Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.5□□□□□ -1.69
CIITAP33076 AC087359.1-201ENST00000508335 1740 ntBASIC4.5□□□□□ -1.69
CIITAP33076 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CIITAP33076 AL390237.1-201ENST00000404226 1415 ntBASIC4.5□□□□□ -1.69
CIITAP33076 RNU6-582P-201ENST00000362989 107 ntBASIC4.5□□□□□ -1.69
CIITAP33076 RNU5D-1-201ENST00000363299 116 ntBASIC4.5□□□□□ -1.69
CIITAP33076 RNA5SP391-201ENST00000363456 119 ntBASIC4.5□□□□□ -1.69
CIITAP33076 RNU6-1300P-201ENST00000391046 108 ntBASIC4.5□□□□□ -1.69
CIITAP33076 RPS3AP26-201ENST00000398259 784 ntBASIC4.5□□□□□ -1.69
CIITAP33076 MIR1251-201ENST00000408552 70 ntBASIC4.5□□□□□ -1.69
CIITAP33076 RNU6-628P-201ENST00000410675 107 ntBASIC4.5□□□□□ -1.69
CIITAP33076 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.5□□□□□ -1.69
CIITAP33076 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC4.5□□□□□ -1.69
CIITAP33076 TRBV24OR9-2-201ENST00000416632 435 ntBASIC4.5□□□□□ -1.69
CIITAP33076 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.5□□□□□ -1.69
CIITAP33076 AL022400.1-201ENST00000423946 935 ntBASIC4.5□□□□□ -1.69
CIITAP33076 AL050321.1-201ENST00000432363 400 ntBASIC4.5□□□□□ -1.69
CIITAP33076 AC098826.1-201ENST00000433943 471 ntBASIC4.5□□□□□ -1.69
CIITAP33076 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC4.5□□□□□ -1.69
CIITAP33076 PPIAP17-201ENST00000438507 471 ntBASIC4.5□□□□□ -1.69
CIITAP33076 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC4.5□□□□□ -1.69
CIITAP33076 NDUFS5P3-201ENST00000450668 321 ntBASIC4.5□□□□□ -1.69
CIITAP33076 FGF7P3-201ENST00000454645 303 ntBASIC4.5□□□□□ -1.69
CIITAP33076 NDUFAF4P3-201ENST00000456468 525 ntBASIC4.5□□□□□ -1.69
CIITAP33076 SETP11-201ENST00000473027 690 ntBASIC4.5□□□□□ -1.69
CIITAP33076 AC010460.1-201ENST00000507087 466 ntBASIC4.5□□□□□ -1.69
CIITAP33076 MTCYBP37-201ENST00000510642 1133 ntBASIC4.5□□□□□ -1.69
CIITAP33076 MTND5P13-201ENST00000513046 1079 ntBASIC4.5□□□□□ -1.69
CIITAP33076 RNA5SP179-201ENST00000517284 121 ntBASIC4.5□□□□□ -1.69
CIITAP33076 MYL12AP1-201ENST00000518490 515 ntBASIC4.5□□□□□ -1.69
CIITAP33076 AC087369.1-201ENST00000520775 996 ntBASIC4.5□□□□□ -1.69
CIITAP33076 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC4.5□□□□□ -1.69
CIITAP33076 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC4.5□□□□□ -1.69
CIITAP33076 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CIITAP33076 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC4.5□□□□□ -1.69
CIITAP33076 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.5□□□□□ -1.69
CIITAP33076 AKIRIN1P1-201ENST00000547384 544 ntBASIC4.5□□□□□ -1.69
CIITAP33076 RN7SL703P-201ENST00000578485 302 ntBASIC4.5□□□□□ -1.69
CIITAP33076 AC006539.2-201ENST00000601729 572 ntBASIC4.5□□□□□ -1.69
CIITAP33076 AL590229.1-201ENST00000603497 542 ntBASIC4.5□□□□□ -1.69
CIITAP33076 AC009220.3-201ENST00000604318 586 ntBASIC4.5□□□□□ -1.69
CIITAP33076 AL390816.3-201ENST00000604527 1066 ntBASIC4.5□□□□□ -1.69
CIITAP33076 AC091167.4-201ENST00000605079 184 ntBASIC4.5□□□□□ -1.69
CIITAP33076 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC4.5□□□□□ -1.69
CIITAP33076 AC008083.4-201ENST00000615076 444 ntBASIC4.5□□□□□ -1.69
CIITAP33076 MIR6875-201ENST00000617506 72 ntBASIC4.5□□□□□ -1.69
CIITAP33076 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CIITAP33076 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.5□□□□□ -1.69
CIITAP33076 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC4.5□□□□□ -1.69
CIITAP33076 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.5□□□□□ -1.69
CIITAP33076 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.5□□□□□ -1.69
CIITAP33076 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
CIITAP33076 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
CIITAP33076 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CIITAP33076 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
CIITAP33076 AC005539.1-201ENST00000443768 1479 ntBASIC4.49□□□□□ -1.69
CIITAP33076 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC4.49□□□□□ -1.69
CIITAP33076 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC4.49□□□□□ -1.69
CIITAP33076 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.49□□□□□ -1.69
CIITAP33076 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
CIITAP33076 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.49□□□□□ -1.69
CIITAP33076 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CIITAP33076 Y_RNA.311-201ENST00000365068 96 ntBASIC4.49□□□□□ -1.69
CIITAP33076 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CIITAP33076 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
CIITAP33076 Y_RNA.560-201ENST00000384689 102 ntBASIC4.49□□□□□ -1.69
CIITAP33076 AL031577.2-201ENST00000404133 280 ntBASIC4.49□□□□□ -1.69
CIITAP33076 AL138880.1-201ENST00000405824 642 ntBASIC4.49□□□□□ -1.69
CIITAP33076 RNU6-272P-201ENST00000411028 104 ntBASIC4.49□□□□□ -1.69
CIITAP33076 PIGPP2-201ENST00000411569 458 ntBASIC4.49□□□□□ -1.69
CIITAP33076 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC4.49□□□□□ -1.69
CIITAP33076 HSFY4P-201ENST00000415994 1181 ntBASIC4.49□□□□□ -1.69
CIITAP33076 NUP35P2-201ENST00000416748 943 ntBASIC4.49□□□□□ -1.69
CIITAP33076 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC4.49□□□□□ -1.69
CIITAP33076 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC4.49□□□□□ -1.69
CIITAP33076 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.49□□□□□ -1.69
CIITAP33076 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.49□□□□□ -1.69
CIITAP33076 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC4.49□□□□□ -1.69
CIITAP33076 AL360221.1-201ENST00000445989 335 ntBASIC4.49□□□□□ -1.69
CIITAP33076 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.49□□□□□ -1.69
CIITAP33076 SUN3-208ENST00000453192 801 ntTSL 5 BASIC4.49□□□□□ -1.69
CIITAP33076 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC4.49□□□□□ -1.69
CIITAP33076 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC4.49□□□□□ -1.69
CIITAP33076 ANK3-207ENST00000460468 677 ntTSL 3 BASIC4.49□□□□□ -1.69
CIITAP33076 RPS20P21-201ENST00000466859 343 ntBASIC4.49□□□□□ -1.69
CIITAP33076 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.49□□□□□ -1.69
CIITAP33076 NCOR1P1-202ENST00000486162 291 ntBASIC4.49□□□□□ -1.69
CIITAP33076 VN1R105P-201ENST00000486595 910 ntBASIC4.49□□□□□ -1.69
CIITAP33076 RPS4XP15-201ENST00000489210 795 ntBASIC4.49□□□□□ -1.69
CIITAP33076 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC4.49□□□□□ -1.69
CIITAP33076 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.49□□□□□ -1.69
CIITAP33076 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC4.49□□□□□ -1.69
CIITAP33076 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.49□□□□□ -1.69
CIITAP33076 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC4.49□□□□□ -1.69
CIITAP33076 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC4.49□□□□□ -1.69
CIITAP33076 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.49□□□□□ -1.69
CIITAP33076 RNU6-488P-201ENST00000515918 99 ntBASIC4.49□□□□□ -1.69
CIITAP33076 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC4.49□□□□□ -1.69
CIITAP33076 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
CIITAP33076 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 113.4 ms