Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
SHC1P29353 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
SHC1P29353 AC100871.1-201ENST00000507871 1456 ntBASIC3.48□□□□□ -1.85
SHC1P29353 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
SHC1P29353 ZNF542P-204ENST00000482727 1305 ntBASIC3.48□□□□□ -1.85
SHC1P29353 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
SHC1P29353 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.48□□□□□ -1.85
SHC1P29353 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.48□□□□□ -1.85
SHC1P29353 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
SHC1P29353 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.48□□□□□ -1.85
SHC1P29353 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
SHC1P29353 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
SHC1P29353 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
SHC1P29353 RNU6-1339P-201ENST00000363574 91 ntBASIC3.48□□□□□ -1.85
SHC1P29353 Y_RNA.436-201ENST00000384097 102 ntBASIC3.48□□□□□ -1.85
SHC1P29353 MIR30B-201ENST00000384850 88 ntBASIC3.48□□□□□ -1.85
SHC1P29353 MIR525-201ENST00000384978 85 ntBASIC3.48□□□□□ -1.85
SHC1P29353 MIR1303-201ENST00000408625 86 ntBASIC3.48□□□□□ -1.85
SHC1P29353 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC3.48□□□□□ -1.85
SHC1P29353 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.48□□□□□ -1.85
SHC1P29353 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC3.48□□□□□ -1.85
SHC1P29353 AC006960.1-201ENST00000419980 153 ntBASIC3.48□□□□□ -1.85
SHC1P29353 MTND4P20-201ENST00000424125 869 ntBASIC3.48□□□□□ -1.85
SHC1P29353 AC234781.2-201ENST00000426370 994 ntBASIC3.48□□□□□ -1.85
SHC1P29353 RPL7P2-201ENST00000427639 268 ntBASIC3.48□□□□□ -1.85
SHC1P29353 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.48□□□□□ -1.85
SHC1P29353 GTF2IP7-202ENST00000436677 309 ntBASIC3.48□□□□□ -1.85
SHC1P29353 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC3.48□□□□□ -1.85
SHC1P29353 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC3.48□□□□□ -1.85
SHC1P29353 HMGB1P48-201ENST00000446155 598 ntBASIC3.48□□□□□ -1.85
SHC1P29353 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC3.48□□□□□ -1.85
SHC1P29353 MTND1P29-201ENST00000448112 647 ntBASIC3.48□□□□□ -1.85
SHC1P29353 AC079776.3-201ENST00000450665 370 ntBASIC3.48□□□□□ -1.85
SHC1P29353 MTCO3P16-201ENST00000454456 754 ntBASIC3.48□□□□□ -1.85
SHC1P29353 MTCO3P20-201ENST00000454926 688 ntBASIC3.48□□□□□ -1.85
SHC1P29353 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
SHC1P29353 ANKRD26P4-201ENST00000455755 950 ntBASIC3.48□□□□□ -1.85
SHC1P29353 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC3.48□□□□□ -1.85
SHC1P29353 GAPDHP36-201ENST00000480688 918 ntBASIC3.48□□□□□ -1.85
SHC1P29353 AC073522.1-201ENST00000483312 377 ntBASIC3.48□□□□□ -1.85
SHC1P29353 RN7SL323P-201ENST00000494712 295 ntBASIC3.48□□□□□ -1.85
SHC1P29353 AC111193.1-201ENST00000504097 155 ntBASIC3.48□□□□□ -1.85
SHC1P29353 AC104090.1-201ENST00000506341 1171 ntBASIC3.48□□□□□ -1.85
SHC1P29353 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
SHC1P29353 OR5BM1P-201ENST00000512021 366 ntBASIC3.48□□□□□ -1.85
SHC1P29353 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.48□□□□□ -1.85
SHC1P29353 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC3.48□□□□□ -1.85
SHC1P29353 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC3.48□□□□□ -1.85
SHC1P29353 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC3.48□□□□□ -1.85
SHC1P29353 REXO2-218ENST00000544827 880 ntTSL 3 BASIC3.48□□□□□ -1.85
SHC1P29353 ELOCP32-201ENST00000548625 324 ntBASIC3.48□□□□□ -1.85
SHC1P29353 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.48□□□□□ -1.85
SHC1P29353 AL133457.1-201ENST00000564251 987 ntBASIC3.48□□□□□ -1.85
SHC1P29353 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC3.48□□□□□ -1.85
SHC1P29353 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.48□□□□□ -1.85
SHC1P29353 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.48□□□□□ -1.85
SHC1P29353 AL390816.3-201ENST00000604527 1066 ntBASIC3.48□□□□□ -1.85
SHC1P29353 AC106791.2-201ENST00000604680 391 ntBASIC3.48□□□□□ -1.85
SHC1P29353 AC011939.3-201ENST00000613686 466 ntBASIC3.48□□□□□ -1.85
SHC1P29353 AC090116.1-201ENST00000615679 446 ntBASIC3.48□□□□□ -1.85
SHC1P29353 AC092140.2-201ENST00000618027 521 ntBASIC3.48□□□□□ -1.85
SHC1P29353 AL139089.1-201ENST00000620372 975 ntBASIC3.48□□□□□ -1.85
SHC1P29353 AL354798.1-201ENST00000622505 329 ntBASIC3.48□□□□□ -1.85
SHC1P29353 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.48□□□□□ -1.85
SHC1P29353 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC3.48□□□□□ -1.85
SHC1P29353 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
SHC1P29353 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.48□□□□□ -1.85
SHC1P29353 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
SHC1P29353 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
SHC1P29353 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
SHC1P29353 RPS4XP5-202ENST00000449995 1334 ntBASIC3.47□□□□□ -1.85
SHC1P29353 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
SHC1P29353 SGO1P2-201ENST00000429458 1589 ntBASIC3.47□□□□□ -1.85
SHC1P29353 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC3.47□□□□□ -1.85
SHC1P29353 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
SHC1P29353 RNU6-560P-201ENST00000364007 108 ntBASIC3.47□□□□□ -1.85
SHC1P29353 RNA5SP97-201ENST00000365006 84 ntBASIC3.47□□□□□ -1.85
SHC1P29353 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.47□□□□□ -1.85
SHC1P29353 U1.1-201ENST00000384101 164 ntBASIC3.47□□□□□ -1.85
SHC1P29353 HLFP1-201ENST00000402375 499 ntBASIC3.47□□□□□ -1.85
SHC1P29353 RNU6-757P-201ENST00000410334 100 ntBASIC3.47□□□□□ -1.85
SHC1P29353 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.47□□□□□ -1.85
SHC1P29353 PAICSP7-201ENST00000419829 962 ntBASIC3.47□□□□□ -1.85
SHC1P29353 RPL21P109-201ENST00000422213 475 ntBASIC3.47□□□□□ -1.85
SHC1P29353 AL031736.2-201ENST00000426573 787 ntBASIC3.47□□□□□ -1.85
SHC1P29353 AL589823.1-201ENST00000429577 183 ntBASIC3.47□□□□□ -1.85
SHC1P29353 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC3.47□□□□□ -1.85
SHC1P29353 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
SHC1P29353 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC3.47□□□□□ -1.85
SHC1P29353 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC3.47□□□□□ -1.85
SHC1P29353 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.47□□□□□ -1.85
SHC1P29353 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC3.47□□□□□ -1.85
SHC1P29353 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC3.47□□□□□ -1.85
SHC1P29353 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC3.47□□□□□ -1.85
SHC1P29353 DNAJC19P1-201ENST00000455312 319 ntBASIC3.47□□□□□ -1.85
SHC1P29353 NDUFAF4P3-201ENST00000456468 525 ntBASIC3.47□□□□□ -1.85
SHC1P29353 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.47□□□□□ -1.85
SHC1P29353 RPL21P11-201ENST00000461458 483 ntBASIC3.47□□□□□ -1.85
SHC1P29353 AC108734.3-201ENST00000481241 1165 ntBASIC3.47□□□□□ -1.85
SHC1P29353 RPL30P11-201ENST00000495304 339 ntBASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms