Protein–RNA interactions for Protein: P28827

PTPRM, Receptor-type tyrosine-protein phosphatase mu, humanhuman

Predictions only

Length 1,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRMP28827 IGKV2D-23-201ENST00000518179 286 ntBASIC3.96□□□□□ -1.78
PTPRMP28827 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC3.96□□□□□ -1.78
PTPRMP28827 VN1R9P-201ENST00000614184 867 ntBASIC3.96□□□□□ -1.78
PTPRMP28827 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC3.96□□□□□ -1.78
PTPRMP28827 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
PTPRMP28827 AC107081.3-201ENST00000612715 2034 ntBASIC3.95□□□□□ -1.78
PTPRMP28827 RN7SKP58-201ENST00000411010 305 ntBASIC3.95□□□□□ -1.78
PTPRMP28827 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC3.95□□□□□ -1.78
PTPRMP28827 PTP4A1P5-201ENST00000420305 455 ntBASIC3.95□□□□□ -1.78
PTPRMP28827 RPS12P5-201ENST00000423449 371 ntBASIC3.95□□□□□ -1.78
PTPRMP28827 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.95□□□□□ -1.78
PTPRMP28827 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC3.95□□□□□ -1.78
PTPRMP28827 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC3.95□□□□□ -1.78
PTPRMP28827 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC3.95□□□□□ -1.78
PTPRMP28827 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC3.95□□□□□ -1.78
PTPRMP28827 AC091179.1-201ENST00000461606 579 ntBASIC3.95□□□□□ -1.78
PTPRMP28827 SRIP1-201ENST00000489235 288 ntBASIC3.95□□□□□ -1.78
PTPRMP28827 AP000926.3-201ENST00000497201 299 ntBASIC3.95□□□□□ -1.78
PTPRMP28827 AC018630.1-201ENST00000541376 925 ntBASIC3.95□□□□□ -1.78
PTPRMP28827 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC3.95□□□□□ -1.78
PTPRMP28827 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC3.95□□□□□ -1.78
PTPRMP28827 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC3.95□□□□□ -1.78
PTPRMP28827 MIR4781-201ENST00000585250 76 ntBASIC3.95□□□□□ -1.78
PTPRMP28827 AC079228.1-201ENST00000624774 1049 ntBASIC3.95□□□□□ -1.78
PTPRMP28827 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC3.95□□□□□ -1.78
PTPRMP28827 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
PTPRMP28827 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
PTPRMP28827 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
PTPRMP28827 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
PTPRMP28827 RNU6-14P-201ENST00000384630 106 ntBASIC3.94□□□□□ -1.78
PTPRMP28827 RAC1P3-201ENST00000416129 580 ntBASIC3.94□□□□□ -1.78
PTPRMP28827 MORF4L1P6-201ENST00000418771 268 ntBASIC3.94□□□□□ -1.78
PTPRMP28827 AC048351.1-201ENST00000420064 602 ntBASIC3.94□□□□□ -1.78
PTPRMP28827 AL592045.1-201ENST00000429867 352 ntBASIC3.94□□□□□ -1.78
PTPRMP28827 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC3.94□□□□□ -1.78
PTPRMP28827 RN7SL633P-201ENST00000488974 297 ntBASIC3.94□□□□□ -1.78
PTPRMP28827 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC3.94□□□□□ -1.78
PTPRMP28827 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.94□□□□□ -1.78
PTPRMP28827 AC008716.1-201ENST00000511084 513 ntBASIC3.94□□□□□ -1.78
PTPRMP28827 SNORA64.4-201ENST00000516632 81 ntBASIC3.94□□□□□ -1.78
PTPRMP28827 AC004696.1-201ENST00000614345 607 ntBASIC3.94□□□□□ -1.78
PTPRMP28827 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.94□□□□□ -1.78
PTPRMP28827 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
PTPRMP28827 Y_RNA.140-201ENST00000363474 103 ntBASIC3.93□□□□□ -1.78
PTPRMP28827 AL138878.1-201ENST00000405131 347 ntBASIC3.93□□□□□ -1.78
PTPRMP28827 RN7SKP285-201ENST00000410137 318 ntBASIC3.93□□□□□ -1.78
PTPRMP28827 RNA5SP107-201ENST00000411358 122 ntBASIC3.93□□□□□ -1.78
PTPRMP28827 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC3.93□□□□□ -1.78
PTPRMP28827 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC3.93□□□□□ -1.78
PTPRMP28827 AC078817.1-201ENST00000492623 435 ntBASIC3.93□□□□□ -1.78
PTPRMP28827 AC108729.3-201ENST00000513484 108 ntBASIC3.93□□□□□ -1.78
PTPRMP28827 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.93□□□□□ -1.78
PTPRMP28827 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.93□□□□□ -1.78
PTPRMP28827 AC009163.5-201ENST00000575421 637 ntBASIC3.93□□□□□ -1.78
PTPRMP28827 AC022884.3-201ENST00000579571 248 ntBASIC3.93□□□□□ -1.78
PTPRMP28827 AP000919.1-202ENST00000581139 1264 ntBASIC3.93□□□□□ -1.78
PTPRMP28827 U7.8-201ENST00000619968 63 ntBASIC3.93□□□□□ -1.78
PTPRMP28827 AC006111.3-201ENST00000622137 383 ntBASIC3.93□□□□□ -1.78
PTPRMP28827 AC005539.1-201ENST00000443768 1479 ntBASIC3.93□□□□□ -1.78
PTPRMP28827 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
PTPRMP28827 MTND4P10-201ENST00000446199 1363 ntBASIC3.93□□□□□ -1.78
PTPRMP28827 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
PTPRMP28827 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.93□□□□□ -1.78
PTPRMP28827 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.92□□□□□ -1.78
PTPRMP28827 RPS12P2-201ENST00000439728 269 ntBASIC3.92□□□□□ -1.78
PTPRMP28827 OR6K1P-201ENST00000456766 971 ntBASIC3.92□□□□□ -1.78
PTPRMP28827 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.92□□□□□ -1.78
PTPRMP28827 RNU6-1053P-201ENST00000515930 101 ntBASIC3.92□□□□□ -1.78
PTPRMP28827 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.92□□□□□ -1.78
PTPRMP28827 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.92□□□□□ -1.78
PTPRMP28827 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.92□□□□□ -1.78
PTPRMP28827 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC3.92□□□□□ -1.78
PTPRMP28827 TP73-AS1.1-201ENST00000611447 161 ntBASIC3.92□□□□□ -1.78
PTPRMP28827 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.92□□□□□ -1.78
PTPRMP28827 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
PTPRMP28827 RNU6-253P-201ENST00000384730 105 ntBASIC3.92□□□□□ -1.78
PTPRMP28827 MIR181A2-201ENST00000384863 110 ntBASIC3.92□□□□□ -1.78
PTPRMP28827 RNA5SP274-201ENST00000410484 108 ntBASIC3.92□□□□□ -1.78
PTPRMP28827 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC3.92□□□□□ -1.78
PTPRMP28827 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.92□□□□□ -1.78
PTPRMP28827 AC245517.4-201ENST00000448601 281 ntBASIC3.92□□□□□ -1.78
PTPRMP28827 AC003982.1-202ENST00000469928 248 ntBASIC3.92□□□□□ -1.78
PTPRMP28827 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC3.92□□□□□ -1.78
PTPRMP28827 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.92□□□□□ -1.78
PTPRMP28827 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC3.92□□□□□ -1.78
PTPRMP28827 LINC00901.1-201ENST00000617252 152 ntBASIC3.92□□□□□ -1.78
PTPRMP28827 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC3.92□□□□□ -1.78
PTPRMP28827 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC3.91□□□□□ -1.78
PTPRMP28827 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
PTPRMP28827 AMD1P2-201ENST00000412936 992 ntBASIC3.91□□□□□ -1.78
PTPRMP28827 AC245054.2-201ENST00000415639 319 ntBASIC3.91□□□□□ -1.78
PTPRMP28827 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC3.91□□□□□ -1.78
PTPRMP28827 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC3.91□□□□□ -1.78
PTPRMP28827 AC105402.2-201ENST00000438503 358 ntBASIC3.91□□□□□ -1.78
PTPRMP28827 AC096638.1-201ENST00000444678 216 ntBASIC3.91□□□□□ -1.78
PTPRMP28827 RPS26P24-201ENST00000497656 331 ntBASIC3.91□□□□□ -1.78
PTPRMP28827 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC3.91□□□□□ -1.78
PTPRMP28827 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
PTPRMP28827 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.91□□□□□ -1.78
PTPRMP28827 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms