Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC6.29□□□□□ -1.4
RFX1P22670 MIR4293-201ENST00000584305 78 ntBASIC6.29□□□□□ -1.4
RFX1P22670 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC6.29□□□□□ -1.4
RFX1P22670 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC6.29□□□□□ -1.4
RFX1P22670 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC6.29□□□□□ -1.4
RFX1P22670 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
RFX1P22670 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
RFX1P22670 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
RFX1P22670 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
RFX1P22670 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
RFX1P22670 AC090971.4-201ENST00000560291 1800 ntBASIC6.29□□□□□ -1.4
RFX1P22670 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
RFX1P22670 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC6.28□□□□□ -1.4
RFX1P22670 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
RFX1P22670 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.28□□□□□ -1.4
RFX1P22670 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
RFX1P22670 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC6.28□□□□□ -1.4
RFX1P22670 RNU6-522P-201ENST00000364497 107 ntBASIC6.28□□□□□ -1.4
RFX1P22670 Y_RNA.387-201ENST00000383918 102 ntBASIC6.28□□□□□ -1.4
RFX1P22670 RNU6-1029P-201ENST00000384109 107 ntBASIC6.28□□□□□ -1.4
RFX1P22670 SNORA70-201ENST00000384436 135 ntBASIC6.28□□□□□ -1.4
RFX1P22670 RNU11-201ENST00000387069 134 ntBASIC6.28□□□□□ -1.4
RFX1P22670 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
RFX1P22670 RNA5SP91-201ENST00000390902 119 ntBASIC6.28□□□□□ -1.4
RFX1P22670 AL109755.1-201ENST00000401791 649 ntBASIC6.28□□□□□ -1.4
RFX1P22670 AL606923.1-201ENST00000406616 190 ntBASIC6.28□□□□□ -1.4
RFX1P22670 RNA5SP107-201ENST00000411358 122 ntBASIC6.28□□□□□ -1.4
RFX1P22670 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC6.28□□□□□ -1.4
RFX1P22670 AL359265.2-201ENST00000434367 631 ntBASIC6.28□□□□□ -1.4
RFX1P22670 AC010655.1-201ENST00000449336 292 ntBASIC6.28□□□□□ -1.4
RFX1P22670 TPT1P13-201ENST00000449760 499 ntBASIC6.28□□□□□ -1.4
RFX1P22670 HMGB3P21-201ENST00000452483 547 ntBASIC6.28□□□□□ -1.4
RFX1P22670 AL590639.1-201ENST00000456484 337 ntBASIC6.28□□□□□ -1.4
RFX1P22670 RNU7-180P-201ENST00000459240 63 ntBASIC6.28□□□□□ -1.4
RFX1P22670 RPS27AP1-201ENST00000475545 471 ntBASIC6.28□□□□□ -1.4
RFX1P22670 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC6.28□□□□□ -1.4
RFX1P22670 GLUD1P3-202ENST00000508551 200 ntBASIC6.28□□□□□ -1.4
RFX1P22670 KLHL2P1-201ENST00000508691 521 ntBASIC6.28□□□□□ -1.4
RFX1P22670 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC6.28□□□□□ -1.4
RFX1P22670 Y_RNA.665-201ENST00000516177 98 ntBASIC6.28□□□□□ -1.4
RFX1P22670 RNA5SP92-201ENST00000516437 110 ntBASIC6.28□□□□□ -1.4
RFX1P22670 MRPS16P1-201ENST00000523462 412 ntBASIC6.28□□□□□ -1.4
RFX1P22670 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC6.28□□□□□ -1.4
RFX1P22670 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC6.28□□□□□ -1.4
RFX1P22670 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC6.28□□□□□ -1.4
RFX1P22670 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC6.28□□□□□ -1.4
RFX1P22670 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC6.28□□□□□ -1.4
RFX1P22670 AC067852.4-201ENST00000590314 478 ntBASIC6.28□□□□□ -1.4
RFX1P22670 BNIP3P22-201ENST00000593399 556 ntBASIC6.28□□□□□ -1.4
RFX1P22670 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
RFX1P22670 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
RFX1P22670 AL360012.1-201ENST00000602813 131 ntBASIC6.28□□□□□ -1.4
RFX1P22670 AC008638.3-201ENST00000603341 463 ntBASIC6.28□□□□□ -1.4
RFX1P22670 AL022099.1-201ENST00000604551 712 ntBASIC6.28□□□□□ -1.4
RFX1P22670 AC104695.2-201ENST00000605056 775 ntBASIC6.28□□□□□ -1.4
RFX1P22670 AL136313.1-201ENST00000624804 202 ntBASIC6.28□□□□□ -1.4
RFX1P22670 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC6.28□□□□□ -1.4
RFX1P22670 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
RFX1P22670 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC6.28□□□□□ -1.4
RFX1P22670 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
RFX1P22670 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
RFX1P22670 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
RFX1P22670 ZNF736P3Y-201ENST00000428264 1465 ntBASIC6.28□□□□□ -1.4
RFX1P22670 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
RFX1P22670 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.4
RFX1P22670 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
RFX1P22670 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
RFX1P22670 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
RFX1P22670 RNU6-179P-201ENST00000363350 107 ntBASIC6.27□□□□□ -1.41
RFX1P22670 Y_RNA.530-201ENST00000384587 101 ntBASIC6.27□□□□□ -1.41
RFX1P22670 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
RFX1P22670 RNA5SP56-201ENST00000410277 118 ntBASIC6.27□□□□□ -1.41
RFX1P22670 RNU2-47P-201ENST00000410649 186 ntBASIC6.27□□□□□ -1.41
RFX1P22670 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC6.27□□□□□ -1.41
RFX1P22670 RPS7P15-201ENST00000415804 584 ntBASIC6.27□□□□□ -1.41
RFX1P22670 PSMA2P3-201ENST00000429685 675 ntBASIC6.27□□□□□ -1.41
RFX1P22670 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC6.27□□□□□ -1.41
RFX1P22670 IGHV5-78-201ENST00000450948 295 ntBASIC6.27□□□□□ -1.41
RFX1P22670 MEMO1P4-201ENST00000453590 386 ntBASIC6.27□□□□□ -1.41
RFX1P22670 AC004453.1-201ENST00000487895 408 ntBASIC6.27□□□□□ -1.41
RFX1P22670 RPS15AP36-201ENST00000492022 382 ntBASIC6.27□□□□□ -1.41
RFX1P22670 MTCO1P29-201ENST00000496868 288 ntBASIC6.27□□□□□ -1.41
RFX1P22670 MTND5P5-201ENST00000503764 376 ntBASIC6.27□□□□□ -1.41
RFX1P22670 AC108043.1-201ENST00000512696 574 ntBASIC6.27□□□□□ -1.41
RFX1P22670 HIGD1AP3-201ENST00000515857 278 ntBASIC6.27□□□□□ -1.41
RFX1P22670 RN7SKP13-201ENST00000515933 244 ntBASIC6.27□□□□□ -1.41
RFX1P22670 AP005597.4-201ENST00000526762 229 ntBASIC6.27□□□□□ -1.41
RFX1P22670 DEFB108D-201ENST00000527787 222 ntBASIC6.27□□□□□ -1.41
RFX1P22670 ARL6IP1P1-201ENST00000545836 610 ntBASIC6.27□□□□□ -1.41
RFX1P22670 CR383656.7-201ENST00000548164 174 ntBASIC6.27□□□□□ -1.41
RFX1P22670 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
RFX1P22670 MIR4700-201ENST00000578311 74 ntBASIC6.27□□□□□ -1.41
RFX1P22670 FO393422.1-201ENST00000603908 708 ntBASIC6.27□□□□□ -1.41
RFX1P22670 AC133644.2-201ENST00000608142 540 ntBASIC6.27□□□□□ -1.41
RFX1P22670 AC011155.2-201ENST00000623202 216 ntBASIC6.27□□□□□ -1.41
RFX1P22670 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
RFX1P22670 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC6.27□□□□□ -1.41
RFX1P22670 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
RFX1P22670 AL359955.1-201ENST00000455242 3275 ntBASIC6.27□□□□□ -1.41
RFX1P22670 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC6.27□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 154.7 ms