Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 AL390023.1-201ENST00000428836 262 ntBASIC3.45□□□□□ -1.86
TPM1P09493 GOT2P5-201ENST00000433995 546 ntBASIC3.45□□□□□ -1.86
TPM1P09493 MRPS33P4-201ENST00000434892 317 ntBASIC3.45□□□□□ -1.86
TPM1P09493 AC122718.1-201ENST00000439448 744 ntBASIC3.45□□□□□ -1.86
TPM1P09493 XKRYP6-201ENST00000440468 1116 ntBASIC3.45□□□□□ -1.86
TPM1P09493 XKRYP3-201ENST00000442113 1116 ntBASIC3.45□□□□□ -1.86
TPM1P09493 RPS12P18-201ENST00000442381 270 ntBASIC3.45□□□□□ -1.86
TPM1P09493 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.45□□□□□ -1.86
TPM1P09493 AC073522.1-201ENST00000483312 377 ntBASIC3.45□□□□□ -1.86
TPM1P09493 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
TPM1P09493 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
TPM1P09493 AC010306.1-201ENST00000523223 1117 ntBASIC3.45□□□□□ -1.86
TPM1P09493 HAUS1P3-201ENST00000523909 662 ntBASIC3.45□□□□□ -1.86
TPM1P09493 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.45□□□□□ -1.86
TPM1P09493 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.45□□□□□ -1.86
TPM1P09493 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.45□□□□□ -1.86
TPM1P09493 MTCO3P24-201ENST00000572729 782 ntBASIC3.45□□□□□ -1.86
TPM1P09493 MIR4700-201ENST00000578311 74 ntBASIC3.45□□□□□ -1.86
TPM1P09493 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.45□□□□□ -1.86
TPM1P09493 AC244258.1-201ENST00000637553 1071 ntBASIC3.45□□□□□ -1.86
TPM1P09493 AL392088.2-201ENST00000637607 285 ntBASIC3.45□□□□□ -1.86
TPM1P09493 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.45□□□□□ -1.86
TPM1P09493 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
TPM1P09493 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
TPM1P09493 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
TPM1P09493 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
TPM1P09493 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.44□□□□□ -1.86
TPM1P09493 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
TPM1P09493 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC3.44□□□□□ -1.86
TPM1P09493 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
TPM1P09493 RPL23AP57-201ENST00000332361 466 ntBASIC3.44□□□□□ -1.86
TPM1P09493 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.44□□□□□ -1.86
TPM1P09493 RNU1-101P-201ENST00000391171 127 ntBASIC3.44□□□□□ -1.86
TPM1P09493 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
TPM1P09493 DSTNP4-201ENST00000399472 474 ntBASIC3.44□□□□□ -1.86
TPM1P09493 AL591034.1-201ENST00000407447 340 ntBASIC3.44□□□□□ -1.86
TPM1P09493 RNU4-65P-201ENST00000410473 140 ntBASIC3.44□□□□□ -1.86
TPM1P09493 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC3.44□□□□□ -1.86
TPM1P09493 MRPL50P2-201ENST00000416821 482 ntBASIC3.44□□□□□ -1.86
TPM1P09493 HSPE1P1-201ENST00000421494 318 ntBASIC3.44□□□□□ -1.86
TPM1P09493 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC3.44□□□□□ -1.86
TPM1P09493 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC3.44□□□□□ -1.86
TPM1P09493 HSPD1P21-201ENST00000436541 245 ntBASIC3.44□□□□□ -1.86
TPM1P09493 RPL36AP33-201ENST00000450395 310 ntBASIC3.44□□□□□ -1.86
TPM1P09493 ELOCP23-201ENST00000452014 332 ntBASIC3.44□□□□□ -1.86
TPM1P09493 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.44□□□□□ -1.86
TPM1P09493 MRPL35P4-201ENST00000453682 566 ntBASIC3.44□□□□□ -1.86
TPM1P09493 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.44□□□□□ -1.86
TPM1P09493 PRDX3P4-201ENST00000470828 747 ntBASIC3.44□□□□□ -1.86
TPM1P09493 AC108157.1-201ENST00000510511 539 ntBASIC3.44□□□□□ -1.86
TPM1P09493 SNORA31.20-201ENST00000517111 133 ntBASIC3.44□□□□□ -1.86
TPM1P09493 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC3.44□□□□□ -1.86
TPM1P09493 C1DP5-201ENST00000525775 383 ntBASIC3.44□□□□□ -1.86
TPM1P09493 RGS4-207ENST00000527809 817 ntTSL 4 BASIC3.44□□□□□ -1.86
TPM1P09493 MIR5186-201ENST00000577504 120 ntBASIC3.44□□□□□ -1.86
TPM1P09493 AC090312.2-201ENST00000582687 378 ntBASIC3.44□□□□□ -1.86
TPM1P09493 CBX3P2-202ENST00000583365 535 ntBASIC3.44□□□□□ -1.86
TPM1P09493 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC3.44□□□□□ -1.86
TPM1P09493 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.44□□□□□ -1.86
TPM1P09493 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.44□□□□□ -1.86
TPM1P09493 U6.107-201ENST00000637108 79 ntBASIC3.44□□□□□ -1.86
TPM1P09493 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
TPM1P09493 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
TPM1P09493 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
TPM1P09493 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.44□□□□□ -1.86
TPM1P09493 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
TPM1P09493 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.43□□□□□ -1.86
TPM1P09493 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
TPM1P09493 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
TPM1P09493 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.43□□□□□ -1.86
TPM1P09493 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.43□□□□□ -1.86
TPM1P09493 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
TPM1P09493 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
TPM1P09493 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
TPM1P09493 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
TPM1P09493 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
TPM1P09493 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
TPM1P09493 RNU6ATAC-201ENST00000408749 126 ntBASIC3.43□□□□□ -1.86
TPM1P09493 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC3.43□□□□□ -1.86
TPM1P09493 RN7SKP159-201ENST00000410657 292 ntBASIC3.43□□□□□ -1.86
TPM1P09493 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.43□□□□□ -1.86
TPM1P09493 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC3.43□□□□□ -1.86
TPM1P09493 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC3.43□□□□□ -1.86
TPM1P09493 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC3.43□□□□□ -1.86
TPM1P09493 RPL21P2-201ENST00000440049 481 ntBASIC3.43□□□□□ -1.86
TPM1P09493 AC092685.1-201ENST00000447960 1243 ntBASIC3.43□□□□□ -1.86
TPM1P09493 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
TPM1P09493 RPL23AP15-201ENST00000450202 459 ntBASIC3.43□□□□□ -1.86
TPM1P09493 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.43□□□□□ -1.86
TPM1P09493 SNORD59.2-201ENST00000516873 68 ntBASIC3.43□□□□□ -1.86
TPM1P09493 RNU6-711P-201ENST00000517255 106 ntBASIC3.43□□□□□ -1.86
TPM1P09493 PAICSP4-201ENST00000517543 1253 ntBASIC3.43□□□□□ -1.86
TPM1P09493 IGKV2D-36-201ENST00000518643 226 ntBASIC3.43□□□□□ -1.86
TPM1P09493 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
TPM1P09493 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.43□□□□□ -1.86
TPM1P09493 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC3.43□□□□□ -1.86
TPM1P09493 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC3.43□□□□□ -1.86
TPM1P09493 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC3.43□□□□□ -1.86
TPM1P09493 AC010653.1-201ENST00000571108 881 ntBASIC3.43□□□□□ -1.86
TPM1P09493 VN1R85P-201ENST00000601587 426 ntBASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 116.1 ms