Protein–RNA interactions for Protein: P39023

RPL3, 60S ribosomal protein L3, humanhuman

Known RBP Predictions only

Length 403 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL3P39023 AC015908.5-201ENST00000623289 343 ntBASIC3.96□□□□□ -1.78
RPL3P39023 LINC02471-203ENST00000641941 4752 ntBASIC3.96□□□□□ -1.78
RPL3P39023 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
RPL3P39023 MTND4P5-201ENST00000435821 1374 ntBASIC3.96□□□□□ -1.78
RPL3P39023 MTND4P16-201ENST00000466108 1367 ntBASIC3.96□□□□□ -1.78
RPL3P39023 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.96□□□□□ -1.78
RPL3P39023 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
RPL3P39023 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC3.96□□□□□ -1.78
RPL3P39023 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
RPL3P39023 ERCC6-202ENST00000374127 1782 ntBASIC3.96□□□□□ -1.78
RPL3P39023 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
RPL3P39023 AC090971.4-201ENST00000560291 1800 ntBASIC3.95□□□□□ -1.78
RPL3P39023 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC3.95□□□□□ -1.78
RPL3P39023 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
RPL3P39023 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
RPL3P39023 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.95□□□□□ -1.78
RPL3P39023 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
RPL3P39023 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
RPL3P39023 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
RPL3P39023 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC3.95□□□□□ -1.78
RPL3P39023 RNU6-462P-201ENST00000362659 105 ntBASIC3.95□□□□□ -1.78
RPL3P39023 RNA5SP513-201ENST00000364648 118 ntBASIC3.95□□□□□ -1.78
RPL3P39023 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
RPL3P39023 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
RPL3P39023 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
RPL3P39023 OR5H15-201ENST00000383696 930 ntBASIC3.95□□□□□ -1.78
RPL3P39023 EIF5P1-201ENST00000400019 1231 ntBASIC3.95□□□□□ -1.78
RPL3P39023 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.95□□□□□ -1.78
RPL3P39023 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
RPL3P39023 AL512430.2-201ENST00000406786 339 ntBASIC3.95□□□□□ -1.78
RPL3P39023 SNORA3C-201ENST00000408792 125 ntBASIC3.95□□□□□ -1.78
RPL3P39023 METTL5-204ENST00000409340 472 ntTSL 5 BASIC3.95□□□□□ -1.78
RPL3P39023 PGBD4P8-201ENST00000412993 562 ntBASIC3.95□□□□□ -1.78
RPL3P39023 AL512649.1-201ENST00000428997 581 ntBASIC3.95□□□□□ -1.78
RPL3P39023 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC3.95□□□□□ -1.78
RPL3P39023 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC3.95□□□□□ -1.78
RPL3P39023 RPS24P1-201ENST00000438550 371 ntBASIC3.95□□□□□ -1.78
RPL3P39023 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC3.95□□□□□ -1.78
RPL3P39023 RPL23AP16-201ENST00000441715 421 ntBASIC3.95□□□□□ -1.78
RPL3P39023 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC3.95□□□□□ -1.78
RPL3P39023 USP9YP29-201ENST00000445112 563 ntBASIC3.95□□□□□ -1.78
RPL3P39023 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.95□□□□□ -1.78
RPL3P39023 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC3.95□□□□□ -1.78
RPL3P39023 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC3.95□□□□□ -1.78
RPL3P39023 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC3.95□□□□□ -1.78
RPL3P39023 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC3.95□□□□□ -1.78
RPL3P39023 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC3.95□□□□□ -1.78
RPL3P39023 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC3.95□□□□□ -1.78
RPL3P39023 RNA5SP246-201ENST00000458909 119 ntBASIC3.95□□□□□ -1.78
RPL3P39023 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
RPL3P39023 RPL29P14-201ENST00000495837 428 ntBASIC3.95□□□□□ -1.78
RPL3P39023 TMEM251P1-201ENST00000503717 318 ntBASIC3.95□□□□□ -1.78
RPL3P39023 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.95□□□□□ -1.78
RPL3P39023 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC3.95□□□□□ -1.78
RPL3P39023 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC3.95□□□□□ -1.78
RPL3P39023 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC3.95□□□□□ -1.78
RPL3P39023 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC3.95□□□□□ -1.78
RPL3P39023 RNA5SP49-201ENST00000516450 115 ntBASIC3.95□□□□□ -1.78
RPL3P39023 RNA5SP519-201ENST00000516480 119 ntBASIC3.95□□□□□ -1.78
RPL3P39023 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC3.95□□□□□ -1.78
RPL3P39023 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC3.95□□□□□ -1.78
RPL3P39023 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC3.95□□□□□ -1.78
RPL3P39023 MIR4504-201ENST00000577413 92 ntBASIC3.95□□□□□ -1.78
RPL3P39023 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC3.95□□□□□ -1.78
RPL3P39023 MIR4637-201ENST00000582405 84 ntBASIC3.95□□□□□ -1.78
RPL3P39023 MIR4715-201ENST00000584117 79 ntBASIC3.95□□□□□ -1.78
RPL3P39023 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC3.95□□□□□ -1.78
RPL3P39023 AC128687.1-201ENST00000605304 619 ntBASIC3.95□□□□□ -1.78
RPL3P39023 RNU6-88P-201ENST00000606801 100 ntBASIC3.95□□□□□ -1.78
RPL3P39023 AC128687.2-201ENST00000609657 566 ntBASIC3.95□□□□□ -1.78
RPL3P39023 MIR4727-201ENST00000622232 55 ntBASIC3.95□□□□□ -1.78
RPL3P39023 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC3.95□□□□□ -1.78
RPL3P39023 U6.101-201ENST00000637707 76 ntBASIC3.95□□□□□ -1.78
RPL3P39023 AL133243.3-201ENST00000617415 3004 ntBASIC3.95□□□□□ -1.78
RPL3P39023 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
RPL3P39023 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC3.95□□□□□ -1.78
RPL3P39023 AL031985.3-201ENST00000565390 2449 ntBASIC3.95□□□□□ -1.78
RPL3P39023 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.95□□□□□ -1.78
RPL3P39023 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC3.95□□□□□ -1.78
RPL3P39023 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC3.95□□□□□ -1.78
RPL3P39023 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
RPL3P39023 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
RPL3P39023 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.95□□□□□ -1.78
RPL3P39023 AP002907.1-201ENST00000606361 1430 ntBASIC3.95□□□□□ -1.78
RPL3P39023 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
RPL3P39023 AC016588.2-201ENST00000632484 3021 ntBASIC3.95□□□□□ -1.78
RPL3P39023 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
RPL3P39023 AC012618.3-205ENST00000637896 1496 ntBASIC3.94□□□□□ -1.78
RPL3P39023 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
RPL3P39023 RNU6-777P-201ENST00000364265 104 ntBASIC3.94□□□□□ -1.78
RPL3P39023 RNU6-398P-201ENST00000384143 109 ntBASIC3.94□□□□□ -1.78
RPL3P39023 SNORA51.6-201ENST00000384151 125 ntBASIC3.94□□□□□ -1.78
RPL3P39023 RNU6-1226P-201ENST00000384317 107 ntBASIC3.94□□□□□ -1.78
RPL3P39023 RNU6-146P-201ENST00000384602 108 ntBASIC3.94□□□□□ -1.78
RPL3P39023 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
RPL3P39023 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
RPL3P39023 AL583835.1-201ENST00000399570 407 ntBASIC3.94□□□□□ -1.78
RPL3P39023 DHFRP6-201ENST00000401776 268 ntBASIC3.94□□□□□ -1.78
RPL3P39023 EIF4A1P3-201ENST00000411521 244 ntBASIC3.94□□□□□ -1.78
RPL3P39023 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 124.9 ms