFRSF4P43489 RPL23AP16-201ENST00000441715 421 ntBASIC3.61□□□□□ -1.83
TNFRSF4P43489 HMGB1P16-201ENST00000447155 540 ntBASIC3.61□□□□□ -1.83
TNFRSF4P43489 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.61□□□□□ -1.83
TNFRSF4P43489 AC104073.1-201ENST00000451988 151 ntBASIC3.61□□□□□ -1.83
TNFRSF4P43489 TVP23BP2-201ENST00000455082 615 ntBASIC3.61□□□□□ -1.83
TNFRSF4P43489 TRBV26-201ENST00000456572 344 ntBASIC3.61□□□□□ -1.83
TNFRSF4P43489 MTCO3P2-201ENST00000457365 171 ntBASIC3.61□□□□□ -1.83
TNFRSF4P43489 U3.44-201ENST00000458938 192 ntBASIC3.61□□□□□ -1.83
TNFRSF4P43489 AC008155.2-201ENST00000464337 397 ntBASIC3.61□□□□□ -1.83
TNFRSF4P43489 AC023598.1-201ENST00000472521 361 ntBASIC3.61□□□□□ -1.83
TNFRSF4P43489 AC022795.1-201ENST00000473808 480 ntBASIC3.61□□□□□ -1.83
TNFRSF4P43489 AC025445.1-201ENST00000502728 300 ntBASIC3.61□□□□□ -1.83
TNFRSF4P43489 RNU2-27P-201ENST00000516185 142 ntBASIC3.61□□□□□ -1.83
TNFRSF4P43489 RNA5SP154-201ENST00000516193 111 ntBASIC3.61□□□□□ -1.83
TNFRSF4P43489 RN7SKP116-201ENST00000516902 319 ntBASIC3.61□□□□□ -1.83
TNFRSF4P43489 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC3.61□□□□□ -1.83
TNFRSF4P43489 AP000926.4-201ENST00000527351 454 ntBASIC3.61□□□□□ -1.83
TNFRSF4P43489 AP000790.1-201ENST00000528891 737 ntBASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 162.1 ms