Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 AC008725.1-201ENST00000605123 2263 ntBASIC3.35□□□□□ -1.87
TNFSF9P41273 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.35□□□□□ -1.87
TNFSF9P41273 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.87
TNFSF9P41273 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
TNFSF9P41273 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
TNFSF9P41273 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
TNFSF9P41273 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
TNFSF9P41273 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
TNFSF9P41273 AC016716.1-201ENST00000265882 708 ntBASIC3.34□□□□□ -1.87
TNFSF9P41273 SNORD51.1-201ENST00000365405 77 ntBASIC3.34□□□□□ -1.87
TNFSF9P41273 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
TNFSF9P41273 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
TNFSF9P41273 UBA52P6-201ENST00000399822 382 ntBASIC3.34□□□□□ -1.87
TNFSF9P41273 AL355379.1-201ENST00000405542 640 ntBASIC3.34□□□□□ -1.87
TNFSF9P41273 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.34□□□□□ -1.87
TNFSF9P41273 MRPL35P4-201ENST00000453682 566 ntBASIC3.34□□□□□ -1.87
TNFSF9P41273 AC006539.3-201ENST00000454258 129 ntBASIC3.34□□□□□ -1.87
TNFSF9P41273 NCOR1P1-202ENST00000486162 291 ntBASIC3.34□□□□□ -1.87
TNFSF9P41273 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.34□□□□□ -1.87
TNFSF9P41273 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC3.34□□□□□ -1.87
TNFSF9P41273 AC119751.5-201ENST00000514077 770 ntBASIC3.34□□□□□ -1.87
TNFSF9P41273 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.34□□□□□ -1.87
TNFSF9P41273 RNA5SP217-201ENST00000515959 91 ntBASIC3.34□□□□□ -1.87
TNFSF9P41273 SNORA70.14-201ENST00000516205 110 ntBASIC3.34□□□□□ -1.87
TNFSF9P41273 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC3.34□□□□□ -1.87
TNFSF9P41273 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC3.34□□□□□ -1.87
TNFSF9P41273 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC3.34□□□□□ -1.87
TNFSF9P41273 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC3.34□□□□□ -1.87
TNFSF9P41273 AC007687.1-201ENST00000602704 304 ntBASIC3.34□□□□□ -1.87
TNFSF9P41273 AL137843.1-201ENST00000605078 385 ntBASIC3.34□□□□□ -1.87
TNFSF9P41273 AL591516.1-201ENST00000611326 274 ntBASIC3.34□□□□□ -1.87
TNFSF9P41273 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC3.34□□□□□ -1.87
TNFSF9P41273 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC3.34□□□□□ -1.87
TNFSF9P41273 MIR622-201ENST00000638396 96 ntBASIC3.34□□□□□ -1.87
TNFSF9P41273 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
TNFSF9P41273 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.34□□□□□ -1.88
TNFSF9P41273 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.34□□□□□ -1.88
TNFSF9P41273 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
TNFSF9P41273 RPL23AP57-201ENST00000332361 466 ntBASIC3.33□□□□□ -1.88
TNFSF9P41273 AC073325.2-201ENST00000339545 159 ntBASIC3.33□□□□□ -1.88
TNFSF9P41273 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
TNFSF9P41273 AL356057.1-202ENST00000402263 756 ntBASIC3.33□□□□□ -1.88
TNFSF9P41273 ARL2BPP3-201ENST00000421226 480 ntBASIC3.33□□□□□ -1.88
TNFSF9P41273 CR848007.2-201ENST00000424918 787 ntBASIC3.33□□□□□ -1.88
TNFSF9P41273 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.33□□□□□ -1.88
TNFSF9P41273 AL831737.1-201ENST00000441288 271 ntBASIC3.33□□□□□ -1.88
TNFSF9P41273 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.33□□□□□ -1.88
TNFSF9P41273 AC068135.1-201ENST00000446164 246 ntBASIC3.33□□□□□ -1.88
TNFSF9P41273 RPL23AP15-201ENST00000450202 459 ntBASIC3.33□□□□□ -1.88
TNFSF9P41273 RPL23AP23-201ENST00000452590 471 ntBASIC3.33□□□□□ -1.88
TNFSF9P41273 CABYRP1-201ENST00000465493 1045 ntBASIC3.33□□□□□ -1.88
TNFSF9P41273 TMED11P-201ENST00000479478 690 ntBASIC3.33□□□□□ -1.88
TNFSF9P41273 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC3.33□□□□□ -1.88
TNFSF9P41273 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC3.33□□□□□ -1.88
TNFSF9P41273 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC3.33□□□□□ -1.88
TNFSF9P41273 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC3.33□□□□□ -1.88
TNFSF9P41273 HIGD1AP3-201ENST00000515857 278 ntBASIC3.33□□□□□ -1.88
TNFSF9P41273 AC009812.2-201ENST00000517657 457 ntBASIC3.33□□□□□ -1.88
TNFSF9P41273 AC104115.2-201ENST00000523026 687 ntBASIC3.33□□□□□ -1.88
TNFSF9P41273 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.33□□□□□ -1.88
TNFSF9P41273 PSMA2P1-201ENST00000526365 646 ntBASIC3.33□□□□□ -1.88
TNFSF9P41273 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
TNFSF9P41273 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.33□□□□□ -1.88
TNFSF9P41273 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
TNFSF9P41273 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.33□□□□□ -1.88
TNFSF9P41273 MIR4644-201ENST00000579929 84 ntBASIC3.33□□□□□ -1.88
TNFSF9P41273 AC090312.2-201ENST00000582687 378 ntBASIC3.33□□□□□ -1.88
TNFSF9P41273 AC010928.3-201ENST00000587712 541 ntBASIC3.33□□□□□ -1.88
TNFSF9P41273 AL451007.1-201ENST00000595491 289 ntBASIC3.33□□□□□ -1.88
TNFSF9P41273 AC018754.1-201ENST00000607486 925 ntBASIC3.33□□□□□ -1.88
TNFSF9P41273 AL162574.2-201ENST00000614618 657 ntBASIC3.33□□□□□ -1.88
TNFSF9P41273 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.33□□□□□ -1.88
TNFSF9P41273 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.33□□□□□ -1.88
TNFSF9P41273 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.33□□□□□ -1.88
TNFSF9P41273 AC104446.1-201ENST00000613728 1321 ntBASIC3.33□□□□□ -1.88
TNFSF9P41273 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.33□□□□□ -1.88
TNFSF9P41273 NSRP1P1-201ENST00000444067 1693 ntBASIC3.33□□□□□ -1.88
TNFSF9P41273 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
TNFSF9P41273 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.33□□□□□ -1.88
TNFSF9P41273 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.33□□□□□ -1.88
TNFSF9P41273 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.32□□□□□ -1.88
TNFSF9P41273 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
TNFSF9P41273 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
TNFSF9P41273 RNU6-883P-201ENST00000384597 107 ntBASIC3.32□□□□□ -1.88
TNFSF9P41273 U3.26-201ENST00000391236 204 ntBASIC3.32□□□□□ -1.88
TNFSF9P41273 RN7SKP220-201ENST00000410611 288 ntBASIC3.32□□□□□ -1.88
TNFSF9P41273 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.32□□□□□ -1.88
TNFSF9P41273 GTF2IP23-201ENST00000423746 351 ntBASIC3.32□□□□□ -1.88
TNFSF9P41273 AC004865.1-201ENST00000442276 1003 ntBASIC3.32□□□□□ -1.88
TNFSF9P41273 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC3.32□□□□□ -1.88
TNFSF9P41273 AL590399.6-201ENST00000446396 307 ntBASIC3.32□□□□□ -1.88
TNFSF9P41273 NPM1P49-201ENST00000448027 714 ntBASIC3.32□□□□□ -1.88
TNFSF9P41273 RSL24D1P3-201ENST00000449255 495 ntBASIC3.32□□□□□ -1.88
TNFSF9P41273 MTND5P8-201ENST00000449817 1083 ntBASIC3.32□□□□□ -1.88
TNFSF9P41273 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.32□□□□□ -1.88
TNFSF9P41273 MTND2P6-201ENST00000455337 1030 ntBASIC3.32□□□□□ -1.88
TNFSF9P41273 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC3.32□□□□□ -1.88
TNFSF9P41273 RN7SL20P-201ENST00000488827 297 ntBASIC3.32□□□□□ -1.88
TNFSF9P41273 AC068305.1-201ENST00000497406 726 ntBASIC3.32□□□□□ -1.88
TNFSF9P41273 AC078918.1-201ENST00000498515 228 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 129.2 ms