Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 AL121821.2-201ENST00000556081 394 ntBASIC6.22□□□□□ -1.41
RXRBP28702 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC6.22□□□□□ -1.41
RXRBP28702 AC020661.2-201ENST00000560114 134 ntBASIC6.22□□□□□ -1.41
RXRBP28702 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC6.22□□□□□ -1.41
RXRBP28702 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC6.22□□□□□ -1.41
RXRBP28702 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC6.22□□□□□ -1.41
RXRBP28702 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC6.22□□□□□ -1.41
RXRBP28702 AL391646.1-201ENST00000603860 190 ntBASIC6.22□□□□□ -1.41
RXRBP28702 Z95327.3-201ENST00000610385 572 ntBASIC6.22□□□□□ -1.41
RXRBP28702 MIR6867-201ENST00000610636 67 ntBASIC6.22□□□□□ -1.41
RXRBP28702 AC005332.6-201ENST00000613178 446 ntBASIC6.22□□□□□ -1.41
RXRBP28702 AC007546.1-201ENST00000619452 559 ntBASIC6.22□□□□□ -1.41
RXRBP28702 LDHA-225ENST00000625635 141 ntTSL 5 BASIC6.22□□□□□ -1.41
RXRBP28702 MKKS-204ENST00000639674 192 ntBASIC6.22□□□□□ -1.41
RXRBP28702 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC6.22□□□□□ -1.41
RXRBP28702 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC6.22□□□□□ -1.41
RXRBP28702 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
RXRBP28702 AC108467.2-201ENST00000617640 1597 ntBASIC6.22□□□□□ -1.41
RXRBP28702 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
RXRBP28702 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC6.21□□□□□ -1.41
RXRBP28702 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC6.21□□□□□ -1.41
RXRBP28702 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
RXRBP28702 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
RXRBP28702 TEK-205ENST00000615002 4666 ntTSL 5 BASIC6.21□□□□□ -1.41
RXRBP28702 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC6.21□□□□□ -1.42
RXRBP28702 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC6.21□□□□□ -1.42
RXRBP28702 SNORA63C-201ENST00000364578 129 ntBASIC6.21□□□□□ -1.42
RXRBP28702 RNU6-767P-201ENST00000384132 107 ntBASIC6.21□□□□□ -1.42
RXRBP28702 RNU6-452P-201ENST00000384406 107 ntBASIC6.21□□□□□ -1.42
RXRBP28702 AC104297.1-201ENST00000393779 870 ntBASIC6.21□□□□□ -1.42
RXRBP28702 HMGB1P11-201ENST00000413899 637 ntBASIC6.21□□□□□ -1.42
RXRBP28702 AL356095.1-201ENST00000417217 199 ntBASIC6.21□□□□□ -1.42
RXRBP28702 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC6.21□□□□□ -1.42
RXRBP28702 USP9YP36-201ENST00000424581 829 ntBASIC6.21□□□□□ -1.42
RXRBP28702 SDCBPP2-201ENST00000424643 885 ntBASIC6.21□□□□□ -1.42
RXRBP28702 NDUFB4P8-201ENST00000435351 367 ntBASIC6.21□□□□□ -1.42
RXRBP28702 AC093716.1-201ENST00000435923 377 ntBASIC6.21□□□□□ -1.42
RXRBP28702 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC6.21□□□□□ -1.42
RXRBP28702 CALM1P1-201ENST00000442082 433 ntBASIC6.21□□□□□ -1.42
RXRBP28702 AL162151.2-201ENST00000448875 158 ntBASIC6.21□□□□□ -1.42
RXRBP28702 AC239798.3-201ENST00000454459 408 ntBASIC6.21□□□□□ -1.42
RXRBP28702 AC233279.1-201ENST00000455300 423 ntBASIC6.21□□□□□ -1.42
RXRBP28702 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC6.21□□□□□ -1.42
RXRBP28702 AC010486.1-201ENST00000511793 424 ntBASIC6.21□□□□□ -1.42
RXRBP28702 IGHV3-63-201ENST00000518422 341 ntBASIC6.21□□□□□ -1.42
RXRBP28702 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC6.21□□□□□ -1.42
RXRBP28702 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC6.21□□□□□ -1.42
RXRBP28702 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC6.21□□□□□ -1.42
RXRBP28702 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC6.21□□□□□ -1.42
RXRBP28702 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC6.21□□□□□ -1.42
RXRBP28702 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC6.21□□□□□ -1.42
RXRBP28702 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC6.21□□□□□ -1.42
RXRBP28702 NRBF2P5-201ENST00000603087 788 ntBASIC6.21□□□□□ -1.42
RXRBP28702 RNU6-88P-201ENST00000606801 100 ntBASIC6.21□□□□□ -1.42
RXRBP28702 AL158801.5-201ENST00000623123 465 ntBASIC6.21□□□□□ -1.42
RXRBP28702 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
RXRBP28702 TLK1P1-201ENST00000456760 2440 ntBASIC6.21□□□□□ -1.42
RXRBP28702 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
RXRBP28702 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
RXRBP28702 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC6.21□□□□□ -1.42
RXRBP28702 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC6.21□□□□□ -1.42
RXRBP28702 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
RXRBP28702 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
RXRBP28702 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC6.21□□□□□ -1.42
RXRBP28702 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC6.21□□□□□ -1.42
RXRBP28702 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
RXRBP28702 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
RXRBP28702 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC6.2□□□□□ -1.42
RXRBP28702 AC021146.4-201ENST00000309229 279 ntBASIC6.2□□□□□ -1.42
RXRBP28702 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
RXRBP28702 MIR606-201ENST00000384851 96 ntBASIC6.2□□□□□ -1.42
RXRBP28702 MIR659-201ENST00000384963 97 ntBASIC6.2□□□□□ -1.42
RXRBP28702 MT-TP-201ENST00000387461 68 ntBASIC6.2□□□□□ -1.42
RXRBP28702 RNU6-907P-201ENST00000390924 102 ntBASIC6.2□□□□□ -1.42
RXRBP28702 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC6.2□□□□□ -1.42
RXRBP28702 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC6.2□□□□□ -1.42
RXRBP28702 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
RXRBP28702 AL035410.1-201ENST00000427409 427 ntBASIC6.2□□□□□ -1.42
RXRBP28702 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC6.2□□□□□ -1.42
RXRBP28702 AL445584.1-201ENST00000431451 330 ntBASIC6.2□□□□□ -1.42
RXRBP28702 RPS17P8-201ENST00000434525 335 ntBASIC6.2□□□□□ -1.42
RXRBP28702 VN1R105P-201ENST00000486595 910 ntBASIC6.2□□□□□ -1.42
RXRBP28702 RPL36AP41-201ENST00000493820 306 ntBASIC6.2□□□□□ -1.42
RXRBP28702 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
RXRBP28702 KCTD9P2-201ENST00000512203 1013 ntBASIC6.2□□□□□ -1.42
RXRBP28702 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC6.2□□□□□ -1.42
RXRBP28702 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC6.2□□□□□ -1.42
RXRBP28702 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC6.2□□□□□ -1.42
RXRBP28702 HIF1AP1-201ENST00000553642 175 ntBASIC6.2□□□□□ -1.42
RXRBP28702 AL390334.1-201ENST00000556395 450 ntBASIC6.2□□□□□ -1.42
RXRBP28702 NDUFB4P11-201ENST00000560510 395 ntBASIC6.2□□□□□ -1.42
RXRBP28702 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC6.2□□□□□ -1.42
RXRBP28702 VN1R80P-201ENST00000597126 338 ntBASIC6.2□□□□□ -1.42
RXRBP28702 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC6.2□□□□□ -1.42
RXRBP28702 AL133255.1-201ENST00000606374 441 ntBASIC6.2□□□□□ -1.42
RXRBP28702 SNORA51-201ENST00000606420 132 ntBASIC6.2□□□□□ -1.42
RXRBP28702 RNU6ATAC35P-201ENST00000609276 444 ntBASIC6.2□□□□□ -1.42
RXRBP28702 RMST_3.1-201ENST00000611651 109 ntBASIC6.2□□□□□ -1.42
RXRBP28702 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
RXRBP28702 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC6.2□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms